Brassica napus (rape): 106390769
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Entry
106390769 CDS
T04128
Name
(RefSeq) protein transport protein SEC23-like
KO
K14006
protein transport protein SEC23
Organism
bna
Brassica napus (rape)
Pathway
bna04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
106390769
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bna04131
]
106390769
Membrane trafficking [BR:
bna04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
106390769
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_helical
Sec23_BS
Gelsolin
zf-Sec23_Sec24
Vps36-NZF-N
Motif
Other DBs
NCBI-GeneID:
106390769
NCBI-ProteinID:
XP_048610216
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All DBs
Position
C4:complement(39548035..39552946)
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AA seq
775 aa
AA seq
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MAEMANMDPEGMDGVRMTWNVWPRTKVEASKCVIPLAASISPIRRHSEIPSLPYAPLKCR
TCVAVLNAFARVDFAAKIWICPFCFQRNPFPPHYHMISETNLPGELYPQYTTVEYALPST
AGQFDPRTGAAPPQTPPPVFVFVLDTCMIEEELGFAKSALKQAIGLLPENALVGFASFGT
QAHVHELGFSEMSKVFVFKGNKEVSKDHVLDQLGLSSRRAPSSGFPKGAQNGFQSAAGVN
RFLLPASDCEYTLDLLLDELQTDQWPVQPGHRPQRCTGVALSVAAGLLGACLPGTGARIV
ALVGGPCTEGPGTIISKDLSDPVRSHKDLDKDAAPYYKKAVKFYDSIAKQLVAQGHVLDL
FASALDQVGVAEMKVAVESTGGLVVLSESFGHSVFKDSFKRVFEDGEQSLGLCSNGTLEI
NCSKDIKIQGAIGPCSSLEKKGPSVADTVIGEGNTNAWKLCGLDKSTCLTVFFDLSSTGL
NAPGTVNPQFYLQFLTSYQNPEGQTLLRVTTITRQWVDTAVSTEELVQGFDQETAAVVMA
RLASFKMETEEGFDATRWLDRTLIRLCSKFGDYRKDDPTSFTLNPYFSLFPQFMFNLRRS
QFVQVFNNSPDETAYFRMLLNRENISNATVMIQPSLTSYTFSSPPQPALLDVASIAADRI
LLLDAYFSVVVFHGMTIAQWRNMGYHEQPEHEAFAQLLQAPQEDSQMIVRERFPVPRLVV
CDQHGSQARFLLAKLNPSATYNNANEMSAGSDVIFTDDVSLQVFFEHLQKLAVQS
NT seq
2328 nt
NT seq
+upstream
nt +downstream
nt
atggcagagatggcgaacatggatcccgaaggcatggacggagttcgcatgacctggaac
gtctggcctcgcaccaaggtcgaagccagcaagtgcgtgatcccactcgccgcctcaatc
tccccgatccgtcgccactccgagatcccttctctcccttacgctcccctcaaatgccga
acctgcgtcgccgtcctcaacgcctttgcccgcgtcgatttcgccgccaagatctggatc
tgccctttctgcttccagaggaaccctttccctcctcactaccacatgatctccgagacc
aatctccccggcgagctttaccctcagtacactaccgttgagtacgcgcttccttccacc
gccggtcagttcgatcccagaaccggcgctgctccgcctcagacgcctcctcctgtgttc
gtctttgttctcgacacgtgtatgatcgaggaggagttggggttcgctaaatccgcgctt
aagcaggcgatcgggttgcttccggagaatgctttggtggggtttgcgtcttttggtacg
caggcccatgttcatgagctggggttctcggagatgtctaaagtctttgtctttaaaggg
aataaagaagtctccaaggatcacgttttggatcagttggggctttcctccaggagagct
ccctcttctgggtttcccaaaggagcgcaaaatgggttccagagtgctgctggtgtcaac
aggttcttgctacctgcctcggattgtgaatacacactggacttgcttttggatgagctg
caaacagaccagtggcctgttcagccaggtcatcgtccccaacgatgcactggtgtggcg
ttgagtgttgctgctggattgcttggagcttgcttgcctggaactggggctagaatcgtt
gctttggtcggaggtccatgtacagagggccctggaacgattatctcaaaggatttatca
gatcctgtgcggtctcacaaagatctagataaagatgctgccccttactataagaaagct
gtcaagttttatgatagtattgcaaagcaactggtcgctcagggtcatgtgttagacctg
ttcgcttccgcacttgatcaggttggggttgctgaaatgaaagttgcagttgaaagtacc
ggtggccttgttgttctatctgaaagttttgggcattccgtatttaaagattccttcaaa
cgggtgtttgaagatggcgagcagtctcttggcctctgctctaatggcacgcttgagatc
aattgctcaaaagatatcaaaattcaaggggctatcgggccttgctcgtcattagaaaag
aaaggtcccagtgttgccgacacagtcattggagaggggaataccaatgcttggaagtta
tgtggcctcgacaagagtacttgcttgacagttttctttgatctatcctcaaccgggtta
aatgctcctggaactgtaaatcctcagttttatttgcagtttcttacaagttaccaaaac
cctgaaggtcaaacattgctcagggttacaacaataaccagacagtgggtagatactgct
gtgagcactgaggaacttgtgcaaggctttgatcaagaaactgctgctgttgtcatggca
agattagcttcctttaaaatggaaaccgaggagggatttgatgctactcgatggctagat
cggactctcattcgtctgtgttcaaaattcggtgactatagaaaggatgacccaacctct
ttcacgctgaatccatatttttcattgttccctcaattcatgtttaacctgcggaggtca
cagtttgtccaggtctttaacaatagtccagatgaaactgcgtacttccgcatgttgcta
aaccgggagaatatttcgaatgcaacggtcatgatccaaccatcgctgacatcatataca
ttcagttcaccgcctcagccagctttgctggatgtggcttctattgcagccgacagaatt
cttctgttagatgcatattttagtgttgttgtcttccatggaatgactatagcacagtgg
cgaaacatgggttaccatgagcagcctgaacatgaggcctttgctcagctattgcaagct
ccccaagaggattcccagatgatagtccgggagcgtttccctgtcccgagattagttgtg
tgtgatcaacatggatctcaggcaaggtttttattggcaaagctgaatccatcagcgact
tataacaatgcaaacgagatgtcagctgggtctgatgtaatcttcactgacgacgtgagc
ctgcaagtcttttttgagcatctccaaaaactggccgtgcaatcctga
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