Brassica napus (rape): 106452905
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Entry
106452905 CDS
T04128
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 33A isoform X1
KO
K27472
mediator of RNA polymerase II transcription subunit 33
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bna03021
]
106452905
Transcription machinery [BR:
bna03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
Other mediators
106452905
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DUF2272
Motif
Other DBs
NCBI-GeneID:
106452905
NCBI-ProteinID:
XP_013750550
UniProt:
A0A816LZU0
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Position
C7:complement(18421280..18427170)
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AA seq
1308 aa
AA seq
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MVVPGRRTVWDGVIELTKMAQEQCVDARLWASHLSATLKPFVEFPSTELAEVLVSYICWD
NNLPLLWKFLERAMSLNLVSPLVVLALLAHRVVPNRSTQSAAYRIYLELLKRNIFRIKDH
TTGPHYDNVMNSVANILRLPELFRLETGKPGVLLVEFVFKMVSLLLDACLSDEGLIEPSQ
DSSSQWLIKSQDMEIDAPERYNEKNGSHEKLQTLNTIMAIEMVAEFLRNTVISRLLYLVS
SNRASSWHEFVRRAQVLGENSMALRSSKVLNSRDLLQLISNRRFGYSDDSKIVSLRKSNA
IVDFGSLASFAGLCHGASLSSLWLPLDLVFEDAMDGYQVNPTSAIEIITGLAKTLKEING
STWHDTFLGLWIAALRLVQRERDPIEGPIPRLDTRLCMSLCIVPLVVANLIEEGDNEFVM
EKLRDDLITSLQVLGEFPGLLAPPQCVVSAANKAATKAIMFLSGGNVGKSCSDVINMKDM
PINCSGNMRHLIVEACIARNILDTSAYSWAGYVNGRINQIPHNLPSEVPCWSSFVKGAPL
NAAMVNALVSVPASSLVEIEKVYEVAVKGSDDEKISAATVLCGASLTRGWNIQEHIVEFL
TRLLSPPVPADYSGAESHLIGYACMLNVVIFGIGSVDSIQIFSLHGMVPQLACSLMPICE
AFGSYTPNVSWTLPSGEEISAYSVFSNAFTLLLKLWRFNHPPIEHGVGDVPTVGSQLTPE
HLLSVRNSHLVSSETLNRDRNRKRLSEVARSASSQPVFVDSFPKLKIWYRQHQRCIASTL
SGLTPGSPVHQTVEALLSMMFRKVRGSQTLNPVNSGTSSSSGAASEDIIPRPEFPAWDIL
KAVPYVVDAALTACTHGRLSPRELATGLKDLTDFLPASLAPIVSYFSAEVSRGVWKPVFM
NGMDWPNPAANLSNVEEFIKKILATTGVDIPSLAPAGGSSPATLPLPLAAFVSLTITYKI
DKASERFLNLAGPALECLAAGCPWPCMPIVASLWTQKAKRWFDFLVFSASRTVFLHNPDA
VVQLLRNCFSATLGLNAAPMSNDGGVGALLGHGFGSHFYGGISPVAPGILYLRMYRALRD
TVSVTEEIFSLLIHSVEDIAQNRLSKENLKRLKTVKNGSRYGQSSLATAMTQVKLAASLS
ASLVWLTGGLGVVHLLIKETIPSWFLSVDKSDQEQRPSDLVAELRGHALAYFVVLCGAFA
WGVDSRSAASKRRQGIMGSHLQFLANALDGKISVGCETATWRAYVSGLVSLMVSCLPRWV
AEIDAEVLKSLSNGLRQWGKDELAILLLSMGGVKTMGDAVDFIIHLRS
NT seq
3927 nt
NT seq
+upstream
nt +downstream
nt
atggtggttcccggacggagaaccgtctgggacggagtaatcgagctaacgaagatggct
caggaacagtgcgtcgatgctcgtctctgggcttctcatttatcagcgaccttgaaaccc
ttcgttgagttcccgtcaacggagctagcggaggttctcgtctcgtacatttgctgggat
aacaacctccctcttctctggaagttccttgagagagctatgtctttgaaccttgtctct
cctctcgttgttcttgctctcctcgctcacagagttgttcctaaccggtctactcaatca
gcggcttataggatttacttggagcttcttaagagaaatattttcaggattaaagatcat
actaccggacctcactacgacaatgtcatgaattcagtagccaacattcttcgtcttcca
gagttatttcgtctggaaacaggcaaacctggtgtacttttagtagagttcgtctttaag
atggtgtctctgctgctagatgcatgcttaagtgatgaaggtttgatagagccaagccaa
gactcgagttcccagtggctgatcaagtctcaagatatggaaattgatgctcctgagaga
tataacgaaaagaacggatctcacgagaagttacagactttaaatactatcatggctatt
gagatggttgcagagttcctcagaaatacagtgatctccagattactgtacttggtgtcc
tccaacagggcttcgagttggcatgagtttgtccggagagcacaggtgcttggagaaaac
tcaatggccttaaggagttcaaaggttctgaattctcgggatctattgcagttgatttcg
aatagaagatttgggtattctgacgacagcaaaatagtttcattacgcaaatccaatgca
