Brassica oleracea (wild cabbage): 106318289
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Entry
106318289 CDS
T04124
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 12-like isoform X1
KO
K11838
ubiquitin carboxyl-terminal hydrolase 7 [EC:
3.4.19.12
]
Organism
boe
Brassica oleracea (wild cabbage)
Pathway
boe03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
106318289
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
boe01002
]
106318289
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
boe04121
]
106318289
Enzymes [BR:
boe01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
106318289
Peptidases and inhibitors [BR:
boe01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
106318289
Ubiquitin system [BR:
boe04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
106318289
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
USP7_ICP0_bdg
UCH
USP7_C2
MATH
UCH_1
RA
ubiquitin
SASP
Malt_amylase_C
Motif
Other DBs
NCBI-GeneID:
106318289
NCBI-ProteinID:
XP_013611649
UniProt:
A0A0D3EHA5
LinkDB
All DBs
Position
C9:52281839..52302790
Genome browser
AA seq
1116 aa
AA seq
DB search
MTILTPPPGDQQEDEEMLVPHSDLVDGTAQPMEVSETEAAVSTVENQQPAEDPPTLKFTW
TVPNFSRQNTRKHYSEVFVVGGYKWRILIFPKGNNVDHLSMYLDVADAATLPYGWSRYSQ
FSLAVVNQIHTRYTIRKETQHQFNARESDWGFTSFMPLSELYDPSRGYLVNDTVYVEAEV
AVRKVLDYWSYDSKKETGFVGLKNQGATCYMNSLLQTLYHIPYFRKAVYHMPTTENDAPT
ASIPLALQSLFYKLQYNDTSVATKELTKSFGWDTYDSFMQHDVQELNRVLSEKLEDKMKG
TVVEGTIQQLFEGHHMNYIECINVDYKSTRKESFYDLQLDVKGCKDVYASFDKYVEVERL
EGDNKYHAEEHGLQDAKKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKINDRYEFPLELDL
DRENGKYLSPDADKSVRNLYTLHSVLVHSGGVHGGHYYAFIRPTLSDQWYKFDDERVTKE
DLKRALEEQYGGEEELPQTNPGFNNPPFKFTKYSNAYMLVYIRESDKDKIICNVDEKDIA
EHLRIRLKKEQEEKEEKRKYKAQAHLFTIIKVARDQDLKEQIGKDIYFDLVDHDKVRSFR
IQKQTPFQQFKEEVAKEFGVPVQLQRFWIWAKRQNHTYRPNRPLTPQEELQPVGQIREAS
NKANTAELKLFLEVELLVERPIPPPDKSKEDILLFFKLYDPEKQELRYVGRLMVKSSSKP
MDITGKLNEMAGFAPGEEIELFEEIKFEPCVMCEHLDKKTSFKLCQIEDGDIICFQKPFG
NKEIECRYPAVPSFLEYVQNRQLVRFRALEKPKEDEFVLELSKLHTYDDVVERVAEKLGL
DDPSKLRLTSHNCYSQQPKPQPIKYRGVDHLSDMLVHYNQTSDILYYEVLDIPLPELQGL
KTLKVAFHHATKEEVVIHNIRLPKQSTVGDVINELKTKVELSHPDAELRILEVFYHKIYK
IFPLTERIENINDQYWTLRAEEIPEEEKNIGPNDRLILVYHFAKETGQNQQVQNFGEPFF
LVIHEGETLEEIKNRIQKKLHVSDEDFAKWKFAFMSMGRPEYLQDSDVVYNRFQRRDVYG
AFEQYLGLEHTDTSPKRAYSANQNRHTYEKPVKIYN
NT seq
3351 nt
NT seq
+upstream
nt +downstream
nt
atgactatactgactccgcctcccggtgatcagcaagaggatgaggagatgcttgtgccg
cattcagatttggttgacggcactgctcagcccatggaagtttcggaaactgaggctgct
gtgagtactgtggagaaccagcagccagctgaggatcctcccactctgaaattcacgtgg
actgtcccaaacttttctaggcagaacaccaggaagcattactctgaagtatttgtcgtt
ggaggatacaaatggcgcatattaattttcccgaaagggaacaatgtcgaccatttgtcc
atgtacttagatgttgctgatgctgcgactttgccttacggctggagccgatactctcag
ttcagtctggctgtggtcaatcaaatccacaccagatataccattagaaaagaaacgcaa
catcaattcaatgcaagagaaagcgattggggatttacatcattcatgcctctcagcgaa
ctttatgatcctagtagaggctatttagtgaatgatactgtttacgttgaagctgaagtc
gctgtacgtaaggttcttgattactggtcatacgactctaagaaagagactggttttgtt
ggtctcaagaaccaaggtgcaacttgttacatgaattctctcctacagacactataccac
ataccttacttcagaaaggctgtataccatatgccgacaactgagaacgacgcgcccaca
gcaagtatacctttggctctccaaagtttgttttacaagctccagtataacgacactagt
gttgctactaaagagctgacaaagtcgtttggttgggatacatatgattctttcatgcaa
catgatgtccaagaactcaatcgagttctcagcgaaaaacttgaggacaagatgaaggga
actgttgtggagggaacaatacaacagctatttgagggtcaccatatgaattacattgag
tgcataaatgtagattacaaatctacacggaaagaatcattttatgaccttcagctggat
gttaaaggctgcaaggatgtttatgcttcttttgacaaatatgttgaagttgaacgcctt
gaaggagacaacaaatatcatgcagaagaacatggtttacaggatgcaaaaaaaggcgtt
cttttcatcgactttccaccggttcttcagctccagctcaagaggtttgaatatgacttc
atgagggacaccatggtgaagataaatgatcggtatgaattccctcttgaactggatctt
gatagagagaatggaaagtatttatcccctgatgctgacaagagtgtccgcaacctttac
acgcttcacagtgtgttagttcatagtggaggagtacatggtgggcactattacgctttt
ataaggccgacgctctctgatcaatggtataaatttgatgatgaacgagtaactaaagaa
gatttgaaaagggcattggaggagcaatatggtggtgaagaagagctaccacaaactaat
cctggtttcaataaccctcctttcaaattcacaaagtactcgaatgcatacatgcttgta
tatatccgggaaagtgacaaagataaaattatctgcaacgttgatgagaaagacattgct
gaacatttaaggataaggctgaagaaagaacaggaagaaaaggaagaaaaaagaaaatac
aaggcacaagctcacctatttaccataattaaggttgcaagggatcaagaccttaaggaa
caaattgggaaagatatatattttgatcttgtcgatcatgacaaagttcgtagtttccgg
attcagaaacagacaccatttcaacaatttaaggaggaagtggccaaagaatttggtgta
cctgttcagctacagaggttctggatttgggcaaagcgacaaaaccatacctatcgtccc
aatcgcccccttactcctcaggaggaattgcaaccggttggacaaataagagaagcatct
aacaaggcaaacactgcagaacttaagctgtttttggaagtagagttactggttgaacgt
cctattcctcctcctgacaaatcaaaagaagatattcttcttttctttaagctttatgac
cccgagaagcaagagttaaggtatgttggtagactgatggtgaaaagttccagtaagcct
atggatataactggaaaactgaatgaaatggctggctttgctcctggtgaagaaatagaa
ctatttgaggaaatcaagtttgagccatgtgtaatgtgcgaacacctggataagaaaact
tcattcaaactatgtcaaatcgaagatggagatatcatttgctttcagaaaccttttggc
aacaaggaaattgagtgccgctacccagctgtgccttcgttccttgaatatgtccagaat
cggcagctggtccgatttcgtgctctggaaaaacctaaagaagatgaatttgttttggag
ttgtcaaagttgcacacttatgacgatgtcgtggaaagagtggccgagaagcttggtctt
gacgatccatccaagcttaggcttacatctcacaattgctattcgcagcaacccaagcct
cagcctatcaaataccgtggggtagaccatttgtcagatatgttagttcactacaatcag
acgtctgatattttgtattatgaagttctggacattcctcttccagaattgcaaggtctt
aaaaccttaaaagttgctttccatcatgccacgaaggaagaggtggtaatccacaatatc
agactacctaaacaaagtacagtcggagatgttatcaatgaacttaaaacaaaggtggag
ctttcgcatccagatgcagaactgagaatacttgaggtgttttaccacaagatctacaag
attttcccattaactgaaagaattgagaatataaacgaccagtactggactttgcgagct
gaggagattcctgaagaagagaaaaatattggtccaaatgatcgcttaattctagtgtac
cactttgctaaggagactggacaaaatcagcaagtgcaaaacttcggggagccgttcttc
ttggtaatccatgaaggtgaaactcttgaagaaatcaagaaccgtatccaaaagaagctt
catgtatctgatgaggactttgccaagtggaagtttgcgtttatgtcaatggggcgtccg
gagtacttgcaggactcggatgttgtttacaatcgctttcagagaagggatgtctacggt
gcctttgagcagtaccttgggttggagcacactgataccagtcctaagagggcttactct
gcaaaccagaaccgacacacttatgagaagccggtgaaaatatacaattag
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