Brettanomyces nanus: FOA43_001478
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Entry
FOA43_001478 CDS
T07002
Name
(RefSeq) uncharacterized protein
KO
K12613
mRNA-decapping enzyme subunit 2 [EC:
3.6.1.62
]
Organism
bnn
Brettanomyces nanus
Pathway
bnn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bnn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FOA43_001478
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bnn03019
]
FOA43_001478
Enzymes [BR:
bnn01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.1 In phosphorus-containing anhydrides
3.6.1.62 5'-(N7-methylguanosine 5'-triphospho)-[mRNA] hydrolase
FOA43_001478
Messenger RNA biogenesis [BR:
bnn03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
FOA43_001478
mRNA degradation factors
5'-3' decay
Decapping complex
FOA43_001478
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EVE
DCP2
NUDIX
Motif
Other DBs
NCBI-GeneID:
62194879
NCBI-ProteinID:
XP_038777719
LinkDB
All DBs
Position
1:join(3164634..3167027,3167279..3167760,3167903..3167918)
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AA seq
963 aa
AA seq
DB search
MSIHLREGFSNETLERVLEDLAVRFVVNCPNEDLSSIERVLFLIEEAQWFYQDFARAMNP
LLPPLNMKKFTTKLLERCPLIWKWGNPRDALLQFGKYKSLIPVRGCALFTPRMDKMLLVQ
GIESPSWAFPRGKISKDETDVECAVRELKEETGYDASSLIDEDEYVERTIRAKNYKIFFI
RGIPEETVFKPVARNEIRDIKWWEVKSLLNKKNRDNKKFFLVPNMIKPITAFIHRVKGTD
TDEELKIKATAQLKKILGIGEAIEPQQETDPGRALLTMLQNASKNAQSAAPDTTTNAQTS
FSAPYPTAASISPLPAGLLSQLPQLPIAAGYPPMQPMATMGPTPFQFHLPYFNPFFPQSM
ALPPQFPLPPFLQPFPVTPSAPISGPTTASASASADQQPAYQPQTSQAPAASSFAKPTIR
SQESNSKVLLALLKAPDTTESQEPPKIPDSHPENYVKRTKNEIANPSFLRNLFPKRTNSP
ETVSSSKKIQILKRPNSTPSSIDVTTPANSPNTGSSFQNSAQSMLDKPVKLLRREHKPSS
KGTAQLLGILNGTKARGKIVPPMNSNPDPQHLNVIKHTSSHRSASPLPKVINEKPETENN
EDPSAYLLGILNKPKSSEAAPPPAFVAAVPSNGAELLSIINNPHQSTDLPKEAQQDQQEQ
RTQRPLKPIAHSNGKSLLEILQKPNTPIAKSSTPAQSGAAASLLSVLKRGSQTADKTKPQ
SASETETQIRPESAPVETNSESQNLLKMLKRPQTHPIIETLQNDAEDVAEFSDFEDFDDL
DDGLEVNNFLHNKQIKTYKANGTPSSCSPIIPKKPPVFDKDAKGRRYWLIKTEPVNRKDP
KSGKDVKFSIEDLAKVDAEPWTGVRNYEARNNLLNMAKGDICLVYHSNCKNPGIVGIAIV
ASKQAKPDLLQFDTSSGYFDAKSTKENPRWWCPDISFAGILRRKVSLSELKLNPLFTEIT
SKR
NT seq
2892 nt
NT seq
+upstream
nt +downstream
nt
atgtccatacatcttcgagaaggtttctcaaacgaaacactagagcgtgtattagaggac
ttggctgtgagattcgttgtcaattgtcccaacgaagacctttccagtattgaaagagta
ctcttcctaatagaggaggctcaatggttttatcaggactttgcccgggcaatgaatcca
ttacttccaccactaaatatgaagaaatttactacaaagcttttagaaagatgccctctc
atctggaaatgggggaatccaagagatgcgcttctacaatttggtaaatataagagtctt
attccagttcgtggatgcgctttatttacaccacggatggacaagatgctacttgttcaa
ggaatagaatcaccatcgtgggcattccctcgtggaaagatcagtaaggatgaaactgat
gttgagtgtgccgtcagagagttgaaggaagagactggatacgatgcctcttctctaatt
gatgaggacgagtacgtggagagaaccataagagccaaaaattataagatattctttatt
cgtggcattcctgaagagacagtgtttaaacctgttgccagaaatgagatccgggatatt
aaatggtgggaggtaaagtcactattgaacaagaagaacagagacaacaaaaaattcttc
cttgttccaaatatgatcaagccaatcacagcatttatccaccgtgttaagggtaccgac
actgacgaggagttgaagatcaaggctaccgctcaactgaagaagattttaggtattggc
gaagcgatcgaacctcagcaggaaacggatcctggaagagcattgcttacgatgcttcaa
aacgccagcaagaatgctcaaagtgctgcaccagatactactaccaacgcacaaacaagt
ttttctgctccatatcctacggcagcttctatctctccgcttcccgctggtttactttcg
caactaccccagctaccaattgcagccggatatcctccaatgcaacccatggctaccatg
gggcctactcctttccagtttcatttgccatatttcaatccttttttcccccagagtatg
gccctacctccacaattcccactgccaccttttctccagcctttcccagtcacaccttca
gctcctatatccggacctacaaccgcatccgcatcagcatcagcagaccaacagccagca
tatcaaccacagacttctcaggcccctgccgcttcctcctttgccaagcctacaattagg
tcccaggaatcgaacagtaaagtgttacttgccctacttaaggcacctgatactactgag
tctcaagaacctccaaaaattcccgattcacaccctgagaattacgtgaagaggactaaa
aatgagattgcaaatccttccttcctcaggaatctgtttccgaagcgtaccaattctccc
gaaacagtttcttcatccaagaaaatacagattcttaaacgtccgaattcgaccccttcg
tcaattgatgtgacaacaccagctaattctccaaacacaggttcctcgttccaaaattcg
gcgcagtcaatgctcgacaagcctgtaaaattacttagaagggaacataagccttcaagt
aaaggtactgcccagctattaggcattctaaatggaaccaaagcccgtggtaaaatcgta
ccacctatgaactctaatcctgatcctcagcatttaaacgttataaagcatacatcttct
catcgctctgcttctcctttacctaaggtgattaacgagaagccagagacggagaacaac
gaggatccatcggcttacttgcttggtatactaaacaagcctaaatcatctgaagctgct
cctcctcctgctttcgtagcggctgttccttccaacggcgctgaactccttagtattatc
aacaatcctcatcagtccacagatttaccaaaagaagcacagcaagatcagcaagagcag
cgaacacaaagaccattgaaaccaattgcacactctaatggtaaatccttgctagaaatt
cttcaaaaacctaacactcctatagccaagagttctacaccggcacagtctggtgccgca
gcctctttactcagcgttttaaagagaggtagtcagacagcagataagacaaaacctcaa
tcggcctctgagacagaaactcagataagaccggaatcggctcccgtggagacaaattca
gagagccagaaccttctcaagatgttgaagcgcccacaaactcatcctattattgagact
cttcaaaatgatgctgaagatgtggctgagttctctgacttcgaagactttgacgatttg
gacgacggtttagaagtgaacaacttcttgcacaataagcagatcaaaacgtataaggca
aatggaacaccatcatcgtgctctcctattatccccaaaaaacctcctgtgtttgacaag
gatgctaaaggtagacgctactggcttataaagacagaacccgtgaatcgaaaagatccg
aaatcgggtaaagacgtgaaattctccattgaagatcttgccaaagtcgacgcagaacca
tggacaggtgtaaggaattacgaggctagaaacaaccttcttaatatggcaaaaggagat
atttgtctagtataccattccaactgcaagaaccctggtattgtaggtattgcgattgtg
gccagcaagcaagcaaagcctgatctattacaattcgataccagctccgggtactttgat
gccaagtccaccaaggagaatccccggtggtggtgtccggacatttcatttgctggaatt
ctaaggagaaaagtaagcctttctgaattgaagctaaatccgttatttacggagatcaca
tcgaagagatag
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