Brassica napus (rape): 106399178
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Entry
106399178 CDS
T04128
Name
(RefSeq) LOW QUALITY PROTEIN: CSC1-like protein At1g62320
KO
K21989
calcium permeable stress-gated cation channel
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
bna02000
]
106399178
Transporters [BR:
bna02000
]
Other transporters
Pores ion channels [TC:
1
]
106399178
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
RSN1_7TM
PHM7_cyt
RSN1_TM
Motif
Other DBs
NCBI-GeneID:
106399178
NCBI-ProteinID:
XP_048626021
LinkDB
All DBs
Position
C9:14349378..14354295
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AA seq
779 aa
AA seq
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MATLSDIGVAAAINILSALIFLLLFAILRIQPINDRVYFPKWYLKGLRSSPVTSGAFVTK
VANFDFGSYIRFLNWIPAALKMPEAELIDHAGLDSAVYLRIYLIGLKIFVPIALLSWSIL
VPVNWTSDGLQLAQLRNVTSSDIDKLSISNVIYGSDRFWAHLVMEYAFTFWTCYVLMNEY
EKIASMRLAFLQSEKRRADQFTVLVRDVPPDSHESISENVEHFFMVNHPDHYLTNQVVYN
ANELAGLVEEKKKMQNWFDYYQLKYTRNKEHRPRVKLGFLGLWGKKVDAMDHYTAEIEKL
SEQIMAERKRVKKDENGVIPAAFVSFKTRWGAAVCAQTQQTKNPTEWLTEWAPEAREVYW
PNLATPYVSLTVRRFVMHVAFFFLTFFFIIPIAFVQSLASIEGIQKSAPFLNTIIEKKFI
KSVIQGFLPGIVLKLFLIFLPTILMIMSKFEGFVSISSLERRAAFRYYLFNLVNXFLGSI
ITGSAFEQLDSFLKQSADQIPRTVGVAIPIKATFFITYIMVDGWAGVAGEILRLKPFVIF
HLKNFFLVKTEKDREEAMDPGQIDFYATEPRIQLYFLLGLVYAPVTPVLLPFIIFFFGFA
YLIFRHQIINVYNQEYESAAAYWPDVHGRIISALIISQILLIGLMSTKGKAQSTPFLVIL
PILTIGFHRFCKGRYESAFVVNPLQESMIKDTLERAREPNLNLKGFLQNAYIHPVFKDEE
CEDDQYEELNEDSDDENCVVVPTKRQSRRTTASSSNPNGGSSQPLSCNQPDTGKGKPEP
NT seq
2340 nt
NT seq
+upstream
nt +downstream
nt
atggcgactttatcagatattggagtagcggctgcaataaacattctaagtgctttgata
ttccttttgctatttgcaatcttgaggatccaaccaatcaacgatagggtttatttccct
aaatggtacttaaaaggtcttaggagcagcccggttacttcgggtgcttttgtgaccaaa
gttgcgaattttgatttcggatcttacatacggttcttaaactggatccccgcggcgctc
aagatgccagaagctgaacttattgatcatgctggtttggattctgccgtctacttgagg
atttacttgattggacttaagatctttgttccgatcgcattactttcatggtcaattctg
gtacctgtcaattggactagtgatggactgcagctagcacaactacgtaatgtaacatcg
agcgatatcgataagctttcgatttcaaatgtcatatatggatcagacaggttttgggcg
catcttgtgatggaatacgcattcacattctggacttgttatgttcttatgaatgaatat
gagaaaatagcttcaatgcggttagcatttctccaatccgaaaagcgacgtgctgatcaa
ttcaccgttctggttagggacgtaccaccggactcacacgagtcaattagcgaaaatgtg
gagcatttctttatggttaaccacccggatcattatcttacaaatcaggtggtttacaat
gcaaatgaattggctggcttagtagaagagaagaagaaaatgcagaactggtttgattac
taccaactgaagtatacaagaaacaaggaacacaggccaagagtaaagttggggtttctt
ggtctatggggaaagaaagtagatgcaatggatcattatacagctgagatcgagaagcta
agcgagcagataatggcagaaaggaagagagtaaagaaagacgaaaatggtgtaatccca
gcagcttttgtctcttttaaaacacgttggggcgctgcggtttgcgcacagacccaacag
acaaagaatccaaccgagtggttaaccgaatgggctcccgaggcaagagaagtgtattgg
ccaaaccttgccacgccttacgtgtctctcacggtgaggagatttgtaatgcacgttgcc
ttcttcttcctcacttttttcttcatcatcccaatcgcatttgtgcaatcccttgcgagc
atcgaaggtatccaaaaatccgctccgttcctcaataccatcatagaaaagaagtttatt
aaatcggtgatccaagggtttcttcccggtattgtcttgaagctctttctgatatttctg
ccgacgatcttgatgatcatgtcgaaattcgaaggttttgtttcaatatcatcattagag
agaagagccgctttcagatattatctattcaaccttgtgaatngtttcctcggtagcata
atcaccggatctgcatttgaacagctagattctttccttaaacaatccgctgatcagatt
ccacggacggttggggtagccattccaataaaggcaacgttctttataacgtatataatg
gttgatggttgggccggtgtggctggagagattcttaggttgaaaccgtttgtcattttc
catttgaagaacttcttcttggtgaaaactgaaaaagatagagaagaagcaatggatccg
ggacagattgatttttatgcaacggagcctcggattcaactctacttcctccttggtctt
gtctatgctccagtcacacccgttctacttccgttcatcatcttcttctttggtttcgct
tacctcatcttccgtcatcagatcataaatgtgtataatcaagagtatgagagcgcggct
gcgtactggccggacgtccatggacgtataatatcagcattgatcatctctcaaatcctt
ttgattggattaatgagcacaaaaggaaaagctcagtccacgccttttcttgtcattcta
cccattctcaccatcggttttcaccggttctgcaaaggccggtatgaatctgcattcgtc
gttaaccctttgcaggaatctatgattaaggatacgttggaacgcgcaagagagcccaac
ttgaatcttaaagggtttcttcaaaacgcatatattcatccagtttttaaagacgaagaa
tgcgaagatgaccagtatgaggaacttaacgaggattcggatgacgaaaattgtgtagtt
gtacctaccaagcgtcagtctcgaagaaccaccgctagcagcagcaatccgaatggtggt
tcgtcacaacccctgtcttgtaatcaacctgacactggtaaaggaaaaccggagccttga
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