Brassica oleracea (wild cabbage): 106295141
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Entry
106295141 CDS
T04124
Name
(RefSeq) lycopene beta cyclase, chloroplastic
KO
K06443
lycopene beta-cyclase [EC:
5.5.1.19
]
Organism
boe
Brassica oleracea (wild cabbage)
Pathway
boe00906
Carotenoid biosynthesis
boe01100
Metabolic pathways
boe01110
Biosynthesis of secondary metabolites
Module
boe_M00097
beta-Carotene biosynthesis, GGAP => beta-carotene
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
106295141
Enzymes [BR:
boe01000
]
5. Isomerases
5.5 Intramolecular lyases
5.5.1 Intramolecular lyases (only sub-subclass identified to date)
5.5.1.19 lycopene beta-cyclase
106295141
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GFIT
Motif
Pfam:
Lycopene_cycl
DAO
Pyr_redox_2
FAD_oxidored
NAD_binding_9
Thi4
Trp_halogenase
Pyr_redox_3
NAD_binding_8
HI0933_like
FAD_binding_3
Pyr_redox
FAD_binding_2
GIDA
Motif
Other DBs
NCBI-GeneID:
106295141
NCBI-ProteinID:
XP_013586400
UniProt:
A0A0D3CLI1
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Position
C5:42957767..42959636
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AA seq
499 aa
AA seq
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MDTLLRTPNKLEFFIPQFHGFERLSPNPSRVKLGVKKRTIRIGSTSTSSSSSALLDLVPE
TKKENLDFDLPLYDTSLNKVVDLAIVGGGPAGLAVAQQVSEAGLSVCSIDPSPKLIWPNN
YGVWVDEFEAMDLVDCLDTTWSGAVVYINDGSEKDLSRPYGRVNRKQLKSKMLQKCITNG
VRFHQAKVTDVVHEEVNSTVVCSDGVKIQASVVLDATGFSRCLVQYDKPYNPGYQVAYGI
VAEVDGHPFDVDKMVFMDWRDKHLDAYPEVKERNSKIPTFLYAMPFSSNRIFLEETSLVA
RPGLKMEDIQERMVARLKHLGINVKRIEEDERCVIPMGGPLPILPQRVVGIGGTAGMVHP
STGYMVARTLAAAPIVANAIVRYLGGGNNNGLRGDELSAEVWRDLWPIERRRQREFFCFG
MDILLKLDLDATRRFFDAFFDLEPRYWHGFLSSRLFLPDLVFFGLSLFSHASNTSRLEIM
TKGTVPLAKMINNLVKDRD
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atggatactctcttgagaacacccaacaagctcgagtttttcatccctcagtttcatggg
tttgagagattaagtccaaatccttcacgggtcaagcttggtgtgaagaaaagaacaatc
agaatcggtagtactagtactagtagtagtagcagtgctcttttggatcttgttcctgaa
accaagaaggagaatcttgacttcgaccttcccttatacgacacttccctgaacaaagtt
gttgatctagctatcgttggcggcggccccgctggtttagccgtggctcagcaagtctcc
gaagctggactctctgtctgctccatcgatccttcccccaaactcatttggcctaacaac
tacggagtttgggttgacgagttcgaagccatggacttggtagactgcctcgacaccacc
tggtccggcgccgtcgtctacatcaacgacggctccgaaaaggacctgtcccggccttac
gggagagtcaaccgtaaacagctcaaatccaagatgcttcagaagtgcatcaccaacggt
gttagattccatcaggctaaagtcactgacgtggttcacgaggaggttaactccactgtg
gtttgcagtgacggtgtgaagattcaggcttctgttgttctcgacgctactgggttttca
agatgcttggtgcagtatgataaaccgtacaacccgggttatcaagtagcttatggtatc
gttgctgaggtcgatggtcacccgtttgatgtggacaagatggtgtttatggactggaga
gataagcatcttgacgcgtaccctgaggttaaagaacggaacagcaagatccctacgttc
ttgtacgcgatgccgttttcttcaaacagaatctttctcgaggagacgtctcttgtggct
aggccgggtctgaagatggaagatatccaagagaggatggttgcgaggctgaaacatttg
gggatcaacgtgaagcggattgaggaagacgagcgttgtgtgatccctatgggaggtcct
ttaccgatcttgcctcaaagagttgttggcattggcggtacagcggggatggttcatcct
tcgactggttacatggttgctaggactcttgcagctgctccgatagttgcaaacgctata
gtgaggtaccttggtggtggtaacaacaacggcttgagaggagatgagctctcggctgag
gtgtggagagacttgtggcctattgagaggcggagacagagggagttcttctgttttggg
atggatattttgctgaagcttgatttggatgctactaggaggttctttgatgcgttcttt
gacctggaaccgcgttactggcatggtttcttgtcgtcgaggctgtttctcccggacctg
gtgttcttcgggctgtcgctcttctcgcatgcttctaatacctcgaggttggagatcatg
actaagggaactgttcctcttgctaagatgatcaacaatttggttaaagatagagactaa
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