Brassica oleracea (wild cabbage): 106342061
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Entry
106342061 CDS
T04124
Name
(RefSeq) vacuolar protein sorting-associated protein 32 homolog 2-like
KO
K12194
charged multivesicular body protein 4A/B
Organism
boe
Brassica oleracea (wild cabbage)
Pathway
boe03250
Viral life cycle - HIV-1
boe04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
106342061
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
106342061
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
boe04131
]
106342061
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
boe04147
]
106342061
Membrane trafficking [BR:
boe04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-III complex
106342061
Exosome [BR:
boe04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
106342061
Exosomal proteins of other body fluids (saliva and urine)
106342061
Exosomal proteins of colorectal cancer cells
106342061
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Snf7
DUF948
FRB_dom
TraF_2
MACPF_D2
DUF6103
Spatacsin_C
Motif
Other DBs
NCBI-GeneID:
106342061
NCBI-ProteinID:
XP_013636314
UniProt:
A0A0D3A3J5
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All DBs
Position
C1:complement(5479849..5481451)
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AA seq
212 aa
AA seq
DB search
MMNRLFGKPKHEGNALQTLDKLNETLEMLEKKEKVLLKKAGQEVEKAKEYTRAKNKRAAI
QCLKRKRLYEQQVEQLGNFQLRIHDQMIMLEGAKATTETVEALRSGASAMKAMQKATNID
DVDKTMDEINEQTENMKQIQEALSTPIGAAADFDEDELEAELEELEGAELEEQLLQPTPM
PSVPGRQPVRPAAPKRTAEEEELAALQAEMAL
NT seq
639 nt
NT seq
+upstream
nt +downstream
nt
atgatgaatcggctatttgggaagcccaagcatgagggtaatgctctccagacattagac
aagctcaacgagacacttgagatgctagagaagaaggagaaagtgctcctgaagaaggct
ggacaagaggttgagaaggccaaagagtacactcgtgctaaaaacaaacgcgcggctata
cagtgtttgaaaaggaagaggttgtatgagcaacaagtcgaacagcttggcaacttccag
ctccgtattcatgaccaaatgattatgttagaaggcgcaaaagcaacaacagagactgtt
gaagcgttgaggagtggagcttctgctatgaaagccatgcagaaagctacaaacattgat
gatgtggacaagaccatggacgagatcaatgagcagacagagaacatgaaacagatccaa
gaagcattgtctactccaattggggcagctgctgacttcgatgaggatgagcttgaagca
gagcttgaagagctagaaggtgcagagcttgaagaacaacttcttcagccgacaccaatg
ccttcagttccagggcgtcaacctgtccgtcctgctgctcctaagcggacagctgaggaa
gaagaactcgctgcgttacaggctgagatggccctctaa
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integrated database retrieval system