KEGG   Brassica napus (rape): 106446140
Entry
106446140         CDS       T04128                                 
Name
(RefSeq) deoxynucleoside triphosphate triphosphohydrolase SAMHD1 homolog isoform X2
  KO
K22544  deoxynucleoside triphosphate triphosphohydrolase SAMHD1 [EC:3.1.5.-]
Organism
bna  Brassica napus (rape)
Pathway
bna03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:bna00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    106446140
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:bna03400]
    106446140
DNA repair and recombination proteins [BR:bna03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    Other HR factors
     106446140
SSDB
Motif
Pfam: HD HD_assoc_2 Rad21_Rec8_N
Other DBs
NCBI-GeneID: 106446140
NCBI-ProteinID: XP_013743283
LinkDB
Position
A4:complement(10086482..10090339)
AA seq 472 aa
MGAYCNDDLNMPVYSAGAPTNELRFSKHVYDNVHGNIYLDPLCLKFIDTEQFQRLRELKQ
LGVTNMVYPGAVHSRFEHSLGVYWLAGETAQKLKNFQGMELDIDKHDLQTVRLAGLLHDI
GHGPFSHMFEREFLPKVMSGCEWSHESMSVKMIDHIVDTHNIDIDAQMLKRVKDMILAST
EFSQLKSNAEKRFLYDIVANGRNGIDVDKFDYLVRDSRACGLGCNFQFQRLTETMRVMDN
EICYRAKEYRNVHKLFATRADLYRTVYTHPKVKAIELMIVDAMVKANDYLGISTNIDDPA
EYWKLDDTILKTIEIAPDQELAEAKDLILRVRRRQLYQFCNEYAVPKEKIEHFKAVTAQD
IVCSQKHTSLTLKEEDIAVTNVKIDLARGRENPLECIKFFKDYESEEKFVIPEERVSHLL
PTTFQDMIVRVYAKKPELVEAVSEAFENFQVRTYGIKAQVHETPEKKKRRVM
NT seq 1419 nt   +upstreamnt  +downstreamnt
atgggagcgtattgcaacgacgacctaaacatgccggtttactccgccggcgctccgacg
aacgagctccgattcagcaagcatgtctacgacaacgttcatggcaacatctacctcgat
cctctttgcttgaaattcattgacacggagcagtttcagaggcttcgtgaactaaagcag
cttggagtgacaaacatggtatatccgggagctgtgcattctaggtttgagcattctcta
ggtgtgtattggcttgcaggcgaaactgcacagaagctaaaaaatttccagggaatggag
ctcgatattgacaaacatgatcttcagactgtgagacttgcgggacttctccatgatatt
ggccatgggcctttcagccatatgtttgaacgtgagttcctgccaaaggtcatgagtggt
tgtgagtggtctcatgagtcgatgtctgtaaagatgattgaccatattgtggacacgcat
aacattgatattgatgctcaaatgttgaaaagagtgaaggatatgatcctagcaagtact
gaattttcacagctgaaaagcaacgcagagaaacgtttcttgtatgacattgttgctaat
ggtcgaaatgggattgatgtggacaagtttgactaccttgtccgtgattctcgagcttgt
ggactgggatgcaactttcagttccaaagactgacagagacgatgagagtcatggacaac
gaaatctgctatcgcgctaaggagtaccgtaatgttcacaagttatttgcaacacgtgct
gatctctatcgaactgtctacacacatccgaaagtaaaggcaatagagcttatgatagta
gatgctatggtcaaagccaacgattacttggggatttctactaacattgacgacccagct
gaatactggaagttggacgatacaatcctgaaaaccattgaaatagctccagatcaagaa
cttgcagaagctaaagacctgatactccgcgttcgcagaaggcagctgtaccaattctgt
aacgagtatgcggttccaaaggaaaaaatcgaacatttcaaagccgtcactgctcaagat
atcgtctgttctcagaagcatacaagcttaacactcaaagaggaggatatcgctgttacc
aatgtcaagattgatttagctcgtgggagagaaaaccctcttgagtgcatcaagttcttc
aaggattacgagagtgaagagaagtttgtgatacctgaggaaagagttagtcacttgtta
ccaacaacatttcaagacatgatagtgagagtatatgccaagaaaccagaactggtggaa
gcagtttctgaagcatttgagaacttccaagtgagaacgtatggaatcaaagctcaagtt
cacgaaacacctgagaaaaagaaacgccgtgtcatgtaa

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