Brassica oleracea (wild cabbage): 106294666
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Entry
106294666 CDS
T04124
Name
(RefSeq) ABC transporter B family member 13
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
boe
Brassica oleracea (wild cabbage)
Pathway
boe02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
106294666
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
boe02000
]
106294666
04147 Exosome [BR:
boe04147
]
106294666
04090 CD molecules [BR:
boe04090
]
106294666
Enzymes [BR:
boe01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
106294666
Transporters [BR:
boe02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
106294666
Exosome [BR:
boe04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
106294666
CD molecules [BR:
boe04090
]
Proteins
106294666
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_16
AAA_29
AAA_22
ABC_ATPase
AAA_30
AAA_21
Zeta_toxin
AAA
RsgA_GTPase
AAA_23
nSTAND1
P-loop_TraG
AAA_24
DEAD
AAA_19
APS_kinase
DUF87
Motif
Other DBs
NCBI-GeneID:
106294666
NCBI-ProteinID:
XP_013585733
LinkDB
All DBs
Position
C5:complement(17524085..17528874)
Genome browser
AA seq
1239 aa
AA seq
DB search
MDSTEPSSNGNIQNEKDSKKKDYVSLMGLFGAADKLDCFLMILGGLGACTLGATLPLFFV
FFGKMLDSIGNLSTDPKALSSRVSKNALDLVYLGLVTFLSAWIGVACWTQTGERQTARLR
INYLKAILAKDITFFDTEARDSNLIFHISSDAILVQDAIGDKTGHVLRYLSQFVAGFVVG
FLSVWQLTLLTLAVVPLIAIAGGGYAIIMSTVSEKSEAAYADAGKVAEEVISQVRTVYAF
VGEEKAVNSYSNSLKKALKLCKRSGLAKGLGVGLTYSLLFCAWALLLWYASLLVRHGKTN
GAKAFTTILNVIFSGFALGQAAPSISAISKGRVAAANIFRMIENKNLEGSERLEDGTTLQ
NVAGNIEFHQVSFAYPSRPNMVFENLSFTIPSGMTFAFVGPSGSGKSTIISMVQRFYEPN
SGEILLDGNDIKRLKLSWLREQMGLVSQEPALFATTIASNILLGKENANMDQIIEAAKAA
NADSFIKSLPNGYNTQVGEGGTQLSGGQKQRIAIARAVLRNPKILLLDEATSALDAESEK
IVQQALDNVMEKRTTLVVAHRLSTIRNVDKIVVLRNGQVVETGSHSDLLSRGGDYASLVN
VQETEPQENPRSIMSETGKSQAGSSSSRRASSSRRTSSFREVQEKTDKDSNGEDLSSSST
IWELIKLNAPEWPYALLGSIGAVLAGAQTPLFSMGIAYVLAAFYSPSPSVIKRDVEKVAI
VFVGVAVVTAPIYLLQHYFYTLMGERLTSRVRLSLFSAILSNEIGWFDLDENNTGSLTSI
LAADATLVRSALADRLSTIVQNLSLTVTALAIAFYYSWRVAAVVTSCFPLLIAAALTEQL
FLKGFGGDYTRAYSRATSVAREAIENIRTVASFGAEKQISEQFACELSKPTKSAFLRGHI
SGIGYGFSQFLAFCSYALGLWYVSVLIKHKETNFSDSIKAFMVLIVTAFSVAETLALTPD
IVKGTQALGSVFRVLHRETEIPPNHPNSRLVTQIKGDIEFRNVSFAYPARLDIPIFQNLN
LRVSAGKSLAVVGPSGSGKSTVIGLIMRFYDADKGNLCIDGKDIKTLNLRSLRKKLALVQ
QEPALFSTTIHENIKYGNENASEAEIIEAAKAANAHEFIGRMEEGYKTHVGEKGVQLSGG
QKQRVAIARAVLKDPSVLLLDEATSALDTTSEKLVQEALDKLMKGRTTVLVAHRLSTIRK
AGTIAVLHKGRVVEKGSHRELVSISNGHYKQLTSLQEVV
NT seq
3720 nt
NT seq
+upstream
nt +downstream
nt
atggatagcacagaaccttcctctaatggaaacatccagaatgagaaggactcaaagaag
aaagactatgtttcattgatgggtttgtttggagcagcagataaacttgattgctttctg
atgattctaggcggtttaggtgcgtgtactcttggtgctacgcttcctctcttctttgtt
ttcttcgggaaaatgctagactctattggcaatctatctacagatcctaaagccctatct
tcccgcgtttcaaagaatgctctagacttggtctacttaggactggtcacttttctatca
gcctggattggagttgcttgttggacgcaaacaggggaaagacaaacagctagattgcgc
ataaactatctcaaagcaatcttagcaaaagacattactttctttgatacagaagctaga
gattcaaatctcattttccacatctcaagtgatgctatattggttcaagatgcaattggt
gataagacaggccatgtattgcggtatctatctcagttcgtagccggattcgtggtaggt
tttttgtcggtatggcaactaacgctgctcacgttagcagtggttccattgatagcaatt
gcaggtggagggtacgctataatcatgtctacagtctcagagaagagtgaagctgcttat
gctgatgcaggcaaagtagctgaagaggttatttcacaggtgagaacagtgtatgcattt
gtaggagaagaaaaagctgtaaactcttactcaaactctctcaagaaagctctgaaactc
tgtaaaagaagcggtcttgctaaaggcttaggagttggattaacatatagcctcttattt
tgtgcttgggctttgcttttgtggtacgctagtcttcttgtacgtcacggcaaaaccaac
ggcgcaaaagccttcacaacgatcctcaatgtcatttttagcggattcgccttaggtcaa
gccgcgcctagcatatcagctatatccaaaggcagagttgctgctgcaaatatattcaga
atgatagagaacaagaatcttgaaggttctgaaaggctagaggacggaacaactttgcaa
aatgtagctggaaacattgagtttcatcaagtgtctttcgcttatccttccagaccaaac
atggtttttgagaatcttagcttcactataccttcaggcatgacttttgcatttgtcggt
ccaagtggctcagggaaaagcacaatcatatcaatggttcaacgtttctatgaaccaaac
tcaggggagattctcttggatggtaatgacatcaagagattgaagctgagctggttgaga
gaacagatgggtttagtgagccaagaaccagcattattcgccacaaccatagcttccaat
attcttcttggaaaagagaatgctaatatggatcagatcattgaagctgctaaagcagcc
aacgcagattctttcattaaatcattacctaatggttataatactcaggttggagaagga
ggaactcagctctcaggaggacagaagcagaggattgctattgctcgagcggttctaagg
aatccaaagatactactcttagatgaagcaacgagcgctcttgatgctgagtcagagaag
attgtgcagcaagcacttgacaatgttatggaaaaaagaacaacactagtagttgctcat
agattatccaccatccgtaatgtggacaagattgttgtattgagaaatggtcaggttgtg
gaaactggcagccactcagatctactttcaagaggaggagattacgcatctcttgtcaat
gtccaagagacagaacctcaagaaaaccctagatcaattatgtcggaaactggaaaatct
caagctggttcttctagttcaagaagagcttctagctcaagaaggacttcaagcttcagg
gaagtccaagagaagactgataaagattctaatggagaagatttaagctcatcttcaacg
atatgggaactgataaagctgaatgctccagagtggccttatgcgttacttggatcaatt
ggtgcagttcttgctggtgcacaaactccattgttctccatggggattgcttatgtatta
gccgcgttttattcgccctctcctagtgtgatcaaacgtgatgtcgaaaaggtagctatt
gtctttgttggtgttgcagttgtaacagctcctatctatctccttcagcattacttctac
acacttatgggagagcgtcttacctctagggttcgcttatccttgttctcagcgattctt
tcaaatgagattggatggtttgatttagatgagaacaacactggctcactcacttcaatc
ttggctgctgatgctactttggtgaggagtgctctagcagatcgcctctcaacaatagtc
caaaacctgtctcttacagtgacagcattagcaatagctttttactacagttggcgtgtc
gcagctgtagtaacttcttgtttccctcttctcattgccgctgcacttaccgagcaactg
tttctaaaaggctttgggggagattacacaagggcttactctagagcaacttcagtggcg
cgtgaagcgattgagaatataagaactgtggcttcctttggtgctgagaagcagatctca
gagcagtttgcttgtgagctaagcaaacccaccaagagtgcctttctcagaggccatatc
tctggaattggatatggtttttctcaatttctcgccttctgttcctacgctcttggtctc
tggtacgtctcggttttgattaagcacaaggagactaatttttcggatagtatcaaagct
ttcatggtattgatcgtcacggctttctcagtagcggaaacgcttgctttgacaccagat
atcgtgaagggcacgcaagcactcgggtcggtttttagggttttgcatagagagactgag
atacctccaaaccaccctaactcgagattggtcactcagatcaaaggagatatagagttt
agaaacgtgagctttgcgtatcccgcaagacttgatatccccattttccaaaacctaaac
ctaagagtctcagccgggaagagtcttgcggtcgtgggaccaagtggttcggggaagagc
acggtgatcggtctgatcatgagattctacgatgcggacaagggcaatctctgcatcgat
gggaaagatataaaaaccctaaacctacgtagcttgcggaagaagctagcgttagtccag
caagaaccagctctcttttcaacaaccatacacgagaacatcaagtacgggaacgagaac
gcatcggaggcggagataatcgaagccgcgaaagctgcgaacgcgcacgagttcataggc
aggatggaagaagggtacaagacgcacgtgggtgaaaagggagtgcagttatcaggtggt
cagaaacagagagtggctatagcgagggctgttctaaaggatccttcagtgcttctcctt
gatgaggcaacgagtgctttggacacgacctcggagaaactggtccaagaggcgctagac
aagcttatgaagggacgaacgacggtgcttgtggctcataggctctcgaccataagaaaa
gcaggcacgatcgctgttttgcataaaggaagagttgtggagaagggaagtcatagagag
cttgtttccatatctaatggacattataagcaattgacaagtcttcaagaagtggtatga
DBGET
integrated database retrieval system
