Bactrocera oleae (olive fruit fly): 106618593
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Entry
106618593 CDS
T07646
Symbol
Prp16
Name
(RefSeq) pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16 isoform X1
KO
K12815
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX38/PRP16 [EC:
5.6.2.6
]
Organism
bod
Bactrocera oleae (olive fruit fly)
Pathway
bod03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bod00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
106618593 (Prp16)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bod03041
]
106618593 (Prp16)
Enzymes [BR:
bod01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
106618593 (Prp16)
Spliceosome [BR:
bod03041
]
Complex C
Other components
Step II factors
106618593 (Prp16)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_C
WHD_HA2
DEAD
AAA_22
AAA_19
nSTAND3
nSTAND_NTPase5
T2SSE
Sigma54_activ_2
AAA_14
AAA_7
AAA_16
ABC_tran
PhoH
Sigma54_activat
ATPase
AAA_23
Motif
Other DBs
NCBI-GeneID:
106618593
NCBI-ProteinID:
XP_036224851
LinkDB
All DBs
Position
5:complement(64921147..64961284)
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AA seq
1257 aa
AA seq
DB search
MDDDDVGVHRLEGSTGNVRGGLVIKKLKEEGGDTKFKVPKPSILGLDRLAAQRRKERDDA
QRLISFKDNENDEDDHKGGVSATSAGDEFAFKKPDTNNLHKIPRQLREPKVETPSHTGGV
SDEARERLREHVKRDRERTTKGGMRYSTSDDSKRNNRDRSSSSRDRDRDRVRRRDRDRPR
EYERDRNRGRYQDKDRNRDKERRDRSRDNSERGNRGDAFSARSEEHTPRFKDEPRTPMDV
SVSGSAWDDDDNDRPSQTKKSSWDFPTPKSYASSERSDWSVRSSSSSGIGTSSSRGRSRQ
EREDDTPRPTPAHNYNVWANDRKRSGATPATGRSNRQPWGESEEDRDMWEEEQRRLDREW
YNIDEGYDDENNPFSGANADYFRKREEIIEQKRTKRISAQQRQINKDNELWERNRMLTSG
VVMSINVNEDFDEEALERVHLLVHHIIPPFLDGRIVFTKQPEPVIPVKDPTSDMALIARK
GSNLVRVYREQKERRKAQKKHWELGGTKLGNIMGIEKKVDEEDAKFDKDTDTADYRRDQK
FAEHMRDQDSGGKSDFARKKTISEQRRFLPVFAVRQELLNVIRENSVVIIVGETGSGKTT
QLTQYLHEDGYSNFGMIGCTQPRRVAAMSVAKRVSDEMGTKLGDEVGYAIRFEDCTSEKT
VIKYMTDGILLRESLRDPDLDGYSAIIMDEAHERSLSTDVLFGLLREIVARRHDLKLIVT
SATMDSTKFATFFGNVPNFTIPGRTFPVDVMFSKNTCEDYVESAVKQALQVHLTPNEGDM
LIFMPGQEDIEVTCEVLAERLVEIDNAPELSILPIYSQLPSDLQAKIFQKSPEGLRKCVV
ATNIAETSLTVDGIIYVIDAGYCKLKVYNPRIGMDALQIYPISQANANQRSGRAGRTGPG
QAFRLYTQRQYKEDLLPLTVPEIQRTNLANTVLLLKSLGVVDLLQFHFMDPPPQDNILNS
LYQLWILGALDHTGALTPLGRQMAEFPLDPPQCQMLIVSCQMECSAEVLIIVSMLSVPSI
FYRPKGREEEADGVREKFQVPESDHLTYLNVYLQWKQNNYNSSWCNEHFIHVKAMRKVRE
VRQQLKDIMIQQKLNVKSCGTDWDIVRKCICSAYFYQAARLKGIGEYVNLRTGMPCHLHP
TSALYGLGTTPDYVVYHELVMTAKEYMQCATAVDGYWLAELGPMFFSVKETGRSGREKKK
QAAEHLKEMETQMQLAQEQMEERKLQAAQREEQMTPKQEIITPGDATPRRTPARIGL
NT seq
3774 nt
NT seq
+upstream
nt +downstream
nt
atggatgatgacgatgtcggtgtgcaccgccttgaaggctccaccggtaacgttcgtgga
ggacttgtaattaaaaaactaaaagaggagggtggtgatactaaattcaaagtgcccaaa
ccgtccatactaggtttagatcgtttagcagcgcaacgtcgtaaagagcgagatgatgca
caacgattgatatcctttaaggataatgaaaatgatgaagatgaccacaaaggtggggta
tctgctacatccgctggtgatgaatttgctttcaaaaagcctgacaccaataatctacat
aagataccaaggcagttaagggaaccaaaagtggagacaccttcacataccggtggtgtg
tctgacgaggcgcgagaacgtttacgtgagcatgttaaacgggatagagagcgcactact
aaaggaggaatgcgttattccacaagtgacgacagtaaacgaaacaacagagatcgttca
tcttcaagtcgtgatcgagatcgcgatagagttcgtcgtcgcgatagagatagaccaaga
gagtatgagcgtgatcgcaaccgtggcagatatcaggataaagacagaaatagagacaaa
gaacgtcgagatcgtagcagagataattcagaacgtggtaatcgtggagatgcattttcg
gctcgtagcgaggagcacacaccgcgttttaaggatgagccacgcacacctatggacgtg
tccgtgagtggtagtgcctgggatgacgacgacaatgatcgaccttcacagacaaaaaaa
tcttcttgggattttccaacgcccaagtcgtatgccagttcagaacgctccgactggtct
gttagaagtagcagtagcagtggcattggcactagcagttctcgtggtcgttctcgtcaa
gaacgagaagatgatacgccaagaccgacacctgcccacaactacaatgtttgggcaaat
gaccgcaagcgctctggtgctacacccgcaactggacggagtaatcggcaaccatggggt
gaaagtgaagaagatcgagacatgtgggaagaagagcaacgccgcctagatcgtgaatgg
tataacattgatgaaggttacgatgatgaaaataatccattctcaggtgccaatgcagac
tactttagaaaacgtgaagaaataattgaacaaaagcgtacgaaacgtattagcgcacaa
cagcgccaaattaacaaggataatgaattatgggagcgcaaccgtatgcttacgtcaggc
gtagtaatgtccataaatgtaaatgaagatttcgatgaggaggcactagagcgtgtccat
ttgttggtgcatcatatcattccaccgttccttgatggacgaatcgtattcaccaagcag
ccagaacccgttatacccgtcaaagatccaacctctgacatggctttaattgcacgtaaa
ggcagcaacttggtacgtgtttaccgcgaacaaaaggaacgccgaaaggcgcaaaagaaa
cactgggagttgggcggtaccaaattgggtaacataatgggtattgagaaaaaggtcgat
gaggaggatgccaagttcgataaggacacagatacggcagactatagacgtgatcaaaaa
ttcgccgaacacatgcgtgaccaagattctggtggtaaaagtgatttcgcacgcaaaaag
acaatatctgagcagcgtagatttttacccgtatttgctgtacgccaagagctgctgaat
gtaattcgggaaaactcggttgtaattattgtgggtgaaacgggtagcggcaaaactaca
caattgacacagtatttgcacgaagacggttatagcaactttggcatgataggttgcacg
cagccgcgtcgtgttgcagccatgtctgtggcgaagcgtgtctcagacgaaatgggcacc
aagttgggtgatgaagtgggttatgctatacgttttgaagattgcacttctgagaaaact
gttatcaaatatatgaccgacggtatcttattgcgtgaaagcttacgtgatccggatttg
gatggttactctgctattattatggatgaagcgcatgaacgttctctctccacggatgtg
ctcttcggtttgttacgtgagatcgttgcccgacgtcatgatctcaagctaatcgtcact
tctgccactatggattccacaaaattcgccacattctttggtaatgtaccgaactttacc
atacccggacgtactttccccgtcgatgtgatgttcagtaaaaatacttgcgaggactat
gtcgaatcggcggtcaaacaagcactacaagtccatcttacacccaacgagggcgatatg
ctaatattcatgcccggtcaagaggatattgaagtcacttgtgaagtgttggccgagcgt
ttggtggaaatcgacaatgcacctgaactatccatactaccaatctactcacagttaccc
tcggatttgcaagcgaaaatatttcaaaaatcacctgaaggcttacgcaaatgtgtggtc
gctacaaatatagcagagacctcacttaccgtcgacggtattatctatgtcatcgatgcc
ggttattgtaaactaaaagtctataatccgcgtatcggtatggatgcactgcagatttat
cccatatcacaagcaaatgccaatcaacgttcgggtcgtgccggtcgtaccgggcccgga
caggcgttccgtctctacacacaacgacaatacaaagaggatctactgccgctgactgtg
cccgaaatacaacgtaccaatttggcgaatacggtgctgttgctgaaatcgttgggcgtt
gtggatctgctgcagtttcattttatggatcctccaccacaagataacatactcaattcg
ctgtatcagctgtggatactcggcgctttggaccacactggcgcattgacaccgctcggt
cggcaaatggctgaatttccactcgatccgccgcaatgtcaaatgttgatcgtctcctgt
caaatggagtgcagcgctgaggtgctcatcatagtatccatgctctccgtgccctctatt
ttttaccgccccaaaggacgcgaggaagaagctgatggtgttcgagagaaattccaagtg
ccggagtcggaccatctcacctacctcaatgtgtacctgcagtggaagcagaataattac
aactccagctggtgcaatgagcacttcatacacgtcaaggcaatgcgtaaagtacgtgaa
gttcgccaacagctcaaggacattatgatacagcagaaactcaatgtgaaatcctgcggc
accgattgggacattgtgcgcaagtgcatttgttcggcatatttctaccaagcagcgcgt
ctcaaaggtattggcgagtatgtcaatttgcgtaccggcatgccgtgccatctgcatcct
acctccgcgctctatggtctcggcaccactcccgattatgtggtttatcatgagctcgta
atgaccgccaaagagtatatgcaatgtgccacagctgtcgacggctattggttggccgaa
ctgggtcctatgttcttctctgtaaaggagaccggtcgcagcggacgtgagaagaagaaa
caggctgcggagcatctgaaagaaatggagacacagatgcagttggcgcaagagcagatg
gaggagcgtaaattgcaggcggcccaacgtgaggagcaaatgacaccgaagcaggagatc
ataacacccggtgatgccacgcccagacgtacgccggcgcgcattggcttgtaa
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integrated database retrieval system
