KEGG   Brassica napus (rape): 111203984
Entry
111203984         CDS       T04128                                 
Name
(RefSeq) exopolygalacturonase clone GBGA483-like
  KO
K01213  galacturan 1,4-alpha-galacturonidase [EC:3.2.1.67]
Organism
bna  Brassica napus (rape)
Pathway
bna00040  Pentose and glucuronate interconversions
bna01100  Metabolic pathways
Module
bna_M00081  Pectin degradation
Brite
KEGG Orthology (KO) [BR:bna00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00040 Pentose and glucuronate interconversions
    111203984
Enzymes [BR:bna01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.1  Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
    3.2.1.67  galacturonan 1,4-alpha-galacturonidase
     111203984
SSDB
Motif
Pfam: Glyco_hydro_28 Pectate_lyase_3 Phage_tail_2 End_N_terminal
Other DBs
NCBI-GeneID: 111203984
NCBI-ProteinID: XP_048606117
LinkDB
Position
C3:complement(24747969..24750764)
AA seq 421 aa
MVGLRRAKTLLFVVLVVMATTIANGAKMLKENDKDEPSKGSGETIDVKASGAKGDGITDD
SKAFADAWKKACESKSPSKIKVRKGKYLVKTLEFKGPCKSAVTFEMDGHIMAPSKATPGK
PHCGWINFEKLENFNLNGHGAIFDGQGAHAWKINDCAKTGKCNTLPINIRITGLTNSKIK
GIKSTNSKLFHMNIINCKNLTLEDIGIDAPPESLNTDGIHIGRSNGVRLVRAKIKTGDDC
ISIGDGTENFLVENVECGPGHGIAIGSLGKYPNEQPVRGVTIRRSLIKNTDNGVRIKTWP
GSPPGIVSNILFQDITMDNVSLPILIDQVYCPHGHCKKGGPSKVKLSDITYRDIKGTSAS
KVAVKLLCSPGVPCTNITLSNIDFVYTGKKGPAVSACSDIKPKLKGKMEPPACTEKAKPD
S
NT seq 1266 nt   +upstreamnt  +downstreamnt
atggtgggtttgcgtcgagcaaagacactactttttgtagtactagtggttatggccaca
acaatagcaaatggggctaaaatgctcaaagaaaacgataaagacgaaccatccaaagga
agcggtgaaacaattgatgttaaagcatcaggagccaaaggagacggcataaccgatgac
agtaaggcatttgcggatgcatggaaaaaagcatgtgaatcaaaatcaccaagcaagatt
aaagtgcgaaagggtaagtatttggtaaagaccttagagttcaagggtccatgcaaaagt
gccgtcactttcgaaatggatggccatataatggctccttctaaggccactcctggtaaa
cctcattgcggatggattaatttcgaaaaactcgagaatttcaatttgaacgggcatgga
gccatttttgatggtcaaggcgcccacgcttggaagatcaatgactgtgctaaaactggg
aaatgcaacactctcccgatcaacatccggatcacaggtctcacaaactcgaaaattaaa
ggcataaaatcaacaaacagcaaacttttccacatgaacattatcaactgtaagaactta
acgcttgaggatattggtatcgatgcacctccagagagtcttaacaccgatggtatccat
attggaaggtctaatggcgtcagattagtacgtgcaaagattaaaaccggagatgactgc
atttccataggagatggtactgaaaattttcttgtcgagaacgtagaatgtggaccagga
catggtattgccatcggaagtcttggaaagtaccctaatgagcaaccagtgagaggagtc
accattaggagaagcctcatcaagaacactgataacggtgtccgcatcaagacatggcct
ggatctccccctggtatcgtctccaacattcttttccaggatatcacaatggacaatgtt
agcttacctattctcatagaccaagtgtattgccctcatggccactgcaagaaaggggga
ccatcgaaagtgaagttgtcggacatcacctacagggacattaagggcacatcagcgtca
aaggtggctgtgaaactactttgcagcccaggagtgccttgcactaatattactctctct
aacatagacttcgtatacactggtaaaaagggaccagctgtttcggcatgttctgacatc
aagcctaaactcaaaggaaagatggaaccacctgcttgcactgaaaaagctaaaccggat
tcttaa

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