Brassica napus (rape): 125590708
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Entry
125590708 CDS
T04128
Name
(RefSeq) probable RNA-dependent RNA polymerase 5 isoform X1
KO
K11699
RNA-dependent RNA polymerase [EC:
2.7.7.48
]
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
bna03036
]
125590708
Enzymes [BR:
bna01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.48 RNA-directed RNA polymerase
125590708
Chromosome and associated proteins [BR:
bna03036
]
Eukaryotic type
Gene silencing
RNA interference (RNAi) pathway
RDRC (RNA-directed RNA polymerase complex)
125590708
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RdRP
Motif
Other DBs
NCBI-GeneID:
125590708
NCBI-ProteinID:
XP_048620373
LinkDB
All DBs
Position
C7:2586680..2591678
Genome browser
AA seq
958 aa
AA seq
DB search
MITWQRSVIVLSSRLESVLEKIYRKHKCPPINEESRQRLSSIPEDLAFDLLRKAFNSPGI
SNLDRFIASKLTHAVTVTSSPTKSAPCSSQEEISIHSEAPSLRRQQVNGGSSLHIPPPQL
LLALSELEFNKAFLLLTYIPGKDLSQVTITADEIRGWKDLSMVAYEAAVWDSLGHKFCSP
TDRRLSLECDNEKTSYYHCHVASDGSYTFKGPLLEPTGTHLHKVLGDANVLTVKFEDVPR
NSSTDRYTTYRRIAKNGIMLGLRRYQFFVFKDGGKEEKKKDFSTKGVKCYFIRTDSTSAN
DMGSPYIFSGKSVYEARMHFMHVHTLPSLANYMARFSLILSKTKKLEVDMTGITFEKIDD
IHCHDQNNNDVLDKNGKPCIHSDGTGYISEDLARMCPVNILKGKCLRNDNVQTPVQDPPL
LIQFRMFFDGYAVKGTFLLNKKLPPRTVQVRPSMIKVSKDPALSDFSTFDSLEVVTTSNP
PKRTKLSKNLVALLSYGGIPDEFFLDILLNTLEEYKTIFNNKRAALKAALNYGDMDDQNA
AQMILVGIPLDEPHLKDHLSILSNTEKNDLRAGKLPVSESYYLMGTVDPTGELKEDEVCV
ILESGQISGNVLVYRNPGLHFGDIHVLKATYVKALEGYVGNSKYGVFFPQKGPRSLGDEI
AGGDFDGDLYFISRNPELLEHFKPSEPWVSLTPPTKGNSARKPSHLSPAELEEELFDMFL
KARFNASNVVGMAADSWLTIMDRFLVLGDENAEEKAEMKKKMLKLIDIYYDALDAPKKGA
KIFLPDELRPDIFPHYMERDQKFKSTSILGMIYDFVKSQTAEEHKPSAEISKLACFEDEP
VSDYHKKKWGQLYEKYRKEMIQAMGNKDESANEVIQRYKQEFYDAAGFEDNKKSIEELYP
QALALYNVVYDHAIIMDNVRNCGFAWKVAGPILCRFYLEKKQGKSLLCSLPMLKELWG
NT seq
2877 nt
NT seq
+upstream
nt +downstream
nt
atgataacttggcagcgatcagtgatcgttctttcgagtaggctcgaatctgttttggag
aagatataccgcaaacacaaatgtcctcccataaacgaagagtcaaggcagagactttct
tcgattccagaagatttagctttcgatttgctcaggaaagcttttaattctccggggata
tccaacctcgaccgcttcatcgcctctaagcttacccacgccgttactgttactagctct
ccgacgaagtctgctccttgttcctctcaagaagagatatctattcattctgaagctcct
tctttgagaagacaacaagtcaatggaggatcttctcttcacattcctcctcctcagctc
ttactagctttgagtgaacttgaattcaacaaggcctttctcttgcttacctacattcct
gggaaagatctgagtcaggttacaataactgctgatgagattagaggatggaaggatttg
tctatggttgcttatgaagctgccgtttgggacagtttgggacataaattttgttcccca
acagaccgtagattgtcactggaatgtgataatgagaagactagctactaccactgtcat
gttgcttcggatggcagttacacattcaagggccctcttcttgaacccactggaacacac
ctgcataaggtcttgggtgatgctaatgttttgacggtcaaatttgaggatgtcccgaga
aactcatcaaccgaccgttacactacataccgaaggattgccaagaatggtatcatgctt
gggttacgtcgttatcaattttttgttttcaaagatggtggaaaagaagaaaagaagaaa
gacttttctacaaagggagtgaaatgctacttcatacgcacagactccacatctgcgaat
gatatgggaagtccctacatcttctccgggaagtcagtttatgaagctcgcatgcatttt
atgcatgtccacacattgccatctttggccaactacatggcaaggttttcattgattcta
tcaaagactaagaagcttgaagttgacatgactgggatcaccttcgagaaaatcgatgat
atacactgccatgatcaaaacaataatgatgttcttgataagaatgggaaaccatgtata
cattcagatggcactggctacatctctgaagatcttgctcggatgtgtccagtaaacata
ttaaaaggaaaatgtctcagaaatgataatgttcaaacccctgttcaagacccgcctctt
ctgatccagtttcggatgttttttgatggctatgctgttaagggaacttttctcttaaac
aagaaacttcctcctcggactgtccaggttcgaccttctatgatcaaggtctctaaagat
ccagctttgtcagattttagcacttttgattccctagaggttgtcacaacaagtaatcca
cctaaaagaacaaagttatcaaaaaacttggttgcgctgcttagctatggaggaatccct
gatgaattctttctggatatattgctcaacaccctggaagagtacaaaaccatcttcaac
aacaaacgtgctgctcttaaagctgcccttaactatggggatatggacgatcagaacgct
gcacaaatgattttggttggtatcccacttgacgaaccacacttgaaggatcatttgtct
attctttcaaacacagagaagaatgatctcagagcaggaaagcttcctgtgagtgaatca
tactacctcatgggtactgttgatcccaccggagagttgaaggaagatgaagtctgtgtc
atccttgagtctggccaaatctcaggaaatgttctagtttacaggaatcctggactacat
tttggggacatacatgtacttaaggctacttatgttaaggccttggaggggtatgtagga
aactccaagtatggtgtcttctttcctcagaaaggtccaagatctttgggagatgagatt
gcaggtggtgattttgatggtgatttgtatttcatctccagaaatccagagctacttgaa
cacttcaaaccaagtgagccgtgggtgagtttgactcctcctactaaaggcaactctgct
agaaagccaagccatctttcaccagcggagctggaggaagagcttttcgatatgttcttg
aaggcaagatttaatgctagcaatgttgtagggatggctgctgatagctggttaacaata
atggaccgcttcctcgtgctaggagatgagaacgctgaggaaaaagctgaaatgaagaag
aaaatgttaaagttgattgatatatactatgatgctcttgatgcaccaaagaaaggtgct
aagatctttctcccagacgagctgaggcctgacattttcccacactacatggagcgtgat
cagaaattcaagtccacttctattcttggaatgatctatgactttgttaaatcacagaca
gcagaggaacacaaaccatcagctgagatcagtaaacttgcgtgtttcgaagatgagcca
gtctctgattatcataagaagaaatggggacagttgtatgaaaagtacagaaaggagatg
atccaggcgatgggtaacaaagatgaatcagccaatgaagttatccagagatacaagcag
gagttctatgatgctgcagggtttgaagacaacaagaaaagtatcgaagaactttatccg
caagccttggcactttacaacgtcgtttacgaccatgcaatcataatggataacgttcga
aactgtgggtttgcctggaaggttgcaggaccgatcctgtgcaggttctaccttgagaaa
aagcagggaaaatccttactgtgttcactcccaatgcttaaagagctttggggttga
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