Brassica napus (rape): 106415574
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Entry
106415574 CDS
T04128
Name
(RefSeq) serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform
KO
K03456
serine/threonine-protein phosphatase 2A regulatory subunit A
Organism
bna
Brassica napus (rape)
Pathway
bna03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
106415574
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
bna01009
]
106415574
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bna03019
]
106415574
03036 Chromosome and associated proteins [BR:
bna03036
]
106415574
Protein phosphatases and associated proteins [BR:
bna01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
106415574
Messenger RNA biogenesis [BR:
bna03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
106415574
Chromosome and associated proteins [BR:
bna03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
106415574
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT
HEAT_2
Htt_N-HEAT_1
Vac14_Fab1_bd
PDS5
HEAT_EZ
SCD
Adaptin_N
CLASP_N
Cnd1
CEP104-like_TOG
Cobl
Motif
Other DBs
NCBI-GeneID:
106415574
NCBI-ProteinID:
XP_013711782
LinkDB
All DBs
Position
A7:11512042..11515629
Genome browser
AA seq
586 aa
AA seq
DB search
MAMVDEPLYPIAVLIDELKNDDIQLRLNSIRRLSTIARALGEERTRKELIPFLSENSDDD
DEVLLAMAGELGVFIPFVGGVEHAHVLLPPLESLCTVEETCVREKAVDSLCKIGSEMRES
DLVDSFVPLVKRLAAGEWFAARVSACGLFHVAYQGCTDVLKTELRSIYNQLCQDDMPMVR
RAAATNLGKFATTLESSYLNAEIMTMFDDLTKDEQDSVRLLAVEGCAALGKLLEPQDCVA
RVLPVIVNFSQDKSWRVRYMVANQLYELCEAVGPDCTKTDLVPAYVRLLQDNEAEVRIAA
AGKVTKFCQLLNPELSIQHILPCVKDLSSDSSQHVRSALASVIMGMAPILGKDSTIEHLL
PIFLSLLKDEFPDVRLNIISKLDQVNQVIGIDLLSQSLLPAIVELAEDRHWRVRLAIIEY
VPLLASQLGIGFFDDKLGALCMQWLQDKVYSIREAGANNLKRLAEEFGSEWAMQHLVPQV
LEMVNNPHYLHRMMALRAISLMAPVMGSEITCSKFLPVVVEASKDRVPNIKFNVAKLLQS
LIPIVDQSVVDKTIRQCLVDLSEDPDVDVRYFANQALQSINGAAVA
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atggccatggtggatgaacctttatatcccatcgctgtgctcattgacgagcttaagaac
gacgatatacagcttcgtttgaactccatccgtcgcctatctacaatcgctcgtgccctt
ggagaggagcgcacgaggaaagagttaatccccttcctgagtgagaacagtgatgatgac
gacgaggttctccttgcaatggctggggagctcggagttttcattccttttgttggaggg
gttgagcatgcgcatgtgcttctccctcctcttgaatctctctgcaccgttgaagagacc
tgtgtgagagagaaagctgtggactcgctttgcaagatcggatctgagatgagggagagt
gatcttgtggactcctttgtccctcttgtgaagagacttgcagctggtgaatggtttgca
gctagagtttccgcatgtggtttgtttcatgttgcgtaccaaggctgtactgatgtgttg
aagacagagttgcggtctatttataaccagttgtgccaagatgatatgcctatggtgcgg
agagctgctgcaactaacctggggaaatttgctactactttggagtccagctatttgaac
gctgagatcatgactatgttcgatgatcttactaaagatgaacaagattctgtcagacta
ttggctgtggaaggctgtgcagctcttggaaagttactggaacctcaggattgtgttgca
cgcgttttacctgttattgttaatttctctcaggataaatcttggagggtgcgctacatg
gttgctaatcagctatatgaactttgtgaggcagttggtcctgattgcaccaagacggat
ttggttccagcgtatgtaagactgctacaggacaatgaggctgaagtgcgaatagcagca
gcggggaaagtgactaagttctgtcagcttttgaatccagagctttctattcagcacatc
cttccttgcgtgaaggatttatcatccgattcttctcaacatgtccgctctgctctagcg
tcagtaataatgggaatggctcctatccttggaaaggactcaaccattgagcatctgcta
ccaatttttctctcccttttgaaagatgaatttcctgatgtacgcctcaacatcataagc
aagctagaccaagtcaaccaggttattgggattgatctgctgtcacaatccttgttaccg
gcgattgtagagcttgccgaggatcggcactggagagttcgtcttgctattattgagtac
gttcctctgttggccagccagctaggtatagggtttttcgatgacaagctcggagccctt
tgcatgcaatggttacaagacaaggtctactctatccgtgaagctggagcaaacaaccta
aagcgtcttgcagaggagtttggttctgaatgggcaatgcagcacctagttccccaggta
ttggagatggtcaacaatccgcactacctacacaggatgatggctctacgtgcaatatca
ctcatggctcctgtaatgggatcagaaatcacatgttctaagtttcttcccgtcgtggtt
gaggcatcaaaagacagagttccaaacatcaagttcaatgttgcaaaacttctgcaatcc
ctcatccccatagtcgaccaatcagtggtggacaaaacaatacgtcagtgtttggtggac
ctgagcgaggaccctgatgttgatgttcgttattttgcaaaccaagcgcttcagtccatt
aatggtgccgcagtggcgtaa
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