Brassica napus (rape): 125575639
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Entry
125575639 CDS
T04128
Name
(RefSeq) protein LHY-like isoform X1
KO
K12133
MYB-related transcription factor LHY
Organism
bna
Brassica napus (rape)
Pathway
bna04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
125575639
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bna03000
]
125575639
Transcription factors [BR:
bna03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-factors
125575639
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-binding
Myb_DNA-bind_7
Myb_DNA-bind_6
Motif
Other DBs
NCBI-GeneID:
125575639
NCBI-ProteinID:
XP_048627650
LinkDB
All DBs
AA seq
586 aa
AA seq
DB search
MDTNTSDGPGEELLTKARKPYTITKQRERWTEDEHDRFLEALRLYGRAWQRIQEHIGTKT
AVQIRSHAQKFFTKLEKEAEAKGIKALDIEIPPPRPKRKPNAPYPRKPGPSSSQAKQLVS
SSECNQQAFLDLEKVPLPEKISTGKENQEENCSGVNKYPLPNKVVTPGKRKTFMESSDPS
LRKASADNETSKASNVDNNVVHEKNKDRDDDDDDDDDGGLHSARHHPATTTSPSAATTTT
SHQAFPAFRFQHDYRSFLHMSSTFSNLIMSTLLQNPAAHAAATFAASAWPFTTNAGDSST
QMSSSPPTIAAIVAATVAAATAWWASHGLLPTPVPLPAVPVPTPAAMDNVGNDHLEKQST
AFQEQNMASKSPDSSSDDSDETGITKIKADGDKEEVVAALQDSNVSHKKNPVDRSSCGSN
TPSGSDVETDALEKEKEADANQPSVIELGNRRSKIRDNNNNQTTDSWKEVSQGGRIAFQA
LFARERLPQSFSPPQVEENVNGKQISDTSMPLAHNNLNKIQDSCKADQESAVDEEPGKSL
KMRETGFKPYKRCSMEAKESQVGNANNHNDEKVCCKRLRLEAEAST
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atggatacaaatacatctgatggacctggtgaagaattgttaactaaggcaagaaagcca
tatacaataacgaagcagcgagaacgatggactgaggacgagcatgataggtttcttgaa
gccttgaggctttatggacgagcttggcaacgtatccaagaacatattgggacaaagact
gctgttcagatcagaagccatgcacaaaagttcttcacaaagttggagaaagaggctgaa
gctaaaggcattaaagctctggacatagagattccacctcctcgtcctaaaagaaaaccc
aatgctccttatcctcggaaacctggtccatcttcgtcgcaagcgaaacagcttgtatct
tcttcagaatgtaaccagcaggccttcttggatttggaaaaggtgccccttcctgagaaa
atatcaactgggaaagaaaatcaagaagagaactgctcaggggtgaacaagtatccctta
ccaaataaagtagtaactccagggaaacgaaagacattcatggaatcttctgatccgtcg
ctaagaaaggcaagtgccgataatgaaacaagcaaggcttcaaatgtggacaacaacgtg
gttcatgagaagaacaaagacagagatgatgatgatgatgatgatgatgatggtggtctg
cacagcgcaaggcatcatccagctactacaacttcaccatctgctgctactactacaact
tcccatcaagcgtttccagcattccgtttccagcatgattaccgctcgtttctccacatg
tcttctactttctccaatcttatcatgtctacactcctacagaatcctgctgctcatgct
gcagccacattcgctgcttcggcctggccctttactactaatgccggagactcatcaacg
caaatgagctcttctcctccaactatagctgccatcgttgctgctacagtagctgccgca
actgcttggtgggcttctcatggacttcttcctactccagtcccattaccagccgtccca
gttccaactccagcagctatggacaacgtcggaaatgatcaccttgagaaacaaagcacg
gcctttcaagaacaaaacatggcttcaaaatctccagattcatcatccgacgattcagac
gagactggaattaccaagataaaggctgacggtgacaaggaggaagttgttgctgctttg
caagattcaaacgtttcccacaagaaaaatccagtggaccgctcatcgtgtgggtcaaac
acaccttcaggcagtgacgtggaaacagacgcattggagaaagaaaaagaggcagatgca
aaccagccaagtgttattgagttaggcaaccgtcggagtaaaatcagagacaacaacaac
aaccaaactactgattcatggaaggaagtctctcaagggggtcgtatagcatttcaggct
ctctttgcaagagagaggttgccacaaagcttttcacctcctcaagtggaagagaatgtg
aatggaaaacaaattagcgacacgtcaatgccattggctcataataacttgaacaagatt
caagattcttgtaaggcagaccaagaaagcgcagtggatgaagaaccggggaagagtctt
aaaatgagagagacggggtttaagccatacaagagatgttccatggaagcgaaagagagc
caagttggaaacgcaaacaatcacaatgatgaaaaggtctgctgcaagaggcttcgtctg
gaagcagaagcttcaacataa
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