Bactrocera oleae (olive fruit fly): 106618593
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Entry
106618593 CDS
T07646
Name
(RefSeq) pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16 isoform X1
KO
K12815
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX38/PRP16 [EC:
5.6.2.6
]
Organism
bod
Bactrocera oleae (olive fruit fly)
Pathway
bod03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bod00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
106618593
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bod03041
]
106618593
Enzymes [BR:
bod01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
106618593
Spliceosome [BR:
bod03041
]
Complex C
Other components
Step II factors
106618593
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_C
HA2_N
DEAD
AAA_22
AAA_19
nSTAND3
T2SSE
AAA_7
AAA_14
AAA_16
Sigma54_activat
ATPase
ABC_tran
AAA_23
Motif
Other DBs
NCBI-GeneID:
106618593
NCBI-ProteinID:
XP_036224851
LinkDB
All DBs
Position
Unknown
AA seq
1260 aa
AA seq
DB search
MDDDDVGVHRLEGSTGNVRGGLVIKKLKEEGGDTKFKVPKPSILGLDRLAAQRRKERDDA
QRLISFKDNENDEDDHKGGVSATSAGDEFAFKKPDTNNLHKIPRQLREPKVETPSHTGGV
SDEARERLREHVKRDRERTTKGGMRYSTSDDSKRNNRDRSSSSSSSRDRDRDRVRRRDRD
RPREYERDRNRGRYQDKDRNRDKERRDRSRDNSERGNRGDAFSARSEEHTPRFKDEPRTP
MDVSVSGSAWDDDDNDRPSQTKKSSWDFPTPKSYASSERSDWSVRSSSSSGIGTSSSRGR
SRQEREDDTPRPTPAHNYNVWANDRKRSGATPATGRSNRQPWGESEEDRDMWEEEQRRLD
REWYNIDEGYDDENNPFSGANADYFRKREEIIEQKRTKRISAQQRQINKDNELWERNRML
TSGVVMSINVNEDFDEEALERVHLLVHHIIPPFLDGRIVFTKQPEPVIPVKDPTSDMALI
ARKGSNLVRVYREQKERRKAQKKHWELGGTKLGNIMGIEKKVDEEDAKFDKDTDTADYRR
DQKFAEHMRDQDSGGKSDFARKKTISEQRRFLPVFAVRQELLNVIRENSVVIIVGETGSG
KTTQLTQYLHEDGYSNFGMIGCTQPRRVAAMSVAKRVSDEMGTKLGDEVGYAIRFEDCTS
EKTVIKYMTDGILLRESLRDPDLDGYSAIIMDEAHERSLSTDVLFGLLREIVARRHDLKL
IVTSATMDSTKFATFFGNVPNFTIPGRTFPVDVMFSKNTCEDYVESAVKQALQVHLTPNE
GDMLIFMPGQEDIEVTCEVLAERLVEIDNAPELSILPIYSQLPSDLQAKIFQKSPEGLRK
CVVATNIAETSLTVDGIIYVIDAGYCKLKVYNPRIGMDALQIYPISQANANQRSGRAGRT
GPGQAFRLYTQRQYKEDLLPLTVPEIQRTNLANTVLLLKSLGVVDLLQFHFMDPPPQDNI
LNSLYQLWILGALDHTGALTPLGRQMAEFPLDPPQCQMLIVSCQMECSAEVLIIVSMLSV
PSIFYRPKGREEEADGVREKFQVPESDHLTYLNVYLQWKQNNYNSSWCNEHFIHVKAMRK
VREVRQQLKDIMIQQKLNVKSCGTDWDIVRKCICSAYFYQAARLKGIGEYVNLRTGMPCH
LHPTSALYGLGTTPDYVVYHELVMTAKEYMQCATAVDGYWLAELGPMFFSVKETGRSGRE
KKKQAAEHLKEMETQMQLAQEQMEERKLQAAQREEQMTPKQEIITPGDATPRRTPARIGL
NT seq
3783 nt
NT seq
+upstream
nt +downstream
nt
atggatgatgacgatgtcggtgtgcaccgccttgaaggctccaccggtaacgttcgtgga
ggacttgtaattaaaaaactaaaagaggagggtggtgatactaaattcaaagtgcccaaa
ccgtccatactaggtttagatcgtttagcagcgcaacgtcgtaaagagcgagatgatgca
caacgattgatatcctttaaggataatgaaaatgatgaagatgaccacaaaggtggggta
tctgctacatccgctggtgatgaatttgctttcaaaaagcctgacaccaataatctacat
aagataccaaggcagttaagggaaccaaaagtggagacaccttcacataccggtggtgtg
tctgacgaggcgcgagaacgtttacgtgagcatgttaaacgggatagagagcgcactact
aaaggaggaatgcgttattccacaagtgacgacagtaaacgaaacaacagagatcgttca
tcttcaagttcttcaagtcgtgatagagatcgcgatagagttcgtcgtcgcgatagagat
agaccaagagagtatgagcgtgatcgcaaccgtggcagatatcaggataaagacagaaat
agagacaaagaacgtcgagatcgtagcagagataattcagaacgtggtaatcgtggagat
gcattttcggctcgtagcgaggagcacacaccgcgttttaaggatgagccacgcacacct
atggacgtgtccgtgagtggtagtgcctgggatgacgacgacaatgatcgaccttcacag
acaaaaaaatcttcttgggattttccaacgcccaagtcgtatgccagttcagaacgctcc
gactggtctgttagaagtagcagtagcagtggcattggcactagcagttctcgtggtcgg
tctcgtcaagaacgagaagatgatacgccaagaccgacacctgcccacaactacaatgtt
tgggcaaatgaccgcaagcgctctggtgctacacccgcaactggacggagtaatcggcaa
ccatggggtgaaagtgaagaagatcgagacatgtgggaagaagagcaacgccgcctagat
cgtgaatggtataacattgatgaaggttacgatgatgaaaataatccattctcaggtgcc
aatgcagactactttagaaaacgtgaagaaataattgaacaaaagcgtacgaaacgtatt
agcgcacaacagcgccaaattaacaaggataatgaattatgggagcgcaaccgtatgctt
acgtcaggcgtagtaatgtccataaatgtaaatgaagatttcgatgaggaggcactagag
cgtgtccatttgttggtgcatcatatcattccaccgttccttgatggacgtatcgtattc
accaagcagcccgaacccgttatacccgttaaagatccaacctctgacatggctttaatt
gcacgtaagggcagcaacttggtacgtgtttaccgcgaacaaaaggaacgccgaaaggcg
caaaagaaacactgggagttgggcggtaccaaattgggtaacataatgggtatcgagaag
aaggtcgatgaggaggatgcaaagttcgataaggacacagatacggcagactatagacgt
gatcaaaaattcgccgaacacatgcgtgaccaagattctggtggtaaaagtgatttcgca
cgcaaaaagacaatatctgagcagcgtagatttttacccgtatttgctgtacgccaagag
ctgctgaatgtaattcgggaaaactcggttgtaattattgtgggtgaaacgggtagcggc
aaaactacacaattgacacagtatttgcatgaagacggttatagcaactttggcatgata
ggttgcacgcagccgcgtcgtgttgcagccatgtctgtggcgaaacgtgtctcagacgaa
atgggcaccaagttgggtgatgaagtgggttatgctatacgttttgaagattgcacttct
gagaaaactgttatcaaatatatgaccgacggtatcttattgcgtgaaagcttacgtgat
ccggatttggatggttactctgctattattatggatgaagcgcatgaacgttctctctcc
acggatgtgctcttcggtttgttacgtgagatcgttgcccgacgtcatgatctcaagctc
atcgtcacttctgccactatggattccacaaaattcgccacattctttggtaatgtaccg
aactttaccatacccggacgtactttccccgtcgatgtgatgttcagtaaaaatacttgc
gaggactatgtcgaatcggcggtcaaacaagcactacaagtccatcttacacccaacgag
ggtgatatgctaatattcatgcccggtcaagaggatattgaagtcacttgtgaagtgttg
gccgagcgtttggtggaaatcgacaatgcacctgaactatccatactaccaatctactca
cagttaccctcggatttgcaagcgaaaatatttcaaaaatcacccgaaggcttacgcaaa
tgtgtggtcgctacaaatatagcggagacctcacttaccgtcgacggtattatctatgtc
atcgatgccggttattgtaaactaaaagtctataatccgcgtatcggtatggatgcactg
cagatttatcccatatcacaagcaaatgccaatcaacgttcgggtcgtgccggtcgtacc
gggcccggacaggcgttccgtctctacacacaacgacaatacaaagaggatctactgccg
ctgactgtgcccgaaatacaacgtaccaatttggcgaatacggtgctgttgctgaaatcg
ttgggcgttgtggatctgctgcagtttcattttatggatcctccaccacaagataacata
ctcaattcgctgtatcagctgtggatactcggcgctttggaccacactggcgcattgaca
ccgctcggtcggcaaatggctgaatttccactcgatccgccgcaatgtcaaatgttgatc
gtctcctgtcaaatggagtgcagcgctgaggtgctcatcatagtatccatgctctccgtg
ccctccattttttaccgccccaagggacgcgaggaagaagctgatggtgttcgagagaaa
ttccaagtgccggagtcggaccatctcacctacctcaatgtgtacctgcagtggaagcag
aataattacaactccagctggtgcaatgagcacttcatacacgtcaaggcaatgcgtaaa
gtacgtgaagtccgccaacagctcaaggacattatgatacagcagaaactcaatgtgaaa
tcctgcggtaccgattgggacattgtgcgcaagtgcatttgctcggcatatttctaccaa
gcagcgcgtctcaaaggtattggcgagtatgtcaatttgcgtaccggcatgccgtgccat
ctgcatcccacctccgcgctctatggtctcggcaccactcccgattatgtggtttatcat
gagctcgtaatgaccgccaaagagtatatgcaatgtgccacagctgtcgacggctattgg
ttggccgaactgggtcctatgttcttctctgtaaaggagaccggtcgcagcggacgtgag
aagaagaaacaggctgcggagcatctgaaagaaatggagacgcagatgcagttggcgcaa
gagcagatggaggagcgtaaattgcaggcggcccaacgtgaggagcaaatgacaccgaag
caggagatcataacacccggtgatgccacgcccagacgtacgccggcgcgcattggcttg
taa
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