Brassica napus (rape): 106391495
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Entry
106391495 CDS
T04128
Name
(RefSeq) ABC transporter B family member 1
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
bna
Brassica napus (rape)
Pathway
bna02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
106391495
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
bna02000
]
106391495
04147 Exosome [BR:
bna04147
]
106391495
04090 CD molecules [BR:
bna04090
]
106391495
Enzymes [BR:
bna01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
106391495
Transporters [BR:
bna02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
106391495
Exosome [BR:
bna04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
106391495
CD molecules [BR:
bna04090
]
Proteins
106391495
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
Zeta_toxin
AAA_16
ABC_ATPase
AAA_22
AAA_29
RsgA_GTPase
AAA
AAA_5
nSTAND1
AAA_30
SbcC_Walker_B
AAA_15
APS_kinase
AAA_25
DUF87
Rad17
ECH_2
Motif
Other DBs
NCBI-GeneID:
106391495
NCBI-ProteinID:
XP_048611042
LinkDB
All DBs
Position
C4:58574502..58580332
Genome browser
AA seq
1338 aa
AA seq
DB search
MSQESVQTQEEEEIKSVEEQWRLSEMQGLDLLPEASSNTNNSKNPETELREHPPEMENNG
APPPPPPPPEPKKPEIRGVAFKELFRFADGLDYALMAIGSVGAFVHGCSLPLFLRFFADL
VNSFGSNANNVDKMMQEVLKYALYFLVVGAAIWASSWAEISCWMWTGERQTTKMRIKYLE
AALNQDIQFFDTEVRTSDVVSAINTDAVMVQDAISEKLGNFIHYMATFASGFIVGFTAVW
QLALVTLAVVPLIAVIGGIHTTTLSKLSNKSQESLSQAGNIVEQTVVQIRVVMAFVGETR
ASQAYSSALKTAQRLGYKTGLAKGMGLGATYFVVFCCYALLLWYGGYLVRHRLTNGGLAI
STMFAVMIGGLALGQSAPSMAAFAKAKVAAAKIFRIIDHRPTIERNSESGVELDSVTGLV
ELRNVDFSYPSRPDVKILNDFTLSVPAGKTIALVGSSGSGKSTVVSLIERFYDPASGQVL
LDGHDLKTLKLKWLRQQIGLVSQEPALFATSIRENILLGRPDADQVEIEEAARVANAHSF
IIKLPDGFDTQVGERGLQLSGGQKQRIAIARAMLKNPAILLLDEATSALDSESEKLVQEA
LDRFMIGRTTLIIAHRLSTIRKADLVAVLQQGSVSEIGTHDELFAKGENGVYSKLIKMQE
AAHETAMNNARKSSARQSSARNSVSSPIMTRNSSYGRSPYSRRLSDFSTTDFTLSIDASS
YPNYRHDKLPFKDQANSFLRLAKMNSPEWKYALLGSIGSVVCGSLSAFFAYVLSAVLSIY
YNPNHEYMIKQIGKYCYLLIGLSSTALIFNTLQHSFWDIVGENLTKRVREKMFTAVLKNE
MAWFDQEENESARISARLALDANNVRSAIGDRISVIVQNTALMLVACTAGFVLQWRLALV
LVAVFPVVVAATVLQKMFMTGFSGDLEAAHAKGTQLAGEAIANVRTVAAFNSEAKIVRLY
TANLEPPLKRCFWKGQIAGIGYGIAQFCLYASYALGLWYASWLVKHGISDFSKTIRVFMV
LMVSANGAAETLTLAPDFIKGGQAMRSVFELLDRKTEIEPDDPDTTPVPDRLRGEVELKH
IDFSYPSRPDIQVFRDLTLRARAGKTLALVGPSGCGKSSVISLVQRFYEPSSGRVMIDGK
DIRKYNLKALRKHIAIVPQEPCLFGTTIQENIAYGHECATEAEIIQAATLASAHKFISAL
PDGYKTYVGERGVQLSGGQKQRIAIARALVRKAEIMLLDEATSALDAESERSVQEALDQA
CSGRTSIVVAHRLSTIRNAHTIAVIDDGKVAEQGSHSQLLKNYPDGIYARMIQLQRFTHG
QVIGMTSGASSRVKEGDA
NT seq
4017 nt
NT seq
+upstream
nt +downstream
nt
atgtcccaagaatctgttcagacacaagaagaagaagaaataaagtcagtggaggaacaa
tggcgtttgtccgaaatgcaaggacttgaccttctccctgaagcttcctccaacaccaac
aactcaaaaaacccagaaacagagctccgggaacatccaccggaaatggaaaataacggt
gctcctcctcctcctcctcctcctccggagcccaagaaacctgagattcgtggagttgca
ttcaaagagcttttcagattcgcagacgggttagattacgcgctgatggcaattggctcc
gttggcgctttcgtccacggctgctctttgcctctgttcctcagattcttcgccgatctc
gttaactcctttggctctaacgctaacaacgtcgacaagatgatgcaagaagtcctaaag
tacgctctttacttcctcgtcgttggtgctgcgatctgggcttcctcctgggcagagatt
tcgtgctggatgtggactggagagagacaaaccacgaagatgaggattaagtacttagaa
gcagctttaaaccaagacattcagttcttcgacactgaggttcgaacttccgatgttgtc
tccgccatcaacaccgacgcagttatggtccaagacgccattagcgagaagttagggaac
ttcatccattacatggcgacttttgcgtccggattcatcgtgggattcacggcggtgtgg
cagctagctttagtgacactcgcggtggttccgttgatagctgtgatcggaggaatccac