attgtggattttggatctcttgcttcttttgctggcttatgccatggagcaagtctctct
tcgctctggcttcctcttgatttggtgtttgaagatgctatggatgggtatcaagtaaac
ccaactagtgctattgaaatcattactggtctagctaaaacacttaaagaaataaatggg
agcacttggcatgacaccttcttgggtctttggatagcagctctcagacttgttcaaagg
gaaagggatcctattgaaggacctattcctagactggacacaaggctgtgcatgtcatta
tgtattgtacctctcgtggtcgcaaaccttattgaagagggagataatgaatttgtcatg
gaaaagctgcgagacgatcttattacaagtttgcaggtccttggtgaattccctgggttg
ctggctcctccccagtgcgttgtttctgctgccaacaaggctgctacaaaagcaatcatg
tttttgtctggtggaaatgttgggaagtcatgttctgatgtcataaacatgaaggacatg
cctatcaactgctctggaaacatgcgccatctgatagtagaggcttgtattgcaagaaac
atactggatacatcggcctactcatgggctggctatgttaatggtcgaatcaaccaaata
cctcataaccttccgagtgaagtaccttgctggtcgtcatttgtgaaaggggctcctcta
aatgctgcaatggtgaatgcattagtttcagttccggcttcaagcttagtagagatcgag
aaagtatatgaggtcgcagtcaaaggatcagatgatgagaagatatctgctgctacagtg
ctttgtggggcatctctcacacgaggttggaacatacaggaacacattgttgagtttctt
acaagattactatccccacccgttccagcagattattctggggctgaaagtcacttgatt
ggttatgcctgcatgctcaatgttgttatttttgggataggatctgttgacagcattcag
atcttctctttacatggcatggttccgcaacttgcttgctcactaatgccgatctgtgaa
gcgtttggatcatacaccccaaatgtatcgtggactcttccatctggagaagaaatctca
gcatattctgttttctccaatgctttcactcttcttttaaagctttggagatttaatcat
cctcctattgagcatggtgtaggagatgtgcccacagttggatcccaactcactcctgaa
catcttctttcagtgcgtaactctcatctcgtttcctcggagacccttaacagagaccga
aacagaaagagactttcagaagttgcaaggtcagcatctagccagcccgtgtttgttgac
tccttccccaagctgaagatctggtataggcagcaccagagatgcatagcttccacgtta
tctggacttacacctggatctcctgtccaccagacagttgaagcacttctcagcatgatg
ttcagaaaggtcaggggaagtcagacattaaatccagttaattccggcacaagcagttcc
tcgggagctgctagtgaagatatcattccgagacctgagtttcctgcttgggatatcctc
aaagccgttccatatgttgtagatgctgctttaacagcttgtactcatggaaggctttct
cctcgtgagttagcaacaggtctgaaagatttaacagattttctcccggcatcattagca
cctatagtaagctacttctcggctgaggtgagtagaggtgtttggaagccagtattcatg
aacggcatggattggccaaatcctgctgcaaatctatccaacgttgaggaatttataaag
aaaattctcgcaacaacaggcgttgacatccctagccttgctccagcaggagggagttct
ccggcaacgcttcctttacctctagccgcttttgtaagtctaaccattacttacaaaatc
gacaaagcttcagagcggtttctcaatctggctggtccagctctggagtgcttagctgca
ggctgcccttggccttgcatgcccattgtagcttccttgtggacccaaaaggcaaaacgt
tggtttgacttccttgttttctctgcttcccgcaccgtctttcttcacaacccagacgct
gtggttcagctcctcagaaactgcttcagtgccactctcggattgaacgctgcacccatg
tcaaatgatggtggtgttggagctcttcttggccatggtttcggctctcatttctacgga
gggatctctcctgtagcaccagggattctctatctccgcatgtatcgtgctctcagagat
accgtctctgtgacggaagagattttctccctcctgatacattccgtggaggatatagca
cagaacaggctctcaaaggagaatctgaaaaggctgaagacagtgaagaacggatcaaga
tatggacaaagctcactagcaacggcgatgacacaagtcaagcttgctgcttcgcttagt
gcatcattggtatggctaaccggcggcttaggtgtggtccacctactcatcaaagaaacc
atcccgtcttggttcttatcggttgacaagtcagaccaagaacaaagaccgtcggatcta
gttgcagagctaagagggcatgcccttgcctactttgtggtcctatgtggagcattcgct
tggggagtggactcaagatcagctgcatcgaaacgccgccaaggaatcatgggaagccac
ttgcagttcctcgcgaatgccttggacggtaaaatatcagtgggatgcgagacagcaact
tggcgggcttatgtctccggtttggtgagtctaatggtgagctgtttgccacgttgggtg
gcagagatcgatgcagaagtgttgaagagtctgagcaacggactgagacagtgggggaaa
gatgagctggcgattttgttgctatctatgggaggcgttaaaacaatgggagatgcagtt
gatttcatcattcatttgcgttcctag
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