KEGG   Brassica oleracea (wild cabbage): 106336998
Entry
106336998         CDS       T04124                                 
Name
(RefSeq) deoxynucleoside triphosphate triphosphohydrolase SAMHD1 homolog
  KO
K22544  deoxynucleoside triphosphate triphosphohydrolase SAMHD1 [EC:3.1.5.-]
Organism
boe  Brassica oleracea (wild cabbage)
Pathway
boe03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:boe00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    106336998
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:boe03400]
    106336998
DNA repair and recombination proteins [BR:boe03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    Other HR factors
     106336998
SSDB
Motif
Pfam: HD HD_assoc_2 Rad21_Rec8_N
Other DBs
NCBI-GeneID: 106336998
NCBI-ProteinID: XP_013631462
UniProt: A0A0D3C045
LinkDB
Position
C4:complement(37387898..37391854)
AA seq 472 aa
MGAYCNDDLNMPVYSAGAPTNELRFSKHVYDNVHGNIYLDPLCLKFIDTEQFQRLRELKQ
LGVTNMVYPGAVHSRFEHSLGVYWLAGETAQKLKNFQGMELDIDKHDLQTVRLAGLLHDI
GHGPFSHMFEREFLPKVMSGSEWSHESMSVKMIDHIVDTHNIDIDAQMLKRVKDMILAST
EFSQLKSNAEKRFLYDIVANGRNGIDVDKFDYLVRDSRACGLGCNFQFQRLTETMRVMDN
EICYRAKEYRNVHKLFATRADLYRTVYTHPKVKAIELMIVDAMVKANDYLGISTNIDDPA
EYWKLDDTILKTIEIAPDQELAEAKDLILRVRRRQLYQFCNEYAVPKEKIEHFKAVTAQD
IVCSQKHTSLTLKEEDIAVTNVKIDLARGRENPLECIKFFKDYESEEKFVIPEERVSHLL
PTTFQDMIVRVYAKKPELVEAVSEAFENFQVRTYGIKAQVHETPEKKKRRVM
NT seq 1419 nt   +upstreamnt  +downstreamnt
atgggagcgtattgcaacgacgacctaaacatgccggtttactccgccggcgctccgacg
aacgagctccgattcagcaagcatgtctacgacaacgttcatggcaacatctacctcgat
cctctttgcttaaaattcattgacacggagcagtttcagaggcttcgtgaactaaagcag
cttggagtgacaaacatggtttacccgggagctgtgcattctaggtttgagcattctctt
ggtgtgtattggcttgcaggcgaaactgcacagaagctaaaaaatttccagggaatggag
ctcgatattgacaaacatgatcttcagactgtgagacttgcgggacttctccatgatatt
ggccatgggcctttcagccatatgtttgagcgtgagttcctgccaaaggtcatgagtggc
tctgagtggtctcatgagtcaatgtctgtaaagatgattgaccatattgtggacacgcat
aacattgatattgatgctcaaatgttgaaaagagtgaaggatatgatcctagcaagtact
gaattttcacagctgaaaagcaacgcagagaaacgtttcttgtatgacattgttgctaat
ggtcgaaatgggattgatgtggacaagtttgactaccttgtccgtgattctcgagcttgt
ggactgggatgcaactttcagttccaaagactgacagagacgatgagagtcatggacaat
gaaatctgctatcgcgctaaggaataccgtaacgttcacaagttatttgcaacacgtgct
gatctctatcgaactgtctacacacatccgaaagtaaaggcaatagagcttatgatagta
gatgctatggtcaaagccaacgattacttggggatttctactaacattgacgacccagct
gaatactggaagttggacgatacaatcctgaaaaccattgaaatagctccagatcaagaa
cttgcagaagctaaagacctgatactccgcgttcgcagaaggcagctgtaccaattctgt
aacgagtatgcggttccaaaggaaaaaatcgaacatttcaaagccgtcactgctcaagat
atcgtctgttctcagaagcatacaagcttaacactcaaagaggaggatatcgctgttacc
aatgtcaagattgatttagctcgtgggagagaaaaccctcttgaatgcatcaagttcttc
aaggattacgagagtgaagagaagtttgtgatacctgaggaaagagttagtcacttgtta
ccaacaacatttcaagacatgatagtgagagtatatgccaagaaaccagaactggtggaa
gcagtttctgaagcatttgaaaacttccaagtgagaacgtatggaatcaaagctcaagtt
cacgaaacacctgagaaaaagaaacgccgtgtcatgtaa

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