accacaactctctctaagctctctaacaagagccaagagtctctttctcaagctggtaac
atcgtcgaacaaacagtggtgcaaatcagagtagttatggcgtttgtcggagagacgaga
gcctctcaagcttactcatcagctttgaagacagctcagagactcggttacaaaacaggt
ttagccaaaggaatgggacttggtgctacttacttcgtcgtcttctgttgctacgctctc
ttgctatggtacggtggctatctcgttcgccatcgtttgaccaacggtggtctcgctata
tccaccatgttcgccgtcatgatcggtggcttggcattgggacaatcagctccgagcatg
gctgcgtttgcgaaagctaaagttgctgctgcgaagatctttagaatcattgatcacagg
cctacgatagagcggaacagcgagtccggcgtggagctagactctgtcacgggcctagtc
gagcttagaaacgttgacttttcgtacccgtcgaggccagatgttaagatccttaacgac
tttaccctctctgtccccgccgggaagactatagctttggttgggagcagcggttcgggc
aaaagcacggtcgtttcgcttatcgagaggttttacgacccggcatcagggcaagtttta
ctagatgggcatgacttaaagacgcttaaacttaaatggttaaggcaacagatagggctt
gtgagccaagagccagcactgtttgccacttctatcagagagaacatactcttagggcgt
cctgacgctgatcaagtggagatagaggaggcagctcgtgtcgccaacgctcattccttt
atcatcaaactacctgatggcttcgacacacaggtaggggagagaggactacagctatca
ggtgggcagaaacaaagaatagccatagcaagagccatgttaaagaaccctgcgatactt
ctactagatgaggcgacgagtgcgttagattctgagtcagagaagcttgtgcaagaagct
ttggatcgtttcatgatcgggagaacgactctcatcattgctcatcgtctttccaccata
cgcaaagccgaccttgttgctgtccttcagcaaggaagtgtctctgagattggaacgcac
gacgagctttttgccaagggggagaatggtgtctactctaagcttatcaaaatgcaagag
gcagctcacgagaccgctatgaacaatgcaagaaagagtagtgcaagacagtcgagtgca
agaaactctgtgagctcaccaataatgacccggaactcttcatatggaagatcaccgtac
tcgcggagactctcagacttctcaactactgacttcaccctctccattgacgcctcttca
taccctaactatcgacacgataagctacccttcaaggaccaagccaactccttcttgcgc
ctagctaaaatgaactcaccagagtggaaatacgctctcctaggctctataggctctgtc
gtctgcggctcgctcagcgcgtttttcgcatacgtcctaagcgcggtccttagcatctac
tacaacccgaaccacgagtacatgatcaagcagattggtaagtactgttacctcttgatc
ggtctatcctcaacagcgcttatcttcaacacgctccagcattctttctgggacattgtc
ggtgagaacctgaccaagagggtccgtgagaagatgtttacggcggtgcttaagaacgag
atggcttggtttgatcaagaggagaatgagagtgcaagaatctcagcgaggttggctctt
gatgctaataacgtgaggtcagctataggagatagaatctcggtgattgtgcaaaacaca
gctttgatgcttgttgcttgtactgctggttttgttctgcaatggagactcgcattggtc
ttggtcgctgtcttccctgttgttgttgctgcaactgtcttacagaaaatgttcatgact
ggcttctctggagacctagaagcagcgcatgccaaggggacacagctcgctggtgaagcc
atagctaacgtcaggacagtcgctgccttcaactcagaggcaaagattgttcgtctctac
accgcaaacctcgagccacctttgaaacgctgcttctggaaaggacagatcgctggaatt
ggctacggtattgcacagttctgtctctacgcatcttacgctctagggctatggtacgcg
tcgtggcttgtgaaacacggcatctccgacttctccaaaaccattagagtcttcatggtc
cttatggtctcagccaacggtgcagcagagacactcactttagctcctgatttcatcaaa
ggtggtcaggctatgcggtcggttttcgagcttcttgaccgaaaaaccgaaatcgaaccg
gatgatcccgataccaccccggttccagaccggttacgcggcgaggtggagctcaaacac
attgacttctcttacccttcgagaccagacattcaagtcttccgtgacctaaccctccgt
gctagagccggcaagactctagctcttgtcggccctagcgggtgcggtaaaagctcagtg
atctcccttgtacaaagattctacgagccgtcctcagggcgggtcatgatcgacggcaaa
gacataagaaagtacaatctcaaagccctaaggaaacacatagccatagtccctcaagag
ccgtgcctattcggaacaaccattcaagaaaacatagcgtacggacacgaatgcgccacg
gaggcagagatcatacaagccgcaacgttagccagcgcgcacaagttcatatccgcgttg
cccgatggatacaagacgtatgtaggcgagagaggcgttcagctctcgggagggcagaag
cagaggattgctatcgcgcgtgccttggtgaggaaggcagagatcatgctgcttgatgag
gctactagtgctcttgatgcggagtcagagaggtcggtgcaagaggcgttggaccaggct
tgttctggtagaacgtcgatcgttgtggctcataggttgtctacgataaggaatgctcac
acgatcgcggtgattgatgatgggaaagtagcggagcaagggtcgcattctcagctgctt
aagaactatcctgatggaatctacgcgaggatgattcagttgcagaggtttacgcatggt
caggtcattggtatgacgtcaggggcgagttctagggttaaggaaggtgatgcttaa
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integrated database retrieval system
