Brassica napus (rape): 125574804
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Entry
125574804 CDS
T04128
Name
(RefSeq) protein LHY-like isoform X3
KO
K12133
MYB-related transcription factor LHY
Organism
bna
Brassica napus (rape)
Pathway
bna04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
125574804
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bna03000
]
125574804
Transcription factors [BR:
bna03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-factors
125574804
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-binding
Myb_DNA-bind_7
Myb_DNA-bind_6
Motif
Other DBs
NCBI-GeneID:
125574804
NCBI-ProteinID:
XP_013703327
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Position
C3:complement(14026655..14030384)
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AA seq
555 aa
AA seq
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MDTNTSDGPGEELLTKARKPYTITKQRERWTEDEHDRFLEALRLYGRAWLRIQEHIGTKT
AVQIRSHAQKFFTKLEKEAEAKGIKALDIEIPPPRPKRKPNVPYPRKPGPSSSQCNQPQK
TSTGKENQEENCSGVNKYPLPNKVVTPGKLKTFMESSDPSLRKASADNETSKASNVDNNM
VHKENKDRDDDGLHSARHHPATKTSPSAATTTTSHQAFPAFSFCSFLHMSSTFSNLIMST
LLQNPAVHAAATFAASALPFTTNAGASSTQMSSSPPTIAAIVAATVAAATAWWASHGLLP
TPVPLPAVSVPTPAAMDNVRNDQLEKQSTAFQEQNMASKSPDSSSDDSEETGITKLKADG
DKEEVVAALQDSNVSHKKNPVDRSSCGSNTPSGSDVETDALEKEKEADANQPSVIELSNR
RSKIRDNNNNQTTDSWKEVSQGGRIAFQALFARERLPQSFSPPQAAEDLNGKQISDTSMP
LAHNNLNKIQDSCKADQESAVDEEPGKSLKMRETGFKPYKRCSMEAKESQVGNANNHNDE
KVCCKRLRLEAEAST
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atggatacaaatacatctgatggacctggtgaagaattattaactaaggcaagaaagcca
tatacaataacaaagcagcgagaacgatggactgaggacgagcatgataggtttcttgaa
gccttgaggctttatggacgagcttggctacgtatccaagaacatattgggacaaagact
gctgttcagatcagaagccatgcacaaaagttcttcacaaagttggagaaagaggctgaa
gccaaaggcattaaagctctggacatagagattccacctcctcgtcctaaaagaaaaccc
aatgttccttatcctcggaaacctggcccatcttcttcacaatgtaaccagcctcagaaa
acatcaactgggaaagaaaatcaagaagagaactgctcaggggtgaacaagtatccctta
ccaaataaagtagtaactccagggaaactaaagacattcatggaatcttctgatccgtcg
ttaagaaaggcaagtgccgataatgaaacaagcaaggcttcaaatgtggacaacaacatg
gttcataaggagaacaaagacagagatgatgatggtctgcacagcgcaaggcatcatcca
gctactaaaacttcaccatctgctgctactactacaacttcccatcaagcgtttccagca
ttctctttctgctcgtttctccacatgtcttctactttctccaatcttatcatgtctaca
ctcctacagaatcctgctgttcatgctgcagccacattcgctgcttcggccttgcccttt
actactaatgccggagcctcatcaacgcaaatgagctcttctcctccaactatagctgcc
atcgttgctgctacagtagctgccgcaactgcttggtgggcttctcatggacttcttcct
actccagtcccattaccagccgtctcagttccaactccagctgctatggataacgtccga
aatgatcaacttgagaaacaaagcacggcctttcaagaacaaaacatggcttcaaaatct
ccagattcatcatccgacgattcagaggagactggaattaccaagctaaaggctgacggt
gacaaggaggaagttgttgctgctttgcaagattcaaacgtttcccacaagaaaaatcca
gtggaccgctcatcgtgtgggtcaaacacaccttcaggcagtgacgtggaaacagacgca
ttggagaaagaaaaagaggcagatgcaaaccagccaagtgttattgagttaagcaaccgt
cggagtaaaatcagagacaacaacaacaaccaaactactgattcatggaaggaagtctct
caagggggtcgtatagcatttcaggctctctttgcaagagagaggttgccacaaagcttt
tcacctcctcaagcagcagaggatttgaatggaaaacaaattagcgacacgtcaatgcca
ttggctcataataacttgaacaagattcaagattcttgtaaagcagaccaagaaagcgca
gtggatgaagaaccggggaagagtcttaaaatgagagagacagggtttaagccatacaag
agatgttccatggaagcgaaagagagccaagttggaaacgcaaacaatcacaatgatgaa
aaggtctgctgcaagaggcttcgtctggaagcagaagcttcaacataa
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integrated database retrieval system