Brassica napus (rape): 111208786
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Entry
111208786 CDS
T04128
Name
(RefSeq) protein transport protein SEC23-like
KO
K14006
protein transport protein SEC23
Organism
bna
Brassica napus (rape)
Pathway
bna04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
111208786
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bna04131
]
111208786
Membrane trafficking [BR:
bna04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
111208786
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_helical
Sec23_BS
zf-Sec23_Sec24
Gelsolin
Vps36-NZF-N
Motif
Other DBs
NCBI-GeneID:
111208786
NCBI-ProteinID:
XP_022563962
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Position
C8:complement(43710796..43715524)
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AA seq
760 aa
AA seq
DB search
MAEFAELESQDGVRMPWNIIPVATTKDHQPIDSEIPVSAIYTPLAHSTPLLPYAPLRCRT
CRSVLNPYSVVDFSASTWGCPFCFNRNPFPLNYSSISDTNLPPELFPRSTTVEYLSSSSS
SSPPPVFLFVVDTCLFSDELDFLRSSLSQALDLIPDVSVVGLIAFDSLVRVYELGFPHCN
KSYFFHGNRDCSKDQLLDQLSFFVKSPKPSSGVIAGVRDGLSAEDIARFLPPAADCQFTL
HSVLEELGSSQWPAAPDHRPGRCTGVALRIAACLLGACFPGSAARIMAFVGGPSTLGPGA
IVSRELSEPIRSHKDIDKDSAPCYQEAVEFYEKLAKQLVHQGHVLDVFASSVDQVGIAEM
KVAVEQTGGFVVLAESFGHSVFRDSLKRVFQSGENDLGLSSCGIFEINCSKGVKVQGIIG
PCASLEKKGPLCSDTGIGQGHTSAWKMCGLGKSTSVCLVFEIAKRETADVVLQSQINQFY
FQFLTYYQHSNGQTRLRVTTLSRRWVMGTENLQELTNGFDQEAAAVVMARLISFKMETQP
EFNPQRWADKALVNLCSRFGEYQKGNASSFNLPSQLSNFPQFVFHLRRSQFVQVFNNSPD
ETAYFRMILNRENVSNSVVMIQPWLVSFTFNSQPEPIPLDVASIAADRILLLDAYFTLVI
FHGATIAQWRKAGYHHQPEHQALVHLLQSPRDYSDTIINERFPIPRLVICDQYGSQARFL
LAKLNPSSDGNGPFSGGSNVFTDDVSLSVFLDHLRRLIVH
NT seq
2283 nt
NT seq
+upstream
nt +downstream
nt
atggcagagttcgcagagctcgaatctcaagatggagttagaatgccatggaacatcatc
cccgtcgcaaccaccaaggaccaccaacccatcgactccgagatcccagtttccgccatc
tacacacctctcgcccactccacccctctcctcccttacgctcccctccgttgccgcact
tgccgctccgtcttaaacccttactccgtcgtcgacttctccgcctccacctggggctgc
cctttctgcttcaatcgcaaccccttcccgttaaactactcctcgatctccgacaccaat
ctccccccggagcttttccctcgctccacaaccgtcgagtacctctcctcctcctcctcc
tcctctccccctcccgtcttcctcttcgtcgttgacacttgcctcttctccgacgaactc
gatttcctcagatcgtctctctcccaagccctcgatctcatccccgacgtctccgtcgtc
ggactcatcgccttcgattcgttagtccgcgtctacgagctcgggttcccgcactgcaac
aaatcttacttcttccatggaaacagagactgttccaaagatcagctccttgatcagctc
tctttcttcgtcaagagccctaaaccttcttccggcgtcatcgccggcgttcgtgacggt
ctctccgcagaagacattgctcggtttctcccaccagctgccgattgccagtttactctc
cactccgttcttgaggagcttggaagcagccagtggccggctgcacctgatcaccgcccc
gggaggtgcaccggtgttgcgcttcgtatagctgcttgtctcttaggagcttgctttcct
ggctccgctgctagaatcatggcttttgttggtggaccttccactctaggccctggagct
attgtttcccgggagctttcggaaccaatccgttctcataaggacattgataaagattct
gctccgtgttatcaagaagctgtagagttctatgagaagcttgcgaaacaacttgttcac
caaggccatgttcttgatgttttcgcgagttctgttgatcaggttggcatagctgagatg
aaagttgcagttgagcagacaggtgggtttgtggtgcttgctgaaagttttggccattcg
gtgtttagggattctctcaagcgggtgtttcagtcaggtgaaaatgatctaggcttgtcc
tcatgtggtatatttgaaattaactgctcaaagggtgtcaaagttcagggaatcattggc
ccttgtgcatctctcgaaaagaaaggaccgttatgctctgacactggcatcggtcagggc
cacacaagcgcgtggaagatgtgtggccttggtaaaagtacttccgtatgtttagttttt
gaaattgctaaaagggagacagctgatgtcgttctgcagtcgcagatcaaccagttctac
ttccagtttttaacatattatcagcactcaaatggtcaaacaaggctccgggttacaact
ctttcaagaagatgggtcatgggaactgaaaacttacaggagttgacaaatggatttgac
caagaagcagctgctgtagttatggcacgacttatttctttcaaaatggagactcagcct
gagtttaatccccaacggtgggcggacaaagctttagtaaatctatgctcccggtttgga
gagtaccaaaagggcaatgcttcttcatttaacctaccttctcagttatcaaacttccct
cagtttgtgtttcacttgcgccgatctcagtttgtccaggtctttaacaacagcccagac
gagacagcatattttcgaatgatattgaaccgagagaacgtttcgaattcagtcgttatg
attcaaccttggctggtttctttcacattcaattcacagccagaaccaattcctcttgat
gtggcatccattgcagctgatagaatcctactgttggatgcgtacttcacactcgtaata
tttcacggtgctacaatcgctcaatggagaaaagctggataccatcatcaacctgagcac
caggcacttgtgcatctgttgcagtctcctcgagactattcagatacaataataaacgaa
aggtttcccattccgcgtcttgtcatatgcgatcaatatggttcacaggctcgttttcta
ctagcaaaactgaatccttcatcagatggaaatggtcctttttccggagggagtaatgta
ttcacagatgatgttagcttgtctgtgtttcttgatcatcttcgaagactcattgttcat
tag
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