KEGG   Brettanomyces nanus: FOA43_000457
Entry
FOA43_000457      CDS       T07002                                 
Name
(RefSeq) uncharacterized protein
  KO
K10777  DNA ligase 4 [EC:6.5.1.1]
Organism
bnn  Brettanomyces nanus
Pathway
bnn03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:bnn00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    FOA43_000457
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:bnn03400]
    FOA43_000457
Enzymes [BR:bnn01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     FOA43_000457
DNA repair and recombination proteins [BR:bnn03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    DNA Ligase 4 complex
     FOA43_000457
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N AIM24 BRCT_2 DNA_ligase_A_C mRNA_cap_enzyme NLRX1_C
Other DBs
NCBI-GeneID: 62193858
NCBI-ProteinID: XP_038776716
LinkDB
Position
1:join(974519..977323,977375..977444,977585..978714)
AA seq 1334 aa
MSDEAQLVSFSSLVVSKPQNHGGLPKFKQLVDDLFLPVERITRNLQLGISLKKADVIERF
IRNYRQTVGNDILPVAHLFFPKWDRDRVYMMKEYRLGHLVCQYLNLGKNSDDYKTIANWK
RLSYNRVHATVKFSDLLVKVILERRVRPVIKDSLGVDDINDMLDKLQGFAQDSKLDQMKL
IKEAIDRLTDSELRFFFRIVLKTDPIGSESVFLRCWHRDAKKLYDLTHDLKLVFWGLSDP
NFQLSDKEKEIQLMLPFTPQRCQRVRDQYVKIPSENFNDGPFFIEEKFDGERIQVHIKRV
DGERFQFKYYTRNAMDYTSIYGEFSTSLRGCLSPFLGPENFDLHMHSCILDGEMICYDPI
LKVPLPYSVLKTSALHSLSAKPGSKNPHPMFVAFDCVFVNGESLEKYPLERRKKVLSYVL
KKPIANLFVAADFIVARTGDEIEKAMDRAIGMDSEGLVLKSIQSKYDIGATTKQWIKIKP
EYLEEFGENLDLVVVGKIPGIKSSFLCGLRDDNDSGCKFMTLCKISNGFSQDDYRHIDRV
TAGKWKDINMDPPNDNLVKFGKTLPVVWIDPRDSVVIEARARSITRQPEQEFYATDTTLY
NAFCVKIRTDKDWKTASTLKEYEQSSNQSKLYNAQNVIGNESKKRRIGYPSKKITMLQKL
NEEYEVGGLAPKSNLFESYIFSIRTDCIYLGKLVRIRELNQIVSDNGGALARNPESVVLD
TDKHERLMVIAEKMTIEVKDLSNKYNVFRFKWCEDCLAVKELIEPDLTHILVAEPSLEED
CRKRLDKFGNNLVTPLTEYTLWKMVPSEERNEVNLSQEELNRYHSFFVFYKMKFKVIFSA
ENARIGSIVAQEIEINGGKVCESLEEASMIVVVLFKVDKQNSFESYSSTTAIVQRTMRQR
NELRKLCKRIPRVVSHSYIRACTTSSSLVDPAEYKRAQFADLEACEQIEKLGKDGCLVIP
PIIKASVVDDTDVPGNVSTLKIARNEKYAIEFTKDEPVMETLGNPKSTLSLTIPPSVPVY
VKRGSLISIFMADSGANLDTAVTSTLRINQPIRRFLYGGFTSTYQRLLSTVSLNLMISAY
SKGGPLSSFMFSTKAQSTKTFCNIAMDGTMDWALLDPKSLHVYTGNNLLVTSQMLPKKTN
GKKKLDTGLYSLFQSGYTLLTGRGYVSLVGSGSIFKLGLARDEEIYIKQANLLATTIKDV
SELSSGYFIGKNIDNKTFAKSVKVKAKKEVGLGELETTKSRLSWFGAFKSMLVKVLSILA
SSQARVSKLVAFNGRYIKVKGPRTLLIQTSSGLDKFVYNSTLLGRSKFRGSITDVEKFIR
NKQQLSKPETEIHK
NT seq 4005 nt   +upstreamnt  +downstreamnt
atgtctgatgaagctcagttggtctcattcagctccttggttgtatcaaagccccagaat
catggcggacttccgaaattcaaacagttagtggatgatctttttttgcctgttgagaga
atcactagaaaccttcagctcgggataagcttgaagaaagcagacgtcatagagagattt
attcgcaactaccgtcaaactgttggtaacgatatattaccagttgcgcatttatttttc
cctaaatgggacagggaccgtgtctacatgatgaaagagtacagactcggccaccttgta
tgccaatacttgaacttggggaagaacagcgatgattacaagacaattgcgaactggaaa
cggctctcctataatagggttcatgctactgtcaagttttcagatttgcttgtaaaagtg
attctcgaaagaagagttcgaccggtaatcaaagattcactgggagtcgatgacatcaat
gatatgctagataaattgcaaggatttgcccaggattcaaaactcgatcagatgaagttg
attaaagaagctatagataggctgaccgacagcgagctacgtttcttctttcgaatcgta
ctcaagactgatcctataggctcagaaagcgtgttcttacgatgctggcatcgagatgct
aagaaattgtatgacttgactcatgatctcaaactggttttctgggggcttagtgatccc
aattttcagctttcggataaggaaaaggaaatacagttgatgcttccatttactcctcag
agatgtcagagagttagagaccaatacgttaaaattccatccgagaactttaacgatggg
ccgttttttattgaagagaagttcgatggagagcgtattcaagttcatattaagcgggta
gatggagagagatttcagttcaagtattacaccaggaatgcgatggactacacatcaatt
tacggcgagttttcgacgtctttaagaggttgtttgtcaccatttctaggtcctgaaaat
tttgacttacatatgcacagttgcatattggatggagaaatgatatgctatgatccaata
ttaaaagttccacttccctactctgtgcttaagacgtctgcactacactctctttcagct
aaacctggaagtaaaaatcctcatcctatgtttgtagcctttgactgtgtctttgtgaat
ggcgagtcgcttgagaagtatccacttgagcgccgaaagaaggttttgagttatgtgttg
aagaaacctattgcaaatttatttgtggcggctgattttattgttgctcggactggtgat
gagatcgagaaagccatggacagagcgattggcatggattcagaaggtttagttctcaaa
agcatacaatccaaatacgacataggagccactacgaagcaatggatcaaaatcaaaccg
gaatatttggaagagttcggtgagaatttggatttggtagtggttggaaagattcctggc
attaagagttcctttttatgtggtctaagggacgataatgattcaggctgtaaatttatg
acattgtgcaaaatatccaacgggttttctcaagatgattatagacacattgatagggta
acggcaggaaagtggaaggacatcaacatggatccgcctaacgataatttagtaaagttc
gggaagactttgcctgttgtttggatagacccaagagattcagtagtaattgaagcaaga
gcaaggtccatcactaggcagccagagcaggaattttacgctaccgataccacgctatac
aacgctttttgtgtgaagatacgtaccgataaagactggaaaactgcaagtaccttgaaa
gaatatgaacagtcttcaaatcagtcgaaactctacaatgctcagaatgttattgggaat
gagtctaaaaagagaaggatagggtatccaagcaagaagataacaatgcttcaaaaattg
aatgaagagtacgaggtaggcggtttggcacctaagagcaacctatttgagagttacatt
tttagtattagaacagattgcatctatctgggaaagctggtaagaataagagagcttaac
cagattgttagtgataatgggggagctttagcacgtaatcctgaatcggtcgtgctagat
actgataagcacgagaggctaatggttatagcggagaaaatgactattgaggtgaaagat
ctcagcaataagtataacgtgtttcggttcaagtggtgcgaagattgcctagcagtaaag
gaattgatagagccagatttgacacatatactagttgctgaaccgagcttggaagaagat
tgccgtaagagacttgataaatttggaaataacttggtaactcctttgactgagtataca
ttatggaaaatggtgccatccgaggagagaaatgaagtgaacttgagccaagaggaattg
aatcggtatcacagtttcttcgttttctacaaaatgaagtttaaggtgatattctccgca
gaaaatgcgagaattggttcaattgttgcacaagaaattgaaatcaacggcggaaaggtg
tgcgagagcttggaagaagcgtcaatgattgtggtagtactcttcaaagtggataagcag
aatagtttcgaatcatactctagcacaacagctatagtacaacgaactatgaggcaaaga
aatgaactacgaaagctttgcaaaagaataccaagagttgtttcacacagctacattcgt
gcttgtacaactagcagctcacttgtagatcctgctgaatataaacgcgctcagttcgcg
gacctcgaggcttgcgagcaaatagaaaagctaggaaaggatggatgtcttgtcatccca
cctattatcaaggcttcagtggtggacgatactgacgtgcctggaaatgtgtcgacgttg
aagatagcgaggaacgagaagtatgccattgaatttaccaaagatgaacctgttatggag
acattgggcaatccaaaatcgacattatcacttacaattcctccatctgttcccgtttat
gtgaagagagggtctctcatatctatattcatggctgattctggtgctaatctagatacc
gcggtaacaagcaccttgagaatcaaccaacctattaggaggtttctttatgggggattc
acatctacatatcaaaggttgttatctacggtatcattgaatttgatgatctccgcatat
tccaaaggaggtcccttatcttctttcatgttcagtactaaggctcagtcgaccaagact
ttctgtaatattgctatggatggaacgatggattgggctttgcttgatcccaagtctttg
cacgtgtatacgggtaacaatctgttggtcacaagtcagatgcttcccaaaaagacaaat
gggaagaagaagttagacaccgggttatatagtcttttccagtcgggttatacgctattg
actggaagaggatacgtttccttggttggatctggatctatcttcaagcttggattggct
cgagatgaggagatctacatcaagcaggctaatttgttggccacgacgataaaagatgtc
agtgagctttcttcgggatatttcattggcaagaatatagacaataagacttttgcgaaa
tctgtgaaggtcaaagccaagaaggaggtgggattgggggaattggaaactacaaagagt
cgcttgtcgtggtttggtgcattcaaatccatgttagttaaagttttgtccattctagct
tctagccaagcaagagtgagcaaattggttgcttttaatgggagatatatcaaagttaaa
ggtccaaggacgcttttgatacagaccagctcgggattggacaaatttgtgtataacagt
acattactagggagatctaaatttcgaggaagtattactgacgtggaaaagtttatcagg
aataagcaacagctcagtaagccagagactgagattcacaaataa

DBGET integrated database retrieval system