Brassica napus (rape): 106418906
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Entry
106418906 CDS
T04128
Name
(RefSeq) probable cyclic nucleotide-gated ion channel 20, chloroplastic
KO
K05391
cyclic nucleotide gated channel, plant
Organism
bna
Brassica napus (rape)
Pathway
bna04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
106418906
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
bna04040
]
106418906
Ion channels [BR:
bna04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
106418906
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GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
Ion_trans_2
Motif
Other DBs
NCBI-GeneID:
106418906
NCBI-ProteinID:
XP_048609103
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Position
C3:28926722..28930124
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AA seq
674 aa
AA seq
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MASPMENDDVPMLPASDTSSSSRTMPFTSRSRSTSLANNSSTIDVFNSSTVVLGYTNHLG
TQRRPPLVQMSDPLSSTRSPEPRFALPSPSTGASSDSVGASSSQPNERNHAYSRTPRVFA
TSDFTLHNALDDDAKGWAKYFSGIIYPESNFVQIWTTFFALSCLCSIFVDPLFFYPIEIY
KEERCIKIDWWTTNVFVIVRSITDGLYALNIVLQFRLAYVDLESTVVGAGQLVDDPKKIA
SHYLRGKFLTDFFIVLPIPQILLLWIIPQLLGTSGANNTKNYLRAAILVQYIPKLRRLFP
LLAGQTPRGFRFDSALAKFFINLLTFMLAGHVIGSCWYLLGLQRVNQCLRDACGNSSFEC
KQLIDCGRENRTEVLHAWKINVSANACFQEDGFDYGIYLKAVNLTSNCTRWYRRYSYSLF
WGFQQISTLAGNQVPSYFFGEVLFTMCIIGLGLFLFALLIGNMQNFLQSLGRRDTEMTVR
RRDVEQWMSHRRFPKDIRKRVREVERLNWNATRGVNEELLFENMPDDLQRDIRRHLFAFL
KKVRIFSEIDESILDAMRARLKQRTYLKNNKVLHRGGVVKKMVFILRGKMESIGEDGYRI
LLSEGDVCGEELLTWCQERSSVNPDGTMIRMPSKGLLSSRDVWCVTNVEAFSLSVADLED
ITSLFPNLEIPKEP
NT seq
2025 nt
NT seq
+upstream
nt +downstream
nt
atggcttctcccatggagaacgatgatgttcccatgcttccagcttcagacacatcatca
tcatctcgtactatgcctttcacttccaggtcacgtagcacttcccttgcaaacaattct
tccaccattgacgtattcaacagctcgacagttgttttaggctacacaaatcatcttgga
acccagagacggcctccgttagtgcaaatgagtgaccctctttcctctactcgcagtcct
gagcctcgctttgctcttccttctccttctactggtgcttcttctgattccgttggtgcc
tcctcctctcagcctaatgagaggaatcatgcctacagccgcactcccagagtttttgcc
acttctgatttcacgctccataacgctcttgatgatgatgctaaaggctgggctaaatac
ttttctggaatcatatatcctgagtctaatttcgttcagatctggactacattctttgcc
ttatcatgcttgtgttctattttcgtagatcccctctttttctaccccatagaaatatat
aaggaggagagatgcattaagatcgactggtggacgactaatgtatttgtaattgtgaga
agtataacggatggcttatacgctttgaacatcgtgcttcagttccgattggcatatgta
gatcttgagtctacggttgttggtgctggccagttggttgatgatccaaaaaaaattgct
agccattacttacgaggaaaatttttgacagactttttcatagtgttgccaattccacag
atattgctattatggataataccacaactgttaggcacatctggggcaaacaatacaaag
aactatttacgtgctgcaattcttgtccaatacattccaaaattacgtaggctttttcct
cttctagccggacaaacaccaagagggttcagatttgattcggcattggccaagtttttt
ataaatcttctcaccttcatgcttgctggtcatgttattggctcttgctggtatcttttg
ggtctgcagagagttaatcagtgccttcgagatgcttgcggaaattctagttttgaatgt
aaacaactaatagattgtggtcgtgaaaacagaacggaagttttacatgcatggaaaatt
aacgttagtgccaatgcttgttttcaagaggatggttttgattatggaatctatttgaag
gcagtcaatctcactagtaattgtactcgttggtacagaagatacagttactctcttttc
tggggatttcagcaaatcagcacgcttgctggaaaccaagtcccaagttacttttttggg
gaggtcttatttactatgtgtatcatcggactggggcttttccttttcgcgcttcttatc
ggtaatatgcaaaacttccttcagtctctcggccgaagggatacagaaatgactgtaaga
cggcgtgatgtggagcaatggatgagccatagacggtttccaaaagacataagaaagaga
gtgcgagaggttgagaggctcaactggaatgctactagaggagttaacgaagaattgctc
tttgagaatatgcctgatgaccttcagagagatataagacgtcatctcttcgcatttctc
aagaaggtgaggatattttcggagattgatgaatctatcttagatgccatgcgtgcgagg
ctgaaacagaggacttacttaaagaataacaaggtcttgcaccgcggaggtgtagttaag
aaaatggtattcatattgagaggtaagatggagagcattggagaagacggttatcgaatt
cttttatcagagggagacgtttgtggtgaagaacttctcacttggtgccaagaacgctct
tctgtaaacccagatgggactatgataaggatgccatcaaagggactgcttagcagcaga
gatgtttggtgtgtgacaaacgtggaggcgttttcactcagtgtagcagatcttgaagac
atcacgagcttgttccccaatctcgagattcctaaggagccataa
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