Brassica oleracea (wild cabbage): 106334535
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Entry
106334535 CDS
T04124
Name
(RefSeq) nuclear pore complex protein NUP214 isoform X1
KO
K14317
nuclear pore complex protein Nup214
Organism
boe
Brassica oleracea (wild cabbage)
Pathway
boe03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
106334535
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
boe03019
]
106334535
Messenger RNA biogenesis [BR:
boe03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
106334535
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
106334535
NCBI-ProteinID:
XP_013628282
UniProt:
A0A0D3BN98
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Position
C3:complement(64638984..64647592)
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AA seq
1749 aa
AA seq
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MGKFEIAEEVEGDRVGSNDYYFDRIGEPLSIKEEDAQYDLENPPSQPLAISERRGLVFIA
HSSGFLVGRTKDVIAASKNSSRVCVQEIALVDVPVGDVRILSLSADDSILAASVDDEIHF
FSVDSLLNKDAKPSFSYSPDESGFVKDFRWTRKDKHSYLVLSSNGKLFHGSDSAPPKHVM
DGVDAVAWSSKGSYIAVAQDNSLRILSSKFNEKRCIALSFDSWIGDSDENCVVKVDSIKW
VRQNCILLGCFQLIDGMEENYLVQVIRSPDGKITDGSSNLVALSFSDLFPCSMDDLVPVG
VGPHLLFSYVDQCKLAITANRKSIDEHIVLLNWSPGDDESAVSVVDIDRETFLPRIGLQE
NGDDNMIMGLCVDMVSVEGTVNVRSGGDELKELPPFCVLACLTLEGKLVMYNVASVSGLP
DSSDVDLASSSDIEDAYAPSVGDDLPGQSSEESEQQRKFNFSVQNEEKHLNSENSVSLLP
TEQRFQKEEISKKETESVKSSVSGDNNVKQEPYAGKLLQAADGQQSIIPRQFGTSSVQPP
SSVGFETKIFAGLGHIFPVPDKPQKDITEQSNSMNFQTSFGSKSTPGLFAFSGPQNAIVT
PPQNTPAQLWSSGKGVSPPSFGSGLFPSVKNTQQKQPEQTGTGYVNPPTCIREKPVQAIE
TTRASALSILTPPLGQSQDADEGVEKIDPLPSIRASQLSLQVKSSFEKSSNHQQHKTPLN
AGPLRLEHAMSKQPSNINEMAREMDALLQSIEGPGGFKDSCTSLLTGHIEELEQGLEILA
GKCQTCKSITHEQQGEIQHLLDKTIQVLAKKTYMEGMYKQTSDDQYWQLWNRRRLNPELE
AKRQHIVKLNKDLTHQLIELERYFNRLELDRYQDDGGLPLAGRGVPNRSAPSRRVQSLHS
LHNTMSSQLAAAEQLSDCLSKQMTFLKIDSPVKKNVKQELFETIGIPYDASFNSPDAVKA
NNASSAKNLLLSSIPASINAQSKQRQSSGTKSSDPETARRRRESLDRNWAAFEPPKTTVK
RMLLQEQQKTGTNQQILSSERLRPKVNTQEQSLLRLKDHASPVVSSNKGIMKSFQQNTSE
AQSTPFKSTPAMPQSNSPFNLSPTPTVFEQTEKKAGGFKFSEGKANMFPDRSAGSVQQQP
TGAPVQSQFGFNTNSSMPGNRLTFPAAIVSASSSPLSSTSLASVSTLPTPSSRSLPSSPK
DSVSVPTSIPISLASLPQTLSVAPTSTVSATGISAPFGKSLTSASLDLNQAATSTPSPSP
GPTAGFSFKLPASSPSSPEIVSSSTGQSSVFPSSTASQVSTSLVSATSSPTDSNRLFSST
SSSLTPPITSTAPGAFKFSQVSTPSSAVSTAEPVSEPKKLETQSSSILSTGSTAEPVAKA
TTSQTELLPVKSEISTSETTVTTPVSTSGFLSGFSSATQSSPVSMAPPSFSWPGSSQPQQ
PSPTPVSFPTSFSTSASPLGEKKDTVDTQEDEMDEEAPEASPAAELSMTGFGGFGLGSTP
NPAAPKSNPFGGSFGNATTATSNPFNMTVPSGELFRPASFSFQNPQPSQPTGFGGFSTTP
SQTPTQGGFGQPSQVGVGQQALGSVLGSFGQSRQIGAGLPGGTFGSPTGFGGSSPGSGLP
NAPASGGFAAAGSSATGGFAAMASTGRGFAGASSSPTGGFAGLASGSGGFGGAAPGSGGG
GFGGVGSGSGGFGSFAPPNSGGFAGASGGGGFGGFAGQGQGGGGGFSGFGGNTGGAGGKP
SELFTQMRK
NT seq
5250 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaatttgagatagcagaagaggtggaaggagatcgcgtcggctctaacgattac
tacttcgacagaatcggcgaacctctctctatcaaggaagaagacgctcagtacgatctc
gaaaaccctccgtcgcagcccctcgctatctccgaacgccgcggcttagttttcatcgca
cattcctccgggtttcttgtgggaaggaccaaggatgtgattgctgcttccaagaacagt
agtagggtttgtgtccaggagatagctcttgtggatgttcctgtaggggacgttcgtata
ttgtcgctctcagctgatgattcgattctcgcggcctctgtcgatgatgagattcacttc
ttctctgtggattcacttcttaacaaggatgcaaagccttctttttcttattcacctgat
gagtcaggctttgttaaggattttcggtggacaaggaaagataaacattcttatcttgtt
ctttcaagcaatgggaagctctttcatggatctgatagtgcaccccctaaacatgttatg
gatggtgttgacgccgttgcatggagttcaaaagggagctatattgctgtggctcaagat
aatagcctgcgtattttgtcgtcaaagtttaacgagaagcgttgcatagcactatcattt
gactcatggattggtgattctgatgaaaactgtgttgtgaaagttgattctatcaaatgg
gtacgccagaactgtattctgctcggatgctttcagctgattgatggcatggaagaaaat
tacctcgttcaggttatcaggagtccagacgggaagattactgatggttcgtctaatctg
gttgctttatcattctctgatttgtttccatgttcaatggatgatcttgttccggttggt
gttggacctcatttactctttagctacgtagaccaatgcaaactggcgatcacagcaaac
aggaagagcatagatgagcatattgttttgcttaattggtcacctggtgatgatgaaagt
gcagtttccgttgttgatattgaccgagagacctttttgccaaggattgggctccaagaa
aatggagacgacaacatgatcatgggactctgtgtcgatatggtttctgttgaggggacc
gttaatgtccgttccggaggtgatgaactgaaagaactccctccattttgtgttctcgca
tgcctcactttggaaggaaagctggtcatgtataatgttgctagtgtttcaggactccca
gattcatctgacgttgatttggcttcttcttctgatatagaagatgcttatgccccttca
gttggagatgatcttcctggacaatcttcggaagagtctgaacaacaacgaaaatttaat
ttttcggtacaaaatgaagagaaacacctcaactcagagaattcagtttctctgttgcct
accgaacaaaggttccaaaaggaagaaatttctaagaaggaaactgagtctgtaaaaagt
tcagtgtctggggacaacaacgtgaaacaagaaccctatgctggaaaattattacaagcc
gcagatggtcaacaaagcataattcctcggcagttcggaacaagttctgtacaacctcct
tcgtccgtaggatttgaaaccaaaatttttgcaggactcggtcatatcttccctgttcct
gataaacctcagaaagatataacggagcagtctaactctatgaattttcagaccagtttt
gggtcaaagagtacaccaggcttatttgcattttccggcccgcagaacgctattgttacg
ccaccacaaaatacaccagcgcagctatggtcaagtgggaaaggcgtctcacctccaagt
tttggctccggtctgtttccatcagtgaaaaatactcagcaaaagcaacctgaacagact
ggaactggttatgtgaatcctcctacgtgcatcagagagaagcctgtacaagctattgag
actactagagcatcagcgttgagcattctaactcctccgctaggccaaagtcaggacgct
gatgaaggggtagaaaaaatcgatcccctaccgtctatccgtgcctctcagctgtcacta
caagtgaaatcttccttcgaaaagtcctctaatcatcagcagcacaaaactccgctcaat
gctggacctctgagacttgagcatgccatgtcaaagcaacccagtaatataaatgagatg
gccagagaaatggatgcccttttacagtccattgaaggaccaggtggtttcaaggattct
tgcacctcattacttacaggtcatattgaagaattggagcaaggacttgaaattcttgct
ggcaagtgccaaacgtgcaagagcataactcacgagcagcaaggagagatccaacatctt
ctggacaaaacaattcaagttttggcaaagaagacatacatggaaggcatgtataagcaa
acttcggatgaccagtattggcaactttggaaccgccggaggttgaatcctgagcttgaa
gccaaacggcagcatattgtgaaactaaacaaggatttgactcatcaactgattgaacta
gagagatattttaatcggcttgaactggatcgctaccaagacgatggaggacttcctctg
gccggaagaggtgtgccaaataggtctgctccttcaagacgtgtgcaatcccttcatagc
cttcacaacacaatgagttcccaattggcagctgctgagcaactctctgactgtctctca
aaacaaatgacctttttgaaaattgattcacctgtcaaaaagaatgtgaagcaggagttg
tttgagacaatcgggatcccttatgatgcttcattcaactcgccagatgctgtaaaagcc
aacaatgcatcgtcagctaaaaacctattactctcttcgattcctgcaagtataaatgca
cagtcaaaacaacgccagtcatctggtacgaaaagttctgaccctgaaactgccaggaga
aggagagaatcattagacaggaactgggctgcttttgagcctccgaaaacaactgtcaaa
aggatgcttctgcaggagcaacagaagacgggtacgaaccaacagattttgtcgagtgag
agattacggcctaaggttaatacacaagagcaatcactgcttcgcctgaaggatcatgca
tcacctgtagtctcctcgaataagggaataatgaaatcattccaacaaaacacatctgaa
gctcaatcaaccccgttcaaatcaacgccagctatgccacaatctaacagcccctttaac
ctctctccaacaccgactgtatttgaacagacagaaaagaaggctggaggatttaaattt
tctgaaggcaaggcaaatatgtttcctgatagatctgctggaagtgtgcagcagcagcct
actggtgcacctgtgcaatcacagtttggtttcaataccaatagcagtatgcctggaaac
agattaacttttcctgctgcaattgtatcagcttcatcttcacctttgtccagcacgtct
cttgcttccgtttccaccttacctacaccgtcatcacgttcattgccatcctctccgaaa
gattcagtttcagttccaacatctattcccatcagcttagcatcactcccacaaacactt
tcagttgcgccgacatctacagtttcagctacagggatcagtgctccatttggtaaatcg
ttgaccagtgccagtttagatctcaatcaagcagctacgtcaacaccttctccatcacct
ggccctacagctggtttctcttttaagttaccagcttcgtctccatcgtcccctgaaatt
gtctcatcttcaacaggccaatcttcggtttttccatcttcgacagcatcacaagtgtca
actagtctggtctctgcaaccagttccccaacagacagcaatcgtttgttttcatcaacc
tcttcatctttaactccccctattacttctaccgctcctggcgcgtttaagttttctcaa
gtttctaccccgtcgtctgctgtgtccactgcagagccagtctcggaacctaaaaaacta
gagactcaaagttcctcaattctaagtacgggaagtactgcagagcctgtagcaaaggca
acaacatcacagactgagctgctgccggtgaaaagtgaaatttcgacctcagagactaca
gtaacaacccctgtcagtacatctgggttcctttctggattttcatccgcaacacagtct
agtcctgtaagtatggcgcctccttcattcagttggcctggtagttctcagccgcaacag
ccatcgccaacacctgtctctttccctacatccttttcaacttcagcaagtccattgggt
gagaaaaaagacactgtagatacacaggaagatgaaatggacgaagaagctccagaggct
agcccggcggctgaacttagtatgactggttttggaggttttgggcttgggtcaactcca
aacccggctgctcccaaatcaaatccatttggtggttcctttggtaatgctacgacagca
acaagtaatccgttcaatatgacagtccccagtggcgagctattccggcctgcatcattc
agttttcaaaatcctcaaccatctcaaccgacaggttttggcgggttttctacaacgcct
tctcaaactcccactcagggcggatttggccaaccgtcgcaggttggcgtaggacagcaa
gctctaggatcggtactgggttcatttgggcagtcgaggcagattggtgctggtctccca
ggaggtacgtttggttctcctaccggatttggtggctctagcccaggaagcggcctccca
aatgcaccagcatctggtggttttgcagctgctggctccagtgctactggtggctttgct
gccatggcttcaactggtaggggattcgcaggtgcttcttccagtccaactggtggattc
gctggcttagcctcaggtagtggtggtttcggcggtgctgctccaggatccggtggtggt
ggatttggtggagttggttcaggctcgggagggtttggaagctttgctcctcctaatagt
ggaggttttgctggagcatcaggaggtggtggttttgggggtttcgctgggcaagggcaa
ggcggtggtggtgggttctcagggtttggtgggaacacgggaggagcaggaggaaagcca
tcggaactcttcacacagatgagaaaatga
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integrated database retrieval system
