Brassica napus (rape): 106430357
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Entry
106430357 CDS
T04128
Name
(RefSeq) DNA mismatch repair protein MSH4 isoform X1
KO
K08740
DNA mismatch repair protein MSH4
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
bna03036
]
106430357
Chromosome and associated proteins [BR:
bna03036
]
Eukaryotic type
Meiosis-specific proteins
Others
106430357
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
Motif
Other DBs
NCBI-GeneID:
106430357
NCBI-ProteinID:
XP_048622120
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Position
C8:20950219..20955982
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AA seq
795 aa
AA seq
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MEDDGGERSSFVAGLIENRAKEVGMAAFDLRSASLHLSQYIETSSSYQNTKTLLRFYDPC
VIIVPPNKLAADGMVGVSELVDRCYSTVRKVVFARGCFDDTKGAVLIQNLAAEEPLALGL
DTYYKQHYLSLAAAAATIKWIEAEKGVIVTNHSLTVTFNGSFSHMNIDATSVENLEIIDP
FHNSLLGTNNKKRSLFQMFKTTKTVGGTRLLRANLLQPLKDIKTINTRLDCLDEMMSNEE
LFYGLSQVLRKFPKETGKQNRVLCHFCFKPKKVTEAVLGFDNTRRSQNMISSIILLKTAL
DALPLLAMALKDAKCFLLANIYKTVCENDRYASIRKRVGEVIDDDVLHARVPFVARSQQC
FALKAGIDGFLDMARRTFCDTSEVIHNLASKYREEFNLPNLKLPFNNRQGFFFRISQKEV
QEKLPSKFTQVVKHGKNIHCSSLELASLNVRNKSAAGECFVRTEICLEALMDAIREDVSA
LTLLAEVLCLLDMIVNSFAHSISTKPVDRYSRPELTDSGPLAIDAGRHPILESIHNDFVP
NSIFMSEASNMLVVMGPNMSGKSTYLQQVCLVVILAQIGCYVPARFATMRVVDRIFTRMG
TMDNLESNSSTFMTEMRETAFIMQNVSNRSLIVMDELGRATSSSDGLAMAWSCCEHLLSL
KAYTVFATHMDSLAELATIYPNVKVLHFHVDIRDNRLDFKFQLRDGTLHVPHYGLLLAEV
AGLPNTVIETARTITSRITDKEMKRIELNCEKHHEMHQIYRVAQKLICLRYSKQNEDSIR
QALQNLKDSFIEGRL
NT seq
2388 nt
NT seq
+upstream
nt +downstream
nt
atggaagacgacggtggagagagatcgagcttcgtcgctggactaatcgagaacagagcc
aaagaggttggaatggctgcgtttgatttaagatccgcttcactgcatctatctcagtat
atagagacgagcagctcgtatcaaaacacgaagacgctgctgcgtttctatgatccttgt
gtgattattgttcctcccaacaaacttgccgccgatggcatggttggggtttcagaattg
gtggatagatgttacagcaccgtcaggaaggttgtgtttgctcgtggctgtttcgatgac
accaagggtgccgtgctaatacaaaacttggctgcagaggaacctttggctcttggttta
gacacttactataagcagcattatctatcactagctgctgctgctgctacaatcaaatgg
atagaggcggaaaagggtgtgattgtcaccaaccactcactcactgtaacctttaatgga
tcctttagtcacatgaatatcgatgcaactagtgttgagaatctggaaatcattgatccg
ttccataattctcttttgggcactaacaataagaagaggagtctgttccagatgttcaag
acaacaaaaacagttggcgggactaggcttcttcgtgccaatttgttgcagcccctgaaa
gatattaaaactatcaacactcgcctggactgcttggatgagatgatgagcaatgaagaa
ctattctatgggctttcacaggttttacgtaaatttccaaaagagactggtaagcaaaat
cgtgttctttgtcatttctgcttcaagccaaagaaagtcacagaagcagtcctaggtttt
gataataccagaaggagccaaaacatgatttcaagcattattttacttaagacagccttg
gatgctctgcctctactagctatggctctaaaggatgcaaagtgttttctccttgctaat
atttacaagactgtgtgtgaaaatgatagatatgcttccatcagaaaaagagtcggggaa
gtgattgatgatgatgttcttcatgcacgagttccttttgttgcccgctcacagcagtgt
tttgcattaaaagctggtattgatggatttttggatatggcaaggagaaccttctgtgat
actagtgaagtgatacataatctggccagcaagtatcgtgaggaattcaacttgccaaat
ctaaaactcccattcaacaacagacagggcttcttttttagaatttcgcagaaggaagtt
caggaaaaacttccaagcaaatttactcaggttgtaaaacatgggaaaaacattcattgt
tcaagtctggaacttgcctctttgaatgtcaggaataagtctgccgctggagagtgtttc
gttcgaacggaaatatgcctggaagcacttatggatgctataagggaagatgtctctgcc
ctcaccctcctagcagaagttttatgtctcctagatatgattgttaattcatttgctcat
tcaatatccacaaagccagttgatcgatactccagacctgaactaacagatagtggccca
ctggcaattgacgctggaaggcatccaatcctagaaagcatacacaatgactttgttcct
aatagtatcttcatgtcagaagcaagcaacatgttggtagttatgggtccaaacatgagc
ggaaagagcacctatctccaacaggtgtgtctagtagtcattcttgctcagattggctgc
tatgtcccagctcgctttgccactatgcgtgtggttgaccgcatattcacaagaatgggg
acaatggataaccttgagtcaaattcaagcacgtttatgacagagatgagggagaccgct
ttcataatgcagaatgtctccaacaggagtttgatagtaatggacgaactcgggagggct
acttcttcctcggacgggttagcaatggcatggagctgctgcgagcatctcttatcgctc
aaagcgtacacagtatttgcaacccatatggacagcctggcggagttggcaaccatctac
ccgaatgtcaaggttcttcacttccatgtagacatcagagacaatcgcttagacttcaag
tttcaactacgagatggaacattacatgttcctcactacggccttctgttagccgaagtg
gctggtctgcctaatacagtaatcgaaacagctaggaccataacctcaaggatcacagac
aaggaaatgaaaagaatagagctaaactgtgagaagcaccatgaaatgcatcagatttac
agagtcgctcaaaagttgatatgcttgaggtactccaaacaaaacgaagactcaatccgt
caagctcttcagaatttaaaggacagcttcattgaaggaaggctctaa
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