Brassica napus (rape): 111211373
Help
Entry
111211373 CDS
T04128
Name
(RefSeq) LOW QUALITY PROTEIN: ABC transporter B family member 21
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
bna
Brassica napus (rape)
Pathway
bna02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
111211373
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
bna02000
]
111211373
04147 Exosome [BR:
bna04147
]
111211373
04090 CD molecules [BR:
bna04090
]
111211373
Enzymes [BR:
bna01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
111211373
Transporters [BR:
bna02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
111211373
Exosome [BR:
bna04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
111211373
CD molecules [BR:
bna04090
]
Proteins
111211373
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_22
AAA_29
AAA_16
ABC_ATPase
RsgA_GTPase
Zeta_toxin
AAA_21
AAA_15
AAA_5
G-alpha
AAA_30
AAA_24
DUF815
SbcC_Walker_B
DLIC
DUF2585
Motif
Other DBs
NCBI-GeneID:
111211373
NCBI-ProteinID:
XP_022568116
LinkDB
All DBs
Position
C6:complement(29952296..29957248)
Genome browser
AA seq
1277 aa
AA seq
DB search
MDGIMESEEGLKVDSPNRTEAETSNSKTPKKEAKTESVRKDEKTKTVPFHKLFAFADSFD
IILMILGTIGAVGNGLGFPIMTILFGDVIDVFGQNQNSTDVSDKIAKVALKFVYLGLGTL
VAALLQVSGWMISGERQAGRIRSLYLKTILRQDIAFFDVETNTGEVVGRMSGDTVLIQDA
MGEKVGKAIQLISTFIGGFVIAFAEGWLLTLVMVSSIPLLVMSGAALAIVISKMASRGQT
SYAKAAVVVEQTVGSIRTVASFTGEKQAISSYNKHLVSAYRAGVFEGASTGIGLGTLNVV
IFCTYALAVWYGGKMILEKGYTGGQVLIIIFAVLTGSMSLGQASPCLSAFAAGQAAAYKM
FETIKRKPEIDASNTTGKVLDDVRGDIELRDVDFSYPARPEEQIFRGFSLSISSGSTVAL
VGQSGSGKSTVVSLIERFYDPQSGEVRIDGVNLKEFQLKWIRSKIGLVSQEPVLFTSSIK
ENIAYGKEDATVEEIRKATELANASKFIDKLPQGLDTMVGEHGTQLSGGQKQRIAVARAI
LKDPRILLLDEATSALDAESERIVQEALDRIMVNRTTVVVAHRLSTVRNADMIAVIHQGK
IVEKGSHSELLRDPEGAYSQLIRLQEDNKKSEDSREEQKVSMESMKRSSLRKSSLSRSLS
KRSPSFSMFGFPAGIDATNETKPEIKEEETVHKKVSFLRVAALNKPEIPMLILGSIAAVL
NGVILPIFGILISSVIKAFFKPPEQLKSDTSFWAIIFMLLGVASMVVYPAQTIFFSIAGC
KLVQRIRSMCFEKVVHMEVGWFDETENSSGAIGARLSADAATVRGLVGDALAQTVQNIAS
VTAGVVIAFVASWQLAFIVLAMLPLIGLNGYIYMKFMVGFSADAKRMYEEASQVANDAVG
SIRTVASFCAEEKVMKMYKKKCEGPMKTGIRQGIVSGIGFGVSFFVLFASYAASFYAGAR
LVDDGKTTFDAVFRVFFALTMAAVAISQSSSLSPDSSKASNAAASIFAVIDRKSKIDPSD
ESGRVLDNVKGDIELRHVSFKYPSRPDVQIFQDLCLSIRAGKTIALVGESGSGKSTVIAL
LQRFYDPDSGQITLDGVEIKTLQLKWLRQQTGLVSQEPVLFNETIRANIAYGKGGDASET
EIISAAELSNAHGFISGLQQGYDTMVGERGVQLSGGQKQRVAIARAIVKDPKVLLLDEAT
SALDAESERVVQDALDRVMVNRTTVVVAHRLSTIKNADVIAVVKNGVIVEKGKHDTLINI
KDGVYASLVQLHLSAST
NT seq
3834 nt
NT seq
+upstream
nt +downstream
nt
atggacggtataatggaatcagaggaaggactcaaggtggattcacctaacagaacagaa
gcagagacctcaaactcaaaaacccctaaaaaagaagctaagacagagtctgttcggaaa
gacgagaagacaaaaacggtgccgtttcacaagctgtttgcctttgcagattcctttgac
atcattttgatgatccttggaactattggtgctgtgggaaacggtcttggcttccctatc
atgaccatcctattcggagatgtcattgatgtgttcggacagaaccaaaacagtacagat
gtttctgacaagatagccaaggttgctctcaagtttgtataccttggcctaggaactcta
gtggcagctctactccaggtttctggttggatgatctctggggagagacaagctggaaga
ataagaagtttatatctaaaaaccatattgagacaagacatagccttcttcgatgtcgaa
acaaacacaggagaagttgttggaagaatgtctggtgacactgtccttatacaagacgcc
atgggagagaaggttggtaaggctatacagctgatatcaacatttatagggggatttgtc
atagctttcgcggaaggatggcttcttacattagtcatggtatcttcaataccactacta
gtaatgtctggtgcagctctcgctatcgtcatttcgaaaatggcttcacgtggacaaact
