Brassica napus (rape): 106424469
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Entry
106424469 CDS
T04128
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 14
KO
K11836
ubiquitin carboxyl-terminal hydrolase 5/13 [EC:
3.4.19.12
]
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
bna01002
]
106424469
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bna04121
]
106424469
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
bna04147
]
106424469
Enzymes [BR:
bna01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
106424469
Peptidases and inhibitors [BR:
bna01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
106424469
Ubiquitin system [BR:
bna04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
106424469
Exosome [BR:
bna04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
106424469
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
zf-UBP_var
UBA
zf-UBP
UCH_1
UBA_4
Motif
Other DBs
NCBI-GeneID:
106424469
NCBI-ProteinID:
XP_013720685
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All DBs
Position
A3:complement(19163290..19168961)
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AA seq
797 aa
AA seq
DB search
MELLRSNLSRVQIPEPTHRIYKHECCLSFDTPRSEGGLFVDMNSFLAFGKDYVSWNYEKT
RNPVYLHIKESPKSVPEDRPLKKPTLLAIGVDGGFDNNEPEYEESYSIVILPDFVSLPFP
SVELPEKVRIAVDTVMSAVGAEKREQVAAWTAEEKKVSEHALTLQQIKSGVVIPPSGWKC
SKCDKTENLWLNLTDGMILCGRKNWDGTGGNNHAVEHYKETNYPLAVKLGTITADLGAAD
VYSYPEDDSVLDPHLAQHLAHFGIDFSTMQKTEMTTAERELDQNTNFDWNRIQESGKELV
PVFGPGYTGLVNLGNSCYLAATMQILFSTHSFISRYFSHQSLKLAFEMAPADPTLDINMQ
LTKLGHGLLSGKYSIPVAEKDVATGDVRQEGIPPRMFKSVVAAGHAEFSSMRQQDALDFF
LHLLDKVERGNNMRPDLDPSRSFKFGVEEKILCSSGKVSYNKRDDCILSLNIPLQEATNK
DELEAFNNQKADKGLEEDNMSTDEIVRPRVPLEACLATFSSPEQILDYYSTALKGKTTAI
KTTSLTSFPDYLVLHMRKFVMEAGWVPKKLDVYIDVPDVIDISHMRSKGLQPGEELLPDD
VPEEAMESAQPVANEEIVAQLVSMGFSQLHCQKAAINTSNTGVEEAMTWLLSHMDDPDID
APISNQTSDVDQSSVDTLISFGFADEVARKALKASGGDIEKATDWIFNNPNASISDMDVS
SSNSAQTPAQSELPDGGGRYKLFGIVSHIGTSTHCGHYVAHILKEGRWVIFNDSKVGVST
NPPKDMGYLYFFQRLDN
NT seq
2394 nt
NT seq
+upstream
nt +downstream
nt
atggagctcctccgatcaaacttgtctagggttcagatccccgagcccacccaccgcatc
tacaagcacgagtgctgcctctccttcgacactccgagatccgaaggaggattgttcgtg
gatatgaacagctttctcgcttttgggaaagattacgtttcctggaactacgagaagacg
cgaaaccctgtgtatctgcacatcaaggagtctcccaagtctgtccctgaggatcggcct
ctgaagaagccgactctcctcgctataggagtggatggtggatttgacaacaatgagcct
gagtatgaagagtcttatagcatagtcatacttccggattttgtttcacttccattccct
tctgttgagctaccagagaaggtgaggattgcggttgatactgtaatgagtgcagttggt
gctgagaagagagagcaagttgcggcttggacagctgaggaaaagaaagttagtgagcat
gcgttgacgctgcagcagatcaagagcggcgttgttattcctccctctggttggaaatgt
tccaagtgtgataagacggagaatctgtggcttaatcttaccgacgggatgattctctgt
ggaaggaagaactgggatgggactggtggaaataaccatgcagttgagcattacaaggag
acaaactaccctcttgctgtcaagcttggaactatcacagctgacttgggagcagcagat
gtttattcctatccggaagatgacagtgtgttggacccgcacctggctcagcatctggcc
cattttggaatcgacttctccacgatgcagaagacagaaatgacaactgccgaaagagaa
cttgatcaaaatacgaattttgattggaatcgtatacaagagagtggaaaagaattggta
ccagtttttggaccgggatataccggacttgtcaatcttgggaacagttgctacttggcc
gctacgatgcagattcttttctcgacccattcgtttatttcaagatacttttcacatcag
agcttaaagttggcatttgagatggctccggctgatccaactttggacatcaatatgcaa
ttaacaaagcttggacatgggttattatctgggaagtactctattcctgtggcagagaag
gatgttgcaactggagatgttagacaagaaggaatacctcctcgcatgttcaaatcggtg
gttgctgcaggacatgcagaattctcttctatgagacaacaggatgctcttgactttttc
ctccatttgctagacaaggttgagcgtggcaacaacatgagaccagatttagacccttcg
aggagcttcaaatttggagtagaagaaaagatcctttgttcatctggaaaggtttcatat
aataagagggatgactgtattctttctttgaacattccattgcaggaggcaactaataaa
gatgaactagaagcctttaacaaccagaaagcagacaaaggactggaagaagataatatg
tcaactgatgaaattgtacgcccacgagttcctttagaagcttgtctagcaacgttttcg
tcacctgagcagattcttgattactatagcactgctctgaaagggaagacaacagctatc
aagacaactagtttgacatctttcccagattatttggtgttgcacatgcggaagtttgtt
atggaggcaggctgggtgccaaagaaacttgatgtgtacattgatgttccggatgtaatt
gatatcagccacatgcgcagcaaagggcttcagcctggcgaggaactattgccagacgat
gttccagaagaagcgatggaatcagcacagcctgtggcaaatgaggagatagttgcacaa
cttgtctcaatgggattcagccagcttcactgccagaaagccgccataaatacttctaat
actggggtggaagaggcgatgacctggttgctttctcacatggatgatccagatatcgac
gcaccaatctccaatcagacatctgacgttgatcaatcaagcgttgataccttaatctct
tttggttttgctgatgaggttgctcgaaaggcactcaaagcctcgggaggagatattgag
aaagcaacagattggatattcaacaaccctaatgcatctatctcggacatggacgtgtcc
tcaagcaattcagcacaaactccagctcaaagtgaattaccagacggaggagggagatac
aagctgtttgggatagtaagccacattggaacatcaactcactgtggtcactatgtggca
cacatattgaaagaaggtcgttgggtgatcttcaatgacagcaaagtaggtgtctcgaca
aatcctcctaaagacatgggttacctttacttctttcagcgtctggacaattga
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integrated database retrieval system
