Brassica napus (rape): 106389017
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Entry
106389017 CDS
T04128
Name
(RefSeq) protein transport protein Sec24-like At3g07100
KO
K14007
protein transport protein SEC24
Organism
bna
Brassica napus (rape)
Pathway
bna04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
106389017
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bna04131
]
106389017
Membrane trafficking [BR:
bna04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
106389017
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_BS
Sec23_helical
zf-Sec23_Sec24
Gelsolin
Vps36-NZF-N
HVO_2753_ZBP
Motif
Other DBs
NCBI-GeneID:
106389017
NCBI-ProteinID:
XP_013684657
UniProt:
A0A816VYA5
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Position
A3:complement(16014602..16020005)
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AA seq
981 aa
AA seq
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MNTENQGYPNFPARPPPSSSSPFASAPPPGVPTQSGGPESVGFRPPTRPFTPSGPPMAPP
VGVMRPFQPPLVSQIPGQGIRPPPPPPSSNSFPSTAYGPPGGGSFQRFPTPPPSGPPTTQ
TLAGHFSPPMQPMGPPSQSMTSGVPGGYASPPVTGFQQSMPSVNPSYPGVGGPQPSFPPS
SYPPQTGGFAQPPGQQNLHPSYAPPTSNVQGLAEDFNSLSLTNIPGSLEPGLDPASFPRP
LDGDVEPNTFAEMYPMNCHSRYLRLTTSAIPSSQSLASRWHLPLGAVVCPLAEAPEGEEV
TLIDFGSSGIIRCRRCRTYVNPYVTFTDSGRKWRCNICSMLNDVPGEYFSHLDATGRRMD
LDQRPELTKGSVEIIAPTEYMVRPPMPPIYFFLIDVSFSAAKSGMLEVAAQTIKSCLDNL
PGYPRTQIGFITYDSTLHFYNMKSSLSQPQMMVVSDLDDIFVPLPDDLLVNLSESRNVVE
AFLDSLPLMFQNNVNVESAFGPSLKAAYMVMNQLGGKLLIFQNSLPSLGAGRLKLRGDDP
RVYGTEKEYTLRVAEDNFYKQMAADCTKFQIGINVYAFSDKYTDIASLGTLAKYTGGQVY
YYPGFQSSIHGDKLRHELARDLTRETAWESVMRIRCGKGIRFSSYHGNFMLRSTDLIALP
AVDCDKAYAMQLTLEETLLTTPTVYFQVALLYTASCGERRIRVHTAVAPVVTDLGEMYRQ
ADTGSILSVYTRLAIEKTLSGKLDDARNAIQQKIVKALREYRNLHSVQHRLGSRLIYPES
LKFLPLYGLAICKSTPLQGGPADASLDERCAAGFTMMALPVKNLLKLLYPNLFRVDEWLL
KPSADLDDLKDVLRRVPLAAQSLDSRGLYIYDDGFLLVLWFGRMLSPDIAKNLLGTDFAA
ELSRVTLQEQENGMSKKLMRLIKKVRENDPSYHPMCFLVRQGEQPREGFLFLRHLTEDQM
GGSTSYVDWILQIHRQVQQNA
NT seq
2946 nt
NT seq
+upstream
nt +downstream
nt
atgaatacggagaatcaaggctatccgaattttccagctaggcctcctccgtcttcctcc
tctccgttcgcatctgctccgccgccaggtgttccaactcaatccggtggaccagagagt
gttggctttaggccacctactaggccttttacaccttctggtcctcctatggctccacca
gtgggagtgatgaggcctttccagcctcctttggtttctcagattccaggtcaagggatt
agacctccacctccaccgccatcgtctaattcgtttccttcaacagcttatggtcctcct
ggtggcggctcttttcagcgttttccaactcctcctcctagtggtccaccaacaactcaa
acgcttgcgggtcacttctcgcctccaatgcaaccaatggggcctccgtcacaaagtatg
acttctggggtgcctggaggatatgcttctccccctgtgactggttttcaacagtccatg
ccttcagttaatccgtcgtatcctggtgttggtggtccacagccttcttttcctccgtca
tcatatcctcctcagacgggaggttttgctcagcctccaggacagcagaacctgcatccg
agctatgcacctccgacaagcaacgtacaaggcttggctgaagatttcaattcgctgtcc
cttacaaatattccggggtcgcttgagccaggacttgatccagcctcgtttccaaggcca
ttggatggtgacgtggagccaaatacgtttgccgaaatgtaccccatgaattgccattcc
agatatctacggctgacaactagtgctataccaagttcacagtctctggcgtcgaggtgg
catttgcctctaggagctgtggtttgtccacttgctgaggctcctgaaggggaggaagta
acacttattgattttggatcaagtggcatcatccgctgcagaagatgccgtacctatgtg
aatccttatgtgacctttacagattctggaagaaagtggcggtgtaatatttgttctatg
ctcaatgatgtacctggtgaatacttttcacatttggatgcaactggccgaagaatggac
ttggatcaacggcctgagctgacaaagggcagtgttgaaatcattgctccaacagaatac
atggttcggcctccgatgccacccatctacttcttcctcatcgatgtttcattttcagct
gctaaaagtgggatgcttgaggttgctgctcaaacgatcaagtcttgtttggataacctg
cctggttatcccagaactcaaattggatttattacttatgacagcactttacatttttac
aatatgaagtcatctttgagccaaccgcaaatgatggtggtttcagatctagatgatata
tttgtcccattaccggatgatctccttgtcaatctatctgaatctagaaatgtggtggaa
gcctttttagacagtctgcctctgatgtttcaaaataatgtcaatgtggaatcggctttt
ggtccatccctcaaagcggcgtacatggttatgaaccaacttggtggcaagctgctaatt
ttccagaactcgttaccttctctgggtgctgggcggttaaagttgcgcggagatgatcct
cgtgtctatggaactgaaaaagaatatactttaagggtagcggaagacaacttctataag
caaatggctgccgattgtaccaagttccagataggaattaatgtttatgcattcagtgat
aagtacactgatattgcctccttagggactctggctaaatacactggaggacaggtgtac
tattatccaggtttccaatcatctattcatggagataagttaagacacgaactggctaga
gaccttacaagggaaactgcttgggaatccgttatgcgaataagatgtggaaaaggaatt
cgtttctcttcctaccatgggaacttcatgctaaggtctactgacctgattgctcttcct
gctgttgactgtgacaaagcatatgcaatgcagctaactctggaagagacattgctaaca
accccgacggtgtatttccaagtcgctctactatatactgcttcttgcggagagaggcgt
ataagggtacacacagctgttgcaccagtggttacagatcttggagagatgtatagacaa
gcagacaccggttccattctctctgtatatactagattagcaattgagaaaactttgtcc
ggaaaactggatgatgcacggaatgctatacagcaaaagattgttaaagctttaagagag
tatcgtaatcttcactcggtgcagcatcggttggggtctagattaatatacccagagtct
ctgaagttcttgccattgtacggactggcaatttgtaagtccactcctcttcaaggtgga
cctgctgatgcttcacttgacgagcgctgtgcagcaggtttcaccatgatggctctgcct
gtcaaaaatctattgaaactgttatatcccaatttattccgtgttgacgagtggctctta
aagccatcagcagaccttgatgacctcaaggacgtactaaggagagtgcctctggctgct
cagagtttggattctagaggactttacatatatgatgatggttttctattggttttgtgg
tttggccggatgctttcacctgacattgctaaaaatcttcttggaactgactttgcagca
gagctctcaagggttacactgcaggagcaagagaatgggatgtcaaagaagctaatgaga
ctgataaagaaagtgagggagaatgatccgtcgtatcatcccatgtgtttcctagtgagg
caaggagaacaaccccgagaaggcttccttttcctccgtcatctcactgaagaccagatg
ggtggttctactagttatgttgattggattctgcaaattcaccgccaagtccaacaaaat
gcgtga
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