tcttatgccaaagccgcggttgtagttgagcaaacagttgggtctataagaacggttgca
tcgttcacaggagagaaacaagctataagcagttacaacaagcatctcgtctctgcttat
agagcaggtgtgtttgaaggagcttccacagggattggtctcggtacactcaacgttgtc
atcttttgcacttatgctttagcggtttggtacggtgggaagatgatactggagaaaggg
tacacgggaggacaagttctcatcatcatcttcgcggttctaaccggttccatgtcgtta
ggacaagcgtctccttgtttaagtgcctttgcagctggtcaagccgctgcgtacaaaatg
ttcgaaacaatcaaaagaaaaccggagattgatgcttctaatacgaccgggaaggttctt
gatgatgttagaggagatatagagcttagagatgttgactttagctacccggcgaggcca
gaagagcagatttttcgcgggttttcgctctctatctcgagtggctccacggtggcgctg
gttgggcagagtgggagtgggaagtctactgttgtgagtttgatagagaggttttatgat
ccgcagagcggtgaagtgaggatcgatggtgttaatcttaaagagtttcagctgaaatgg
atcagaagcaagataggacttgtgagtcaagaacctgttctgttcacgtcgagtattaaa
gagaacatcgcttacgggaaagaagacgctacggttgaagagattcgtaaggctacagag
cttgcaaatgcatctaagttcattgataagcttcctcagggtttagacacgatggttgga
gaacacgggactcagctttcaggtggacagaaacagaggatcgcggtggcgagagccatc
ttaaaagatccaagaatcttacttttagatgaagcaacaagcgcgcttgatgctgagtca
gagagaattgttcaagaagctcttgacaggatcatggttaatcgtacaactgttgttgtc
gctcatagattgagcaccgtgagaaacgcagacatgattgctgtgattcatcaaggaaag
atcgttgagaaaggttctcactctgagctcctaagagaccctgaaggagcttactctcag
ctcatacgtcttcaagaagataacaaaaagtctgaagactcgagggaagagcagaaggta
tcaatggagtctatgaaacggtctagcttgagaaagtcatcgctaagccggtctttaagc
aaaagatcaccttctttctccatgtttggctttccagcaggcatagacgcaaccaacgaa
accaaaccagagatcaaggaagaagagacagtacacaagaaagtatcattccttagagta
gctgctttaaacaaaccagagattccaatgcttatacttggatccatagccgctgttctt
aatggagtgatacttcccatctttgggatcctcatctcaagcgtgatcaaagcgtttttc
aaaccacctgagcagttaaaatccgacacaagcttttgggcaatcatcttcatgcttctt
ggtgtagcttcaatggtggtctacccggcgcaaaccatctttttttctatagccggatgt
aaacttgtgcagcggataagatcgatgtgttttgagaaagtggttcacatggaagtcgga
tggttcgatgagactgagaactcgagtggtgctattggagctaggctttctgctgatgct
gctacggttcgcggtcttgttggagatgcattggctcaaaccgtacagaatattgcttct
gtaacggctggtgtggtcattgccttcgtggcgagctggcagctagctttcattgttttg
gcgatgcttccgttgattgggcttaacggctatatttacatgaagttcatggttggcttc
agtgcagatgcaaagagaatgtacgaggaagcgagccaagtagcgaacgatgcggtgggg
agcataagaacggttgcttcattctgtgcagaggagaaagtgatgaaaatgtataagaag
aaatgtgaaggtcctatgaagacaggtatacgtcaaggcatagttagcggtatcggtttc
ggagtttctttcttcgtcctctttgcttcttacgcagccagtttctatgccggtgcaagg
cttgtcgatgacggaaaaacaacctttgatgcggttttcagggttttcttcgctttgaca
atggcggctgtagctatttctcagtcgagttcactgtctcctgattccagcaaagctagc
aatgcggctgcatccatcttcgcggttatagacagaaaatcaaagattgatccgagtgat
gagtctgggagagttcttgataatgttaaaggagatattgaacttcgtcatgtcagtttc
aagtatccttcaagaccagatgttcagatcttccaagatctttgtctgtctattcgagcc
ggaaagacaatagctttggttggagagagcggaagcgggaaatcgacagtgattgctttg
ctgcagaggttttacgatcctgattcaggtcagatcactcttgatggagttgagattaag
accttgcagctgaaatggctaaggcagcaaacaggactggtgagccaagaaccggttttg
ttcaatgaaaccatcagagcaaacattgcttatggaaaaggaggagatgcttctgaaacc
gagatcatatctgcagctgagctatctaacgctcatggcttcattagtggtctacaacag
ggttatgatacaatggtgggtgagagaggagttcaattatcaggcgggcagaagcagaga
gtggctatagcgagagcaattgttaaagaccctaaggtgctgctgctggatgaagcaaca
agcgctctagacgctgagtcagagcgtgtggtgcaggacgcattggacagggttatggtt
aacagaaccaccgtggtggtggcacatcggttatcaacaatcaagaacgcagatgtaatt
gcagtggtgaagaatggtgttatcgttgagaaaggaaagcatgacactttgattaatatc
aaagatggtgtctatgcttctttagtacagcttcatctgagtgcttctacataa
DBGET
integrated database retrieval system
