Brettanomyces nanus: FOA43_000983
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Entry
FOA43_000983 CDS
T07002
Name
(RefSeq) uncharacterized protein
KO
K11600
exosome complex component RRP41
Organism
bnn
Brettanomyces nanus
Pathway
bnn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bnn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FOA43_000983
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bnn03019
]
FOA43_000983
Messenger RNA biogenesis [BR:
bnn03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
FOA43_000983
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
FOA43_000983
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
62194384
NCBI-ProteinID:
XP_038777235
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All DBs
Position
1:2142714..2143454
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AA seq
246 aa
AA seq
DB search
MSRFELYSPEGIRIDGRRWNELRQFHCQTNTHPNASDGSSYVRQGNSEVICLVKGPMDTT
YGSSSTKQLPDSPVLSISINHPAFATMERKKRPRNDKRLTELSIILKRCFLKTIVLHNFA
RSLIEVTVTVLSFDGGLLATCCNAITLALIDAGISLYDYVSAVTVGLYDQTALLDLNSLE
EIDLSFITIGVVGDSDKLNLILCEDRLPLDKLERLISLGIEGCHRLKGLMNDTVRQVGAD
LLSKKQ
NT seq
741 nt
NT seq
+upstream
nt +downstream
nt
atgagcagattcgaactatattctccggaaggaatccgaattgatggtcgtcgttggaat
gagcttcgacagttccattgccaaacaaatacacatcctaatgcatccgatgggtccagt
tatgtgaggcagggtaactccgaggtgatatgtctagtcaaaggacctatggatactacg
tacggatcatcatcaactaaacagttaccggattcacctgttttaagtatatccattaat
catccggcttttgccactatggagagaaagaaaagacctagaaacgataaacggttgact
gaattaagtatcatattgaagagatgctttctcaagaccatcgtactacataattttgcc
cgatcccttatagaggttacggtgactgttttgtcctttgatggtggattgttggcaact
tgttgtaatgctataaccttggctcttatagatgcaggtatttcattatatgactacgtg
agtgcagtgaccgttggactttacgatcagactgcattgctcgatctaaactctcttgaa
gagatagacttgagctttattacaataggtgtagttggagatagcgataaattgaatctt
atcttatgcgaggatagactcccgttggataaactagagagattgattagcttgggtata
gaaggatgccaccgactgaaaggattgatgaacgataccgttagacaggttggagcagat
ttactaagcaagaaacagtaa
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