Brassica napus (rape): 106452142
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Entry
106452142 CDS
T04128
Name
(RefSeq) protein REDUCED CHLOROPLAST COVERAGE 3 isoform X1
KO
K03255
protein TIF31
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
bna03012
]
106452142
Translation factors [BR:
bna03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
106452142
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_12
TPR_10
eIF3_p135
TPR_2
CLU_N
PAM2
TPR_8
CLU
TPR_9
TPR_MalT
TPR_1
Motif
Other DBs
NCBI-GeneID:
106452142
NCBI-ProteinID:
XP_013749627
UniProt:
A0A078HMB0
LinkDB
All DBs
Position
C5:complement(7703754..7712468)
Genome browser
AA seq
1593 aa
AA seq
DB search
MAPRSSKGKSNRGKGEKKKREEKVLVPSLVDITVTTPYETQVILKGVSTDKIIDVKRLLA
SHVDTCHLTNYSLSHQVKGHRLSDNIQVVTLKPSVLRMIPENYVEESQALTQVRRVLDIV
ACTTRFSSVSKASSNKLIAVGNGNPAAEGLDMVAIHPTPKLSQFYEFFSIPNVSPPILQL
KKVDGEEAGERRDGDYFELKVKICNGKVIHVVASVKGFFAVGKQLSHTHSIVDLLQNVSN
AFAKAYESLMKAFTDRNKFGNLPYGLRTNTWLVPPSESLSTFSPLPTEDENWGGNGGGQG
RNGEHDLRPWAAEFSVLATLPCKTEEERVIRDKKAFLLHNLFVDASVRRAVRAISDVIGT
NQRTSGTSDFPAGSILLEDRVGDLSIIVKRDVAGLDQNPKGAFQNEAFPLSSKELSERNL
LKGITADESVIVHDIWALSTVIVKHCGYTAVVNVKGETKKGMAGLRDIVIDDLPDGGANA
LNLNSLRVQLHRSHSVGKSGGNQPPQFDLDDLESFRCLVHELVKNNLTKLEEERESSERS
IRWELGSCWVQHLQKKETVTEDLCGKPAMNGETDLSVKGLGKQFKVLKMKNKKSENTSTV
KGKEENISLRELDGEADQHFEAELKELVSEEAFSRLKESGTGLHLKSKEELTKMVYGYYD
EIALPRLVADFGSLELSPVDGRTMTDFMHIRGLQMRSLGHVAKLAEDLPHIQSLCIHEMI
TRTFKHLLRAVIASINKMAELPGAIAASLNFMLGLHGLEGSDGISSEESCLRLQWLQKFL
STRFGWIQKDEFKHLNKVSILRGLCQKVGLELIPRDYDFDSPNPFKSSDVFGLIPVCKHV
LCVSSDGRTLLESSKLALDKGKLDDAVNHGTKALAKMIAVCGPYHKNTACAYSLLAVVLY
HTGDFNQATIYQQKALDINEKELGLDHPDTMKSYGDLSVFYYRLQHIELALKYVNRALFL
LHFTCGLSHPNTAATYINVAMMEEGVGNVHLALRYLHEALKCNKRLLGADHIQTAASYHA
IAVALSLMEAYSLSVHHEQTTLQILTKTLGSDDLRTQDAAAWLEYFESRAIEQQEAARNG
IPKPDASIASKGHLSVEDLMDYISSDPDNKGSVVHRKLRRLTVSPVSDSGASADDATHSV
ASQHGMATLNDVVETNVTESKNEVNDPNAVVDEVEIETGDTLVHRLNVDNQTVEESALGE
GWQEAYPKGRSGNGARKKFRQRQPYQRVSLNRNLNGRQDVHQHYIASPLQKTTPRPSLSK
PSSLRALKNGEIDVSKKTIKPQIKSPGYAAATSTTLASKSLSYKEVALAPPGTVLKPMLE
KLELNLERTETQIYRISSSSTGEESKSDAVMSDLPTEGTELPCEKEESEESVESVENLTS
EPEEDLVSCREQKASDISRRKLSAAAEPYNPGGFLVTDPHSLAAEPISGTGIHSPPYYGA
NYPNGNGMPKTMNPDAPEFVPRRSVMKSSLHEGGDASVSVDSSSGLEAEKNAAALKKEEL
ARQILLSFIVSSSQKEVVASKKKENKPKDDLADTSAKDSTVTEIVYRREEDSGVKENETD
GGEGFVIVAKKRRKKRLTNDAAGIYHQPSSVCA
NT seq
4782 nt
NT seq
+upstream
nt +downstream
nt
atggcaccgaggtcaagcaaagggaagtcaaacagagggaaaggagagaagaagaagaga
gaagagaaagtgttggtgccgagtctggttgatatcacagtcacgactccttacgaaaca
caagtgatactcaaaggagtctctactgacaagatcattgatgtgaaaaggcttctggca
tctcatgttgacacttgccacctcaccaactattccctctcgcatcaggtgaaagggcat
agattgagtgataacatccaagtggttaccctcaagccttctgtcctccgtatgattccg
gagaactacgtggaggaaagtcaagctttgactcaggtgcggagagtcctagacatcgta
gcgtgcaccaccaggttctcctccgtctccaaagcttcttccaacaaactcatcgccgtc
ggaaatggcaatccggcagcggagggactggacatggtcgctatccacccgacgcccaag
ctctctcaattttacgagtttttctccattcccaacgtctctcctccgattcttcagttg
aagaaagtggatggtgaagaagctggagagaggcgtgatggtgactattttgaacttaag
gtcaagatatgcaatgggaaggttatacatgtggttgcatcggttaaaggtttctttgcc
gttgggaagcagctctctcatacccattccattgttgatttgcttcagaatgtcagcaat
gcttttgccaaggcttatgagtcactgatgaaagctttcactgaccggaataagtttggc
aaccttccgtatgggttacgcacaaacacgtggcttgtacccccttctgagtctttatca
accttctcccctttaccaacagaggatgaaaactggggagggaacggtggaggccagggg
aggaatggtgaacatgatcttcgtccctgggcggctgagttttctgtgttagctacgctt
ccttgcaagactgaggaggagagggttattcgtgataagaaggcttttctgcttcataac
ctgtttgttgatgcctctgttcgaagagctgttagagccatttccgacgtgattggtact
aatcaacgcacaagtggaactagtgacttccctgcaggctccatccttcttgaagatcgg
gttggagatttgtctattattgtaaaacgtgatgttgccggccttgaccagaatcctaaa
ggtgcatttcaaaatgaagcatttcctttgtcatccaaggaacttagtgaaaggaatctg
ctaaaagggataacagctgatgagagtgtcattgttcacgatatttgggctttaagcaca
gttattgtaaagcactgtggatatacagcggtggtaaatgtcaagggcgaaactaagaag
ggaatggctggtttacgtgatattgtgatcgatgacttaccggatggaggagctaatgct
cttaaccttaacagcttaagggttcagcttcacaggtcccatagtgtcggaaaatctgga
gggaaccagcctccacagtttgatttggatgatttagagtcttttagatgtttggtacat
gaactagttaaaaataacctaacgaagttagaagaagaaagggaatcttccgaaaggtcc
atcagatgggagctcggttcttgctgggttcagcatctacaaaagaaagaaacagtaacg
gaagatctctgtgggaagcctgcaatgaatggtgagactgacctttcagtcaaaggtttg
gggaaacaatttaaagttctaaagatgaaaaataagaaatcagaaaatacaagtaccgtg
aagggaaaggaagaaaatatcagtctacgcgagttagatggggaggctgatcaacacttt
gaggctgaactgaaggaactggtttctgaagaagctttctctcgcctaaaagaaagtgga
actggtctccatttaaagtcaaaagaagagcttaccaagatggtatatggatactatgat
gaaattgctttgccaaggctggtagcagattttggatccctggagctttctccagttgat
ggccgcacaatgacagacttcatgcatattagaggactccaaatgcgttctctaggacat
gtggctaaacttgctgaggaccttcctcacatacagtccctctgtattcatgagatgatt
acgagaactttcaagcatcttcttagggcggttattgcatctatcaataagatggcagag
ctacctggggctatagctgcgtcattaaatttcatgcttggcctccatgggttggaaggg
agtgatggaatctccagtgaagagtcttgtctcagattacagtggctacagaaatttctc
tccactagatttggttggatacagaaagatgagttcaagcatttgaataaagtttccatt
ctccgaggactttgccagaaggttgggttagaactaattccaagagattatgacttcgat
tctccaaatccctttaagagctctgatgtttttggcttgatacctgtgtgcaagcatgtg
ctatgcgtttcatctgacggaaggacactcttggagtcatcaaaacttgctcttgacaaa
ggaaaactagatgatgctgtcaaccatggaacaaaggcattagccaagatgattgctgtc
tgtggaccttatcataaaaatactgcttgtgcgtacagccttctagccgttgtactgtac
cacactggcgattttaaccaggcaactatatatcaacagaaggctctggatataaatgaa
aaagaacttggtctcgaccatcccgacactatgaaaagctatggggatctttctgtattt
tattatcgccttcagcacattgagttggcactgaaatatgtgaaccgtgctttgtttctt
cttcatttcacttgtgggctatctcacccgaatactgctgccacatatattaatgtggct
atgatggaggaaggagtagggaacgttcatctagctctaagatacctacatgaagctcta
aagtgcaataaacgattgctaggagctgaccatattcagacagcagcaagctatcatgca
atagctgtggctctctctctcatggaagcatattcattgagtgtgcatcatgaacagact
acacttcagatacttacaaaaacacttggatcagatgaccttcgtacacaggatgctgct
gcatggcttgaatattttgaatcaagggccatagagcagcaggaagcagctcgaaatgga
atcccaaagcctgatgcttccattgcgagcaaaggccaccttagtgtagaagatcttatg
gactatataagttctgatccagacaataaaggaagtgttgttcacagaaaactgcggcgt
ctcactgtttcaccggtcagtgatagtggtgcatcagctgatgatgctacccactccgtt
gcttcacagcatggcatggctacattgaacgacgtggtagaaacaaatgtcactgagagt
aagaacgaagtaaatgatcctaatgccgttgtggatgaggtcgaaatagagacgggtgat
actttagtacacaggctaaatgtagacaaccaaactgtggaagagtcagctttaggtgag
ggctggcaagaggcttacccaaaggggagatccggaaatggtgctagaaagaaatttaga
caaaggcagccttatcagagagtgtcgcttaatagaaatctcaatggaagacaggatgtt
catcaacattatatagcttctcccttgcagaaaacgactccaagaccctcactctctaag
ccatcatctcttagggctctgaagaatggagagatagatgtcagtaaaaaaacaattaag
ccacaaataaagtctcctggttatgctgcggcgaccagtactactttggcttcaaagtca
ctctcatacaaagaggttgctttggcaccaccaggtacagttctgaagccgatgttagaa
aaattagaactgaatttggaaagaactgaaactcagatatacaggatctcaagttcatca
accggagaagaaagcaagtctgatgctgtaatgtcggatttgccaacggaaggcacagag
ctcccctgtgaaaaagaagaatcagaagaaagtgttgagtcagtagaaaatctaacgtca
gagcctgaagaggatttagtgtcctgtcgtgagcaaaaggcttctgatatcagcaggaga
aagctgtctgccgccgcagagccgtacaatcctggaggtttcttggttactgatccgcat
agtctggctgcagagcctatttccggaactggaattcattcaccaccatattacggtgct
aattacccaaatggaaatggaatgccaaaaaccatgaatccggatgcaccagagttcgtt
ccgaggagatccgtgatgaaaagctctctacatgaaggtggagatgcaagtgtatccgtt
gactccagcagtggcctagaggctgagaaaaacgcagctgcgttgaagaaggaagagctg
gcgaggcagatactacttagcttcatcgtaagttcatcccagaaggaggttgtagcatct
aagaagaaagaaaacaagcctaaagatgacttggcagatacctctgcaaaggatagtaca
gtaacagagatagtttacagaagagaagaggacagtggagtgaaggaaaatgagacggat
ggaggtgaagggtttgtcattgttgcgaagaagaggaggaagaagcgacttaccaacgat
gcagctgggatttaccatcaaccgtcgtccgtttgtgcatga
DBGET
integrated database retrieval system
