Brassica oleracea (wild cabbage): 106326306
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Entry
106326306 CDS
T04124
Name
(RefSeq) protein FAM63A-like
KO
K01309
ubiquitin carboxyl-terminal hydrolase MINDY-1/2 [EC:
3.4.19.12
]
Organism
boe
Brassica oleracea (wild cabbage)
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
boe04121
]
106326306
Enzymes [BR:
boe01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
106326306
Ubiquitin system [BR:
boe04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
MINDY
106326306
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Gene cluster
GFIT
Motif
Pfam:
MINDY_DUB
Motif
Other DBs
NCBI-GeneID:
106326306
NCBI-ProteinID:
XP_013619773
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All DBs
Position
C1:10167449..10171485
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AA seq
653 aa
AA seq
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MAIDFSQLPPPTSNFPAKKKQTNQIQASSQNEAGKNLSYKTKEIKFRKRDRQIVLQSENG
PCPLIAICNVLILRNEMNLYPDRDRFQVSQERLLSLVADVLFDSYHDDDDDEFTENQQHR
IADAINLLPRLADGINVNIRFRRIDDFESTPELAIFDLLSIPLFHGWIVDPHDFETANAI
GCKSYNDLMTGLVTLETQTLKARIGSKECSLDFTATFTPTQRCLKKTRSFADSTPTSAEH
SQLGRGDIEEERVLLRALRFSERENLGIYTRRDSSSGGDSVSGYSDVYLMSESDSLVDSM
DAGSPCTSTPGSGNTCQKSKCNDQVSSKESGDETVCVLGNKFDVAEETHSSTPGALASEQ
LSSTELGDETASDVESNIKMVDVHVILEKNNQESTKSASSSEIQFKSEAVTFVNTDLTDR
SQDDDNVAMYEAEKSVTLGSPVYKGQSPLGQSSSEGKDTNGVTPREGEVIKNFLNNNASQ
LTFPGLFFLEQGFEEGELCVFFRNNHFYTMLKYDNELYNLVTDQGYLNERDLVWEKLNEV
NGDSVFVDGDFKVFRCESGNWDQQYALSSTADYIYSINSASKEGMEVDPDLKMAMELQEQ
ELGEDIGFEVPMKKQSHVFFFFFSTRSESSPTMVQRWHMYNHECKFSSLPCKG
NT seq
1962 nt
NT seq
+upstream
nt +downstream
nt
atggcgatcgatttctcccaacttcctcctccgacttcgaattttcccgccaaaaagaag
cagacgaatcagattcaggcctcctcgcagaacgaagctgggaagaatctcagttacaaa
acgaaggagatcaagtttcgtaagcgagataggcagatcgttctccagagcgagaacgga
ccgtgtcctctgatcgccatttgtaacgttctgatcttgagaaacgagatgaatctatat
cctgatcgtgatcgattccaagtatctcaagagaggctgctgagtcttgtggcagacgta
ttgtttgatagctatcatgatgatgatgatgatgagtttactgagaaccagcaacacaga
attgctgacgccattaatctccttccacgtttggcggatggcattaatgtcaatattaga
ttcaggaggattgatgactttgagtctacacctgagctagctatatttgatttactcagt
attcccttatttcacggatggattgttgatccccatgattttgaaaccgctaatgcaatt
ggatgcaaatcttataatgatttgatgactggacttgttactttggagacacagactcta
aaggctcgaatcggctctaaagaatgctctcttgattttactgctacgtttactccaact
caacgttgtttgaagaaaacaagatcttttgctgactctacacctacatctgctgagcat
agtcaactcggaaggggagatattgaagaggaaagagtgttgctgcgagccttgaggttc
tctgaaagggaaaatcttggtatttatactcgcagagactcgagcagtggaggagactct
gtgtctggatactcagatgtatatcttatgtctgagagtgactcattagtagattctatg
gacgctggatctccttgtactagcacccctggaagtggtaatacctgtcagaagtctaaa
tgtaatgatcaggtttcttctaaggaatcaggagatgagacagtttgtgttcttgggaat
aagtttgatgtggcggaagagacacattcttcaacaccaggcgctcttgcaagtgagcag
ctgtcttcaacggaattgggagatgagacggcttctgatgtcgagagtaacatcaaaatg
gttgatgtgcatgttattttggagaagaataatcaggagtcaaccaaaagcgctagcagc
tctgagattcaattcaagtctgaagctgtaacttttgttaacacagatcttacggacaga
tcccaggatgatgataatgtagccatgtatgaagctgagaaatctgtaaccttaggctct
ccagtgtataaaggccagtcacctcttggccaaagctcttctgaagggaaggatacaaat
ggggtcacgccaagagagggtgaagtgatcaagaacttcttgaataataatgccagccaa
ttgacgtttcccggtctctttttcttagaacaaggctttgaagaaggtgaactttgtgtc
ttctttcgcaacaatcacttctacaccatgcttaagtatgacaatgaactctataatctg
gttactgatcaaggctatttgaatgagcgagacttggtttgggagaaactaaacgaggtg
aatggcgattcagttttcgtggatggtgacttcaaggtcttcaggtgtgagagtggcaac
tgggatcaacaatatgcacttagtagtactgcggattatatctacagcatcaacagtgca
tcaaaagaaggcatggaggttgatcccgatcttaaaatggcgatggagttgcaggaacaa
gagttgggtgaagacattggttttgaggtaccaatgaagaagcagtcacatgtcttcttc
ttcttcttcagtacaagaagtgagagcagtccaacgatggtccaaagatggcatatgtac
aatcatgaatgtaaattctcctccttgccctgtaaaggttag
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