Brassica napus (rape): 106418201
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Entry
106418201 CDS
T04128
Name
(RefSeq) biotin carboxylase, chloroplastic
KO
K01961
acetyl-CoA carboxylase, biotin carboxylase subunit [EC:
6.4.1.2
6.3.4.14
]
Organism
bna
Brassica napus (rape)
Pathway
bna00061
Fatty acid biosynthesis
bna00620
Pyruvate metabolism
bna00640
Propanoate metabolism
bna01100
Metabolic pathways
bna01110
Biosynthesis of secondary metabolites
bna01200
Carbon metabolism
bna01212
Fatty acid metabolism
Module
bna_M00082
Fatty acid biosynthesis, initiation
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00620 Pyruvate metabolism
106418201
00640 Propanoate metabolism
106418201
09103 Lipid metabolism
00061 Fatty acid biosynthesis
106418201
Enzymes [BR:
bna01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.4 Other carbon-nitrogen ligases
6.3.4.14 biotin carboxylase
106418201
6.4 Forming carbon-carbon bonds
6.4.1 Ligases that form carbon-carbon bonds (only sub-subclass identified to date)
6.4.1.2 acetyl-CoA carboxylase
106418201
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Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
Biotin_carb_N
Biotin_carb_C
ATP-grasp
Dala_Dala_lig_C
ATP-grasp_5
ATP-grasp_3
RimK
Motif
Other DBs
NCBI-GeneID:
106418201
NCBI-ProteinID:
XP_013714313
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Position
C8:complement(47821622..47825823)
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AA seq
536 aa
AA seq
DB search
MDASMITNPKSIVSLPSLFMGRSGGSIRSSQCNVTMGQAVSFPSQKTKTLKVSRNVKRRS
GGGGAFAATCSSGDKILVANRGEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLADEAV
CIGEAPSNQSYLLIPNVLSAAISRGCTMLHPGYGFLAENALFVEMCREHRINFIGPNPDS
IRVMGDKSTARETMKNAGVPTVPGSDGLLQSTEEGVRLANEIGYPVMIKATAGGGGRGMR
LANEPSEFVKLLQQAKSEAAAAFGNDGVYLEKYVQNPRHIEFQILADKFGNVVHFGERDC
SIQRRNQKLLEEAPSPALTPELRKAMGDAAVAAAASIGYIGVGTVEFLLDERGSFYFMEM
NTRIQVEHPVTEMIYSVDLIEEQIRVAMGEKLRYTQDEIVLRGHSIECRINAEDPFKGFR
PGPGRITSYLPSGGPFVRMDSHVYPDYVVPPSYDSLLGKLIVWAPTRERAIERMKRALND
TIITGVPTTIEYHKLILEVEDFKNGKVDTAFIPKHEEELAEPHEIVPVKDLTNVAA
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atggacgcttcaatgattactaatcctaaatccattgtctcccttccctctttgttcatg
gggaggtcgggaggtagcattagaagttcccaatgtaatgtcacgatgggacaagcggtt
agcttcccgagccaaaaaaccaaaactttgaaagttagccggaacgtgaagagaaggagt
ggtggtggtggtgcgtttgctgctacttgcagcagtggggataagattcttgtggctaac
agaggtgaaatcgctgtccgtgttatccgaactgctcacgaaatggggatcccttgtgtt
gctgtttactccactatagacaaagatgcactccatgtgaagttggctgatgaagctgtt
tgtattggtgaagctccaagcaaccagtcgtatttgttgataccgaatgttctgtcagct
gcgattagcagaggatgtacgatgctccatcctggatatggattccttgcggagaacgct
ctttttgtagagatgtgtagagaacacaggatcaacttcattggaccaaatcctgatagt
atccgtgtcatgggtgacaaatcaactgccagggagacaatgaaaaatgcaggtgttcct
actgtaccagggagtgatggattattgcagagcacagaagaaggagtcaggcttgccaat
gagattggataccctgtaatgatcaaggcaacagcaggtggtggtggacgtggaatgcgt
cttgctaatgaaccttcagagtttgtgaaactgttgcagcaagcaaagagtgaggccgct
gctgcttttggaaatgatggagtttatctggagaagtacgttcaaaatccccgtcatatt
gagttccagattcttgcagataaatttggtaatgttgttcactttggcgagcgtgactgc
agcatccagagacgtaaccaaaagttgctggaagaagcaccttctcccgcactgacccct
gagctgcgtaaagccatgggtgatgcagcagtggcagcagcagcgtccattggttacatt
ggtgttggtaccgtggagtttcttttggatgagagaggttccttctatttcatggaaatg
aacactagaatccaggtggagcaccctgtgacggagatgatttactccgttgatttgatt
gaagaacagattcgtgttgcaatgggagagaaactgcgttatacacaggatgagattgtg
cttaggggacattctattgaatgtcgtatcaatgcagaagacccatttaaaggattcaga
cctggacctggaaggataacatcgtatctgccatctggaggtccttttgttaggatggat
agccatgtatatccagactatgtcgttcctccaagctatgattctcttcttggaaagctt
attgtatgggctccaacgagggaaagggcgatcgagcggatgaagcgtgcacttaatgac
actattattacaggggttcccaccaccattgagtaccacaagcttatccttgaagttgag
gatttcaaaaacggaaaagttgatacagctttcatccccaagcatgaagaggaattagca
gagcctcatgaaattgtaccagtgaaagatttgacaaatgtagctgcttag
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