Brassica oleracea (wild cabbage): 106342220
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Entry
106342220 CDS
T04124
Name
(RefSeq) ABC transporter B family member 1
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
boe
Brassica oleracea (wild cabbage)
Pathway
boe02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
106342220
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
boe02000
]
106342220
04147 Exosome [BR:
boe04147
]
106342220
04090 CD molecules [BR:
boe04090
]
106342220
Enzymes [BR:
boe01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
106342220
Transporters [BR:
boe02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
106342220
Exosome [BR:
boe04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
106342220
CD molecules [BR:
boe04090
]
Proteins
106342220
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_16
Zeta_toxin
ABC_ATPase
AAA_22
AAA_29
RsgA_GTPase
AAA_5
AAA
nSTAND1
AAA_30
SbcC_Walker_B
AAA_15
APS_kinase
AAA_25
DUF87
Rad17
ECH_2
Motif
Other DBs
NCBI-GeneID:
106342220
NCBI-ProteinID:
XP_013636542
UniProt:
A0A0D3C4N2
LinkDB
All DBs
Position
C4:49515947..49521688
Genome browser
AA seq
1335 aa
AA seq
DB search
MSQESVQTVEEEEIKSVEEQWRLSEMQALEFLPEASSDNNNSRNPVTELREHPPEMENNG
APPSPPEPKKAEICGVAFKELFRFAGGLDYALMAIGSVGAFVHGCSLPLFLRFFADLVNS
FGSNANDVDKMMQEVLKYALYFLVVGAAIWASSWAEISCWMWTGERQTTKMRIKYLEAAL
NQDIQFFDTEVRTSDVVSAINTDAVMVQDAISEKLGNFIHYMATFASGFIVGFTAVWQLA
LVTLAVVPLIAVIGGIHTTTLSKLSNKSQESLSQAGNIVEQTVVQIRVVMAFVGETRVSQ
AYSSALKTAQRLGYKTGLAKGMGLGATYFVVFCCYALLLWYGGYLVRHRLTNGGLAISTM
FAVMIGGLALGQSAPSMAAFAKAKVAAAKIFRIIDHRPTIERNSESGVELDSVTGLVELR
NVDFSYPSRPDVKILNDFTLSVPAGKTIALVGSSGSGKSTVVSLIERFYDPASGQVLLDG
HDLKTLKLKWLRQQIGLