Bifidobacterium animalis subsp. lactis CNCM I-2494: BALAC2494_00229
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Entry
BALAC2494_00229 CDS
T01842
Name
(GenBank) Hydrolase acting on acid anhydrides in phosphorous-containing anhydrides
KO
K03723
transcription-repair coupling factor (superfamily II helicase) [EC:
5.6.2.4
]
Organism
bnm
Bifidobacterium animalis subsp. lactis CNCM I-2494
Pathway
bnm03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
bnm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BALAC2494_00229
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bnm03400
]
BALAC2494_00229
Enzymes [BR:
bnm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BALAC2494_00229
DNA repair and recombination proteins [BR:
bnm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
TRCF (transcription-repair coupling factor)
BALAC2494_00229
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
TRCF
UvrB_inter
CarD_TRCF_RID
Helicase_C
ResIII
RecG_dom3_C
Nuc_rec_co-act
AroM
Motif
Other DBs
NCBI-ProteinID:
AEK30472
UniProt:
A0A806FVY1
LinkDB
All DBs
Position
complement(1165756..1169502)
Genome browser
AA seq
1248 aa
AA seq
DB search
MPADPATPTTTRSTGCSANSMPHSASNFPSSLPTVQMPRRRSYSKASRKLRINSMPDDKA
RHSNANRSAEETYNELMNGSLLSLRQRLLEDQAFAGLVEGHVDAGEDADPSILVGAPNGI
RPALAAASADRKPVVIVVPSGREAEDLVGDLRSWYDGDPNEVAQLMAWETLPHERLSPRA
DTVANRMETFYRLCHPQSDSEMFGPIRILVMPVRSLIQPVVAGIGDVKPLVFAQGEEITL
EDAVQGLVRNSYTRVDLVMDRGEFAVRGGIIDVFVPTEPHPVRIEFFGDEIDTIRRFHSS
DQRTYGEPIRSVWATPCRELQLTEGIRERAQSLIGQIPNADDLLESIANAIPQEGMESLI
PALVDDLEPVSSMLPRDCIVMLFDPERLRRAVDDLMKTANEFLATSWHVAASGHGAGAPI
SFEAANFLDLDEVVGQLTYSNHELWKVSGFTVDQSLPGHVQIDAVAPQDLHGSGEKAEDH
LGELIRKDYAVVITAAAQGTLSRLKRMLNEIGVVHFDTIRSQAQDGFIDHASKTALLTER
DLTGRTSVAAGVKTARKRRKSIDLMELKPGDFVVHEQHGIGRFIEMRQRTTGSGKNQATR
EYLVIEYAPSKRNAPPDKLFIPTDQLDQVSKYIGAEIPKLNKLGGSDWAQTKAKAKKHVH
EIAQNLIRLYSARQRAKGFAFSKDTPWQKELEDAFPYQETADQLTTIDDVKADMEKPIPM
DRLICGDVGFGKTEIAIRAAFKAVQDSKQVAVLVPTTLLVQQHLQTFTERFEGFPVNVRA
MSRFQSTKEINETIKGLADGTVDVVIGTHKLLNPKIKFKDLGLVIIDEEQRFGVEAKETL
KAVRTNVDVLSLSATPIPRTLEMAVTGIREMSTLATPPEDRLPVLTYVGAYEDAQVTAAI
RRELLRGGQVFYIHNRVEGIEEKAKRLQDLVPEARIGIAHGKMGRKQLDQIIRDFWHRDI
DVLLCTTIVETGLDISNANTLIVDRADRFGLSQLHQLRGRVGRGRDRAYAYFLYDPSKPM
TEQSHERLVTIAQNTALGSGFDVAMKDLELRGTGNLLGDEQSGHIEGVGFDLYVRMVSEA
IEDYKDPERTEPVAVTIDLPIEASIPVDYIGSDKLRLEVYRKLAGARSEKDLNELRDELT
DRYGKPPKVFESLFDVARLREKARALGISEIIGQGRKLRISKIDPAESVQLRISRIYPGA
QYRPMLNAYTIPTPFEGSMGSGPMESDEVLRWTEQLLDDLAWSAKPVK
NT seq
3747 nt
NT seq
+upstream
nt +downstream
nt
atgccagccgatccggcgacgcccacgacaacacgatcaactgggtgctcggcgaattca
atgccgcacagcgcaagcaacttcccgagttccttgccgacggtgcagatgccgcggaga
cgatcgtattcgaaggcctcacgaaagctcaggataaattcaatgcccgatgacaaggca
aggcacagcaatgcgaaccgatcggcggaggagacctacaacgagctgatgaacggttcg
ctcctctccctcaggcagcgtcttttggaggatcaggcattcgccggtttggtggaaggc
catgtggatgcgggcgaggacgccgacccgagcatcctcgtcggagctcccaacggcatt
cgtccagcactggccgccgccagtgcggaccgtaagccagtggtcatcgtcgtcccctcc
ggtcgcgaggcggaggatctcgtcggcgatctgcgatcgtggtatgacggcgatccgaat
gaggtggcacagctgatggcatgggagacgctgccccacgagaggcttagcccacgcgcc
gacacggtggcgaaccgcatggagacgttctaccggttgtgccacccgcagtccgacagc
gagatgttcggcccgatacgcattctggtcatgccggtgcgttcgctcatccagccggtg
gtggctggcataggtgacgtgaagccgctcgttttcgcgcaaggtgaggaaatcaccctt
gaagatgccgtgcagggcctcgtccgcaattcctatacgcgcgtcgatctggtgatggac
cgtggcgagttcgcggtgcgtggcggcatcatcgacgtgtttgttcccaccgaaccgcat
ccggtgcgcatcgagttcttcggtgacgagatcgacacgatccgccgcttccattcctcc
gaccagcgcacctatggtgaaccgatcaggtcggtgtgggccacaccatgccgtgagctg
caactgaccgagggcatacgagagcgtgcgcaatcgttgatcgggcagattccgaatgcc
gacgatcttctggaatcgatagccaacgcaatcccgcaggagggcatggagtctctcatc
ccggcattggtggacgacctcgaaccagtttcgagcatgctgccgagggattgcatcgta
atgctgttcgacccggaacggctgcgtcgtgcagtggatgacctgatgaagacggcgaac
gagttcctcgccaccagctggcatgtggccgcatcgggacatggcgcgggtgcgccgatc
tccttcgaagccgcgaacttccttgatcttgatgaggtggtgggccagctcacctactct
aaccatgagctatggaaggtgagcgggttcactgtggaccagtcactaccggggcacgtg
cagatcgatgcggtggcgccacaggatctccacggcagtggcgagaaggccgaagaccat
ctcggcgagctcattcgcaaggattacgcggtcgttatcacagccgcggcacagggcacg
ctgagccgcctcaagcgcatgctcaatgagatcggcgtcgtgcatttcgacacgattcgt
tcgcaggcgcaagacggttttatcgaccacgcgtcgaagaccgcgttgctcaccgagcgc
gacctcaccggccgcaccagtgtcgccgcaggggtcaagacggcacggaaacgacgcaaa
tccattgatcttatggaattgaaaccgggcgatttcgtggtgcacgaacagcacggcatc
ggtcggttcatcgagatgcgccaacgcacaaccggctcgggcaagaaccaggccacccgc
gagtacttggtcatcgaatacgcgccgagcaagcgcaatgcgccgccggacaagctgttc
atacccaccgaccagctcgatcaggtgagcaagtacatcggtgctgagattcccaagctc
aacaagctcggcgggtcggattgggcgcagaccaaggcgaaggcgaagaagcatgtgcat
gagatcgcgcagaacctcattcgcctgtattccgcgcgtcaacgtgccaagggattcgcg
ttcagcaaggacaccccgtggcagaaggagctcgaggacgccttcccataccaggagacg
gcggaccagctcaccacgatcgacgacgtcaaggccgatatggagaaaccgattcccatg
gaccgtctcatctgcggagacgtaggcttcggcaagaccgagatcgcgatccgcgccgcg
ttcaaggcggtgcaggattccaagcaggtggctgtgctcgtgccgacgaccctgctcgtg
cagcagcatctgcagaccttcaccgaacgttttgagggcttcccggtgaatgtacgcgcc
atgagccgattccaaagcacgaaggagatcaatgagacgatcaagggtcttgccgacggc
accgtcgatgtggtgataggcacccataagctgctgaatccgaagatcaagttcaaggac
ctgggccttgtgatcatcgacgaggagcagcgttttggtgttgaggcgaaggagacgctc
aaggccgtacgtacgaatgtcgatgtactgagcctgtcggccacgccgattccacgcacg
ttggagatggctgtcacgggcattcgcgagatgtccacgctggcgactccgcccgaggac
cgcctgcccgtgctcacctatgtgggcgcctatgaggacgcgcaggtcaccgcggcgatt
cgacgtgaactgttgcgcggcggtcaggtgttctacatccacaaccgtgtcgagggcata
gaggagaaggccaagcgtctgcaggacctcgttcccgaagcccggataggcattgcccat
ggcaagatgggacgtaagcagctcgaccagatcatccgcgatttctggcatcgtgacatc
gatgtgctgctgtgcacgacgattgtcgagacgggtctggatatctcgaatgcgaacacg
ctgattgtggatcgtgccgaccgattcggcctctcccaattgcaccagctccgtggacgt
gtcggccgaggccgtgatcgtgcctatgcctatttcctgtacgatccgagcaagccgatg
accgagcagtcccacgaacgcctggtcaccattgcgcagaacaccgcattggggtccggc
ttcgacgtggccatgaaggatctcgagttgcgcggcaccggcaacctgctgggcgatgag
cagagcggacacatcgaaggcgtgggcttcgacctctatgtgcgtatggtgagcgaggcg
atcgaggattacaaggatccggaacgcacggaaccggttgcggtcaccatcgacctgccg
atcgaggcatcgatacccgtggactacatcggttccgacaagctgcggctggaggtctac
cgcaaactggccggtgcccgcagcgagaaggatctgaacgagttgcgcgacgaactgacc
gaccgctacggcaagccgccaaaggtgttcgaatcattgttcgacgtggcgcgtcttcgt
gaaaaggcacgcgcgcttggcatcagcgagatcatcggccagggcaggaagctgcgcatc
tcgaagatcgaccctgccgaatcggtgcagctgcgcatctcgcgcatctacccaggtgcc
caataccggcccatgttgaacgcgtacaccatacccacgccgttcgaaggttcgatgggt
tccggtccgatggaatcggatgaggtgctgcgttggaccgagcagctcctcgacgatcta
gcgtggtctgcaaagcctgtgaagtag
DBGET
integrated database retrieval system
