Brassica oleracea (wild cabbage): 106295895
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Entry
106295895 CDS
T04124
Name
(RefSeq) protein LHY
KO
K12133
MYB-related transcription factor LHY
Organism
boe
Brassica oleracea (wild cabbage)
Pathway
boe04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
106295895
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
boe03000
]
106295895
Transcription factors [BR:
boe03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-factors
106295895
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-binding
Myb_DNA-bind_7
Myb_DNA-bind_6
Motif
Other DBs
NCBI-GeneID:
106295895
NCBI-ProteinID:
XP_013587350
UniProt:
A0A0D3C707
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Position
C5:407512..411185
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AA seq
607 aa
AA seq
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MDTNTSGDELLTKARKPYTITKQRERWTEDEHDRFLEALRLYGRAWQRIEEHIGTKTAVQ
IRSHAQKFFTKLEKEAEAKGIPVCQALNIEIPPPRPKRKPNTPYPRKPGNNGPSAKLVSS
ASSSQCNQAFLDLETVPISEETSNGKENQDDNCSGVSTVNKCPLPKKVTQPSLRKESADN
GTSKASNVNTQFHPPGMVSQDLMFCPMGDRVHGHVNLPATTTSSATTTTSQQAFPACPSH
DSFLHFSSTFPNLIISSLLQNPAAHAAATFAASVWPYSNVGNSGGDSSTQMSSSPPSIAA
IAAATVAAATAWWASHGLIPVCAPPAPVTCLPLPTFAVPTPAMDKMDTVENDQLPLEKQN
TALQDKKMASKSPASSSDDSEETGVTKLNAGSKTNGDKEEVVVDAAAAAAALHDPNASPK
KKLVDRSSCGSNTPSGSDAETDALDKMEKDNEDVKEADANQQPSVIELSNRRSKIRDNNN
NQTTDSWKEVSQGGRKAFQALFARQRLPQSFSPPQVAAENVNGKQSDTSMPMAPDINKIQ
DSCDADQESGVVMIGDGTGKSLKTRQSGFKPYKRCSMEAKESQDGNANNESDEKVCKRIR
LEGEAST
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
atggatacaaatacatccggagatgagttattaaccaaggcaagaaagccgtatactatt
acaaagcagcgggaacgatggacagaggatgagcatgataggtttcttgaagccttgagg
ctttatggaagggcctggcaacgtatagaagaacatattgggacaaagactgctgttcag
atcagaagtcatgcacaaaagttcttcacaaagctggagaaagaggcagaagctaaaggc
attcctgtttgtcaagctctcaacatagagatcccacctcctcgtcctaaaaggaaaccc
aatactccttatcctcgtaaacctggcaacaatggcccatcagcaaaacttgtatcctca
gcctcttcttcacaatgtaaccaggctttcttggatttggaaacagtgcccatctctgag
gaaacatcaaatgggaaagaaaatcaagatgataactgctcaggggtttctactgtaaac
aaatgtcccttaccaaagaaagttactcaaccgtctctaagaaaggaaagtgccgataat
ggaacaagtaaggcgtcaaatgtgaacactcagtttcatcccccaggtatggtctctcaa
gacttgatgttttgtcctatgggagatcgtgttcacgggcacgtgaatcttccagctacc
acaacatcatctgctactacaactacttctcaacaggcgtttcctgcgtgcccttcccac
gattcgtttctccacttctcctctactttccccaatctcattatctcaagcctcctacag
aatcctgcagctcatgccgcagccacattcgctgcttcggtctggccctattccaacgtc
gggaactcgggaggagattcatcaacgcaaatgagctcctctcctccaagtatagctgcc
atcgctgctgctacggtagctgctgcaactgcttggtgggcttctcatggacttattcct
gtatgtgctcctcctgctccagtcacttgccttccattaccaacctttgcagttccaact
ccagctatggataaaatggataccgttgaaaatgatcaactaccgctggagaaacaaaac
acagctctgcaagataaaaaaatggcttcaaaatctccagcttcatcatccgacgattca
gaagagactggagtaaccaagctaaacgctggctcaaagacaaatggtgacaaggaggaa
gttgttgttgatgctgctgctgctgctgctgctttgcatgatccaaacgcttccccaaag
aaaaagctggtggaccgctcatcgtgtgggtcaaacacaccttcagggagtgacgcggaa
acagatgccttagataagatggagaaagataacgaggatgtgaaggaggcagatgcaaac
cagcagccaagtgttattgagttgagcaaccgtcggagtaaaatcagagacaacaacaac
aaccaaactactgattcgtggaaagaagtctcccaagggggtcgtaaagcgtttcaggct
ctctttgcaagacagagattgcctcagagcttttcacctcctcaagtggctgcagagaat
gtgaatgggaagcaaagtgacacgtcaatgccgatggctcctgatatcaacaagattcaa
gattcttgtgatgcagaccaagagagtggagtagtaatgataggtgatggaacggggaag
agccttaaaacgagacaatcagggtttaagccatacaagagatgttcaatggaggcgaaa
gagagccaagatgggaacgcaaacaatgaaagcgatgaaaaagtctgcaagaggattcga
ttggaaggagaagcttcaacataa
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