KEGG   Brassica oleracea (wild cabbage): 106342061
Entry
106342061         CDS       T04124                                 
Name
(RefSeq) vacuolar protein sorting-associated protein 32 homolog 2-like
  KO
K12194  charged multivesicular body protein 4A/B
Organism
boe  Brassica oleracea (wild cabbage)
Pathway
boe03250  Viral life cycle - HIV-1
boe04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:boe00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    106342061
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    106342061
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:boe04131]
    106342061
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:boe04147]
    106342061
Membrane trafficking [BR:boe04131]
 Endosome - Lysosome transport
  Endosomal sorting complexes required for transport (ESCRT)
   ESCRT-III complex
    106342061
Exosome [BR:boe04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   106342061
  Exosomal proteins of other body fluids (saliva and urine)
   106342061
  Exosomal proteins of colorectal cancer cells
   106342061
SSDB
Motif
Pfam: Snf7 DUF948 FRB_dom TraF_2 MACPF_D2 DUF6103 Spatacsin_C
Other DBs
NCBI-GeneID: 106342061
NCBI-ProteinID: XP_013636314
UniProt: A0A0D3A3J5
LinkDB
Position
C1:complement(5479849..5481451)
AA seq 212 aa
MMNRLFGKPKHEGNALQTLDKLNETLEMLEKKEKVLLKKAGQEVEKAKEYTRAKNKRAAI
QCLKRKRLYEQQVEQLGNFQLRIHDQMIMLEGAKATTETVEALRSGASAMKAMQKATNID
DVDKTMDEINEQTENMKQIQEALSTPIGAAADFDEDELEAELEELEGAELEEQLLQPTPM
PSVPGRQPVRPAAPKRTAEEEELAALQAEMAL
NT seq 639 nt   +upstreamnt  +downstreamnt
atgatgaatcggctatttgggaagcccaagcatgagggtaatgctctccagacattagac
aagctcaacgagacacttgagatgctagagaagaaggagaaagtgctcctgaagaaggct
ggacaagaggttgagaaggccaaagagtacactcgtgctaaaaacaaacgcgcggctata
cagtgtttgaaaaggaagaggttgtatgagcaacaagtcgaacagcttggcaacttccag
ctccgtattcatgaccaaatgattatgttagaaggcgcaaaagcaacaacagagactgtt
gaagcgttgaggagtggagcttctgctatgaaagccatgcagaaagctacaaacattgat
gatgtggacaagaccatggacgagatcaatgagcagacagagaacatgaaacagatccaa
gaagcattgtctactccaattggggcagctgctgacttcgatgaggatgagcttgaagca
gagcttgaagagctagaaggtgcagagcttgaagaacaacttcttcagccgacaccaatg
ccttcagttccagggcgtcaacctgtccgtcctgctgctcctaagcggacagctgaggaa
gaagaactcgctgcgttacaggctgagatggccctctaa

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