Brassica oleracea (wild cabbage): 106320204
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Entry
106320204 CDS
T04124
Name
(RefSeq) transcription-repair-coupling factor
Organism
boe
Brassica oleracea (wild cabbage)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CarD_TRCF_RID
ResIII
TRCF
RecG_dom3_C
UPF0492
Motif
Other DBs
NCBI-GeneID:
106320204
NCBI-ProteinID:
XP_013614024
LinkDB
All DBs
Position
Unknown
AA seq
822 aa
AA seq
DB search
MTSLLLPNPDSITTTPLVSNLRSFRRFFSLRRSSLPRNSSSSSLPLVAVSSLSATAAKPT
TATRWREKHELAESDSISILNERIRRDLGKRETARPAMDSKEAEKYIQMVKEQQERGLQK
LKGVRPGSDGGFSYKVDPYTLLSGDYVVHKKVGIGRFVGIKLDVPKDSSEPLEYVFIEYA
DGMAKLPLKQASRLLYRYNLPNESKRPRTLSRLSDTSVWERRKTKGKLAIQKMVVDLMEL
YLHRLRQKRFPYPKNPIMADFAAQFPYNATPDQKQAFLDVDKDLTERETPMDRFICGDVG
FGKTEVALRAIFCVVSAGKQAMVLAPTIVLAKQHYDVISERFSLYPQIKVGLLSRFQTKA
EKEAYLEMIKHGHLNIIVGTHSLLGSRVVYSNLGLLVVDEEQRFGVKQKEKIASFKTSVD
VLTLSATPIPRTLYLALTGFRDASLISTPPPERIPIKTHLSSFRKEKVIKAIKNELNRAG
QVFYVLPRIKGLEEVMDFLEEAFPDIDIAMAHGKQYSKQLEETMERFAQGKIKILICTNI
VESGLDIQNANTIIIQDVQQFGLAQLYQLRGRVGRADKEAHAYLFYPDKSLLSDQALERL
SALEECRELGQGFQLAEKDMGIRGFGTIFGEQQTGDVGNVGIDLFFEMLFESLSKVEELR
IFSVPYNLVKIDININPRLPSEYVNYLENPMEIINEAEKAAEKDMWSLMQFTENLRRQYG
KEPYSMEIILKKLYVRRMAADLGGNRIYASGKMVVVKTNMSKKVLKLITDSMTCDVYRSS
LIYEGDQIMAELLLELPREQLLNWMFQCLSELHASLPALIKY
NT seq
2469 nt
NT seq
+upstream
nt +downstream
nt
atgacatccttgctcctcccaaatcccgactcgattaccaccacacccctcgtttccaac
ctacgctccttccggaggttcttctctctcagacgctcctccttgccccgaaactcgtca
tcatcatctcttccactagtcgctgtgtcctctctctccgcaactgccgcaaaacctact
acagcgaccaggtggagagagaagcatgagttagctgaaagcgattcaatctccatcctc
aacgagaggattcggcgggacctgggaaagagagagactgctaggccggccatggactct
aaggaggccgaaaagtacattcagatggtaaaggaacaacaagagaggggtctccagaag
ctcaaaggagttaggccaggttcagacggtggtttcagctacaaggttgacccttacact
ctcctttccggtgattatgtggtgcacaagaaggttggcattggccgttttgtcggcatt
aagttggatgtccccaaggattcttctgagccccttgaatatgtgtttattgagtatgct
gacggcatggccaagcttcccctcaagcaagcctcccgtctcctctaccgatacaacctt
cctaatgagtccaaacggcctcggactttaagtcggctgagtgacactagtgtttgggaa
agaagaaagaccaaaggcaaactcgctattcagaaaatggtcgttgacttgatggagctc
tatcttcataggcttagacagaagagatttccctatccaaagaaccccatcatggctgat
ttcgctgctcaatttccttataacgctacacctgaccagaagcaggctttccttgatgtt
gacaaggatttgactgagagagaaacacctatggaccgattcatatgtggagacgttgga
tttggtaaaactgaggttgctctacgtgccatcttttgtgtggtctccgctggcaaacaa
gctatggttttagcacccactattgttttggccaagcaacattacgatgtcatctctgag
cggttttccttgtatccccaaatcaaagtcggtcttttaagtcggtttcagaccaaagca
gagaaggaggcgtatttggaaatgataaaacacggtcatctcaatatcattgtaggtact
cactcccttctcggaagccgtgttgtgtacagcaatctaggccttcttgtcgtcgatgag
gaacagagatttggggtcaagcagaaagaaaagattgcatctttcaaaacgtcagtggat
gtgcttaccctctccgcaacacctataccaaggacgttatacttagctttgactggattc
cgggatgccagtttaatctccacaccgccaccggagaggattccaataaaaacccatctt
tcatcgttccgtaaggaaaaggttatcaaagcaataaaaaatgaactgaatcgtgctggc
caagttttctacgtcttgcctcgaattaaaggactagaggaagtgatggattttcttgaa
gaagcatttccagatatcgacattgctatggcacatgggaagcaatactcaaaacaacta
gaggaaaccatggagagatttgcgcaaggaaagatcaaaatcctcatatgcactaatatt
gttgaaagcggacttgatattcaaaatgcaaataccataatcatccaggatgttcaacaa
tttgggctcgctcagttgtaccagttgcgtggaagggttggccgggctgataaagaagct
catgcctacctgttttatcctgataaatcgctgctctctgatcaagcactggaaaggctt
agtgctcttgaagagtgtcgtgagcttggacaaggtttccaacttgcggagaaagacatg
ggtataagaggctttgggacaatttttggtgaacagcagacaggagatgttggaaatgtc
ggcatcgatctcttctttgaaatgctttttgagagtctatccaaggtggaggaactccgt
attttttcggttccatacaatctggtgaagattgacataaatataaatcctcggctgccg
tccgagtatgtaaattacctggaaaatccgatggagatcatcaatgaagctgaaaaagca
gctgagaaagatatgtggagtctcatgcaattcacagagaacttacgtcgccaatatggg
aaagaaccttactccatggagatcattttgaagaagctgtatgtgagacgcatggcggct
gatcttggaggaaacagaatttatgcatcagggaagatggttgtggtgaaaacaaatatg
agtaagaaggtgctcaagctgatcacagattccatgacttgtgacgtttaccgaagctcc
ttgatatatgaaggagatcaaataatggcggaacttctgctggagctaccaagagaacag
ttactgaactggatgttccagtgcttgtcagaactgcatgcatcactccctgctcttatc
aaatactag
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