Brassica napus (rape): 106415586
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Entry
106415586 CDS
T04128
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 20
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
bna
Brassica napus (rape)
Pathway
bna03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
106415586
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bna03041
]
106415586
03009 Ribosome biogenesis [BR:
bna03009
]
106415586
Enzymes [BR:
bna01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
106415586
Spliceosome [BR:
bna03041
]
Complex A
U1 snRNP components
U1 related factors
106415586
Complex B
106415586
Ribosome biogenesis [BR:
bna03009
]
Eukaryotic type
Pre-60S particles
Helicases
106415586
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
106415586
NCBI-ProteinID:
XP_013711792
UniProt:
A0A078FB31
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All DBs
Position
C3:73228367..73231775
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AA seq
499 aa
AA seq
DB search
MSRYDSRTGDSTSYRDRRSDSGFGGASAYGSSASKRESSSVGDESPKKPDLDGLTPFEKN
FYVESPSVAAMTEAEVEEYRKKREITVEGRDIPKPVKSFRDVGFPDYVLEEVKKAGFTEP
TPIQSQGWPMALKGRDLIGIAETGSGKTLSYLLPAIVHVNAQPILAPGDGPIVLVLAPTR
ELAVQIQQEASKFGSSSKIKSTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMMESNNT
NLRRVTYLVLDEADRMLDMGFDPQIRKIVSHIRPDRQTLYWSATWPKEVEQLSKKFLYNP
YKVIIGSSDLKANRAIRQIVDVISESQKYNKLVKLLEDIMDGSRILVFLDTKKGCDQITR
QLRMDGWPALSIHGDKSQAERDWVLSEFRSGKSPIMTATDVAARGLDVKDVKYVINYDFP
GSLEDYVHRIGRTGRAGAKGTAYSFFTAANARFAKELISILEEAGQKVSHELASMGRSTA
PPPPGLGGFRDRGSRRAWS
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atgagtcgctacgatagccggaccggcgactccacctcctaccgtgaccgtcgaagtgac
tcagggtttggtggagcttcagcatacggaagctcagctagtaaaagggagagtagtagt
gttggcgatgagtctccaaagaagcctgatttggatggtttgactcctttcgagaagaat
ttttatgttgagtctccctctgtggcggctatgacggaggcggaagtggaggagtatcga
aagaagagggagattactgttgaaggtcgtgatattcctaaacctgtcaaaagctttcgt
gatgttggctttcctgattatgttttggaagaggttaagaaggctggttttactgaacct
acacctatacaatcacaagggtggccaatggcgttgaagggacgtgatctcattggcatt
gctgaaactggctctggaaagactctttcttacttgctacctgccatagtccatgtgaat
gctcaaccaattttagctcctggagacggcccaatagtcttggttcttgctcctacacgt
gaactggctgtgcagatacagcaagaagcgtctaagtttggttcatcgtcaaagattaag
agcacttgcatttacggtggtgttccaaaagggcctcaagtgcgtgatctccagaaaggt
gtggagattgttatagctactcctgggaggttaatagacatgatggaatcgaacaacaca
aacttgcggagggttacgtatcttgttttggatgaggctgatcgaatgctggatatgggg
tttgaccctcagatccggaaaattgtctcacatattcggccagaccgtcaaactttgtac
tggagtgctacttggccaaaggaggtggaacaactctctaagaagtttctttataaccca
tacaaagtgataataggttcttcagatttaaaagctaaccgtgctatccgtcaaattgtt
gatgtcatctccgaaagccaaaagtataacaagttggtgaagttgcttgaagacataatg
gatggaagcaggattcttgtcttccttgacaccaaaaagggctgtgaccaaatcactcga
cagcttcgcatggatggttggcctgctttgtcaatacatggtgataaaagtcaagccgag
agagattgggttctctcggagtttagatcaggcaaaagccctataatgactgctacagat
gttgcagctcgtggattagacgttaaagatgtgaagtatgtgataaactatgacttccct
ggatcactggaggattatgttcacaggattggacgaactggtagagctggggccaaagga
acagcttacagtttcttcacagctgcaaatgcgagattcgccaaagagcttatcagcata
ctagaagaagctggacagaaagtgagccacgaattagcttcaatgggtcgcagcactgct
cctcctcctccagggcttggaggatttagagaccgtggaagcagaagagcttggagctga
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