Brassica oleracea (wild cabbage): 106317522
Help
Entry
106317522 CDS
T04124
Name
(RefSeq) endo-1,4-beta-xylanase A isoform X1
Organism
boe
Brassica oleracea (wild cabbage)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CBM_4_9
Glyco_hydro_10
Motif
Other DBs
NCBI-GeneID:
106317522
NCBI-ProteinID:
XP_013610782
LinkDB
All DBs
Position
C9:complement(15340428..15344302)
Genome browser
AA seq
949 aa
AA seq
DB search
MKRFTVCCFSNPIHKNKNHNPDKKLRNSMEISRNDNGEHAKQNNNNNVTPVIGSDRTNVI
VNHDFSLGTHSWHPNCCEASVVTADSGIPHGVLDPSKYGSYVVVKNRKETWQGLEQDITS
RVKPCSLYKVSATVAVSGPVQGLEEIIATLKLENQQSPTNYQFIAKTCVFKEKWVRLEGM
FSLPSVPERIVFYLEGPSPGIDLLIQSVTIHLDSEPERERLEGVTVEDENLVVNPNFEDG
LNNWSGRSCKIVCHDSMADGKIIPQSGKAFAAATERTQNWNGIQQEITGKVERKRVYEAT
AVVRIYGNNVTSATVQATLWVQNPNQRDQYIGIANVQATDKEWIQCKGKFLLNGSASRVV
IYIEGPPPGTDILLNSLTVKHAEKIPPSPRPPIENPAFGVNILTNSQLTDGTTNGWFPLG
NCTLSVAEGSPRILPPMARDSLGPHEPLSGRYVLVTNRTQTWMGPAQMITDKLKLFLTYQ
ISVWVKLGSGINSPQNVNVALGIDSQWVNGGQVEINDDKWHEIGGSFRVEKQPSKALVYI
QGPSSGVDLMVAGLQIFPVDRLARIKHLRRQSDKIRRSDVILKFSGVDASKLSGATVKVR
QTRNSFPVGTCISRSSIDNEDFVDFFLKNFNWAVFGNELKWYWTEPEQGKLNYQDADDML
NLCSSNNIETRGHCIFWEVQATVQQWIQKMNQTDLNTAVQNRLTSLLNRYKGKFKHYDVN
NEMLHGSFYQDKLGKDIRVNMFKTAHQLDPSATLFVNDYHIEDGCDPKSCPEKYIEHILD
LQEKGAPVGGIGIQGHIDSPVGPIVCSALDRLGILGLPIWFTELDVSSINEHIRGDDLEV
MMWEAFGHPAVEGIMLWGFWELFMSRDNSHLVNAEGDVNEAGKRLLAVKKDWLSHANGHI
DQNGAFAFRGYHGNYAVEVITSSSQKVLKTFVVEKGDSAQVITVDLQGL
NT seq
2850 nt
NT seq
+upstream
nt +downstream
nt
atgaagagattcacggtctgctgcttctcaaatccaattcacaagaacaaaaatcacaat
ccagacaagaagctaagaaacagcatggagatttcaagaaacgacaatggagagcatgca
aaacagaacaacaacaacaatgtaacaccagtcatcggttctgatcgtaccaatgttatt
gtgaaccatgacttctctttggggacgcattcatggcatccaaattgctgcgaggcctct
gttgtcaccgcagattctggtatccctcacggtgtattagacccgtcaaagtatggcagc
tatgtagttgtcaagaacaggaaagaaacttggcaaggcttagagcaagacataacaagc
agagtgaaaccttgttctctctataaagtttctgcaactgttgccgtctctggtcctgtt
caaggattggaggagattatagccactctgaagctcgaaaaccaacaatcgccaacaaac
tatcagttcatcgcaaaaacttgtgtattcaaggagaagtgggtgagactagaaggcatg
ttctcgttaccaagcgtaccagaaagaattgttttctatttggaaggtccttcaccaggg
attgatctcttaatacagtctgttaccattcaccttgatagcgagcctgagcgggaacga
cttgaaggcgttacagtggaagatgagaatcttgtagtgaacccaaactttgaagatgga
ctaaataactggtctgggagaagctgcaagattgtgtgtcatgactccatggctgatgga
aagataattccacaatctggaaaagctttcgctgcagctacagaacgcacacagaactgg
aacggtattcaacaagagattactggaaaagttgagaggaaacgtgtatatgaagcaacc
gcggttgttcgtatatatggaaacaatgtgacaagtgctactgtgcaagctactctatgg
gtccagaatccaaatcaacgtgaccaatacattggcattgccaatgtgcaagcaacagac
aaggagtggatacagtgtaaagggaagttcctcctcaatggttctgcatcacgagtagtc
atttacattgaaggtccgcctccaggaaccgatattctcctcaacagcttaaccgtaaag
cacgctgagaaaattcctccttcaccgcgcccacccattgagaatcctgcatttggggta
aacatactcaccaatagccagttaactgatggtacaaccaacgggtggttcccattaggg
aactgcacgctaagcgttgcagaaggctcccctcgaatccttcctccaatggcaagggac
tcgcttggaccacacgagcctctaagtggccgctacgtgctcgtgactaaccgaacacaa
acatggatgggccctgctcaaatgatcactgacaaacttaaactgttcttgacataccaa
atatctgtttgggttaaactcggttccggcattaatagtccgcagaatgttaacgtcgca
cttggtattgatagccaatgggtaaacggtggacaagtcgagatcaacgacgataaatgg
catgagattggtggttctttccgagttgagaagcagccatctaaggctttggtttatatt
caaggcccttcttctggcgttgatctcatggtcgctggcttgcagattttcccggttgac
cggctcgccagaatcaagcatttgagaagacaatctgacaagatccgtagaagcgacgtt
atcctcaaattctctggtgttgatgctagcaaactgtctggagctacggttaaagttaga
cagacgaggaacagcttccctgtgggaacttgcatcagcagatcaagtatagataacgaa
gatttcgtcgattttttcttgaaaaactttaactgggcggtgttcggcaacgagctgaaa
tggtactggacggagccagaacaagggaagcttaattaccaagacgcggacgatatgctc
aacttgtgcagtagtaacaacatagaaaccagaggacattgtatcttttgggaggtccaa
gcaactgttcagcagtggatacaaaagatgaaccaaaccgacttaaacacggcggtccaa
aaccgcttaaccagtcttttaaaccgttacaaggggaaattcaaacattatgatgtgaac
aacgagatgttacacggatcattctaccaagacaagctaggcaaagacataagagtcaac
atgttcaaaaccgcacaccaactagacccatctgcgacattgttcgtaaatgattaccac
atagaagacggatgtgatccaaaatcctgcccggaaaagtacattgagcatattcttgac
ctgcaagaaaagggtgcaccggtcggaggaattgggattcaaggccatatcgatagtcca
gtgggtccaattgtttgttcagctctagacagactaggaatccttggtttaccgatatgg
ttcacggagttagatgtctcctccattaatgagcacatcaggggagatgatttggaggta
atgatgtgggaagcttttggacatcctgcggttgaaggcatcatgttatggggattttgg
gagctgttcatgagcagagacaactctcacttggtgaatgcagaaggtgatgttaatgaa
gctggcaaaaggcttttagctgtgaagaaagattggctctcgcatgctaatggacatatt
gatcaaaacggtgcgtttgcatttagagggtaccatggaaattatgctgttgaagtgatt
actagttcatctcaaaaggttcttaaaacgtttgttgtcgaaaaaggagattcggctcag
gttattactgtggatcttcaaggtttgtga
DBGET
integrated database retrieval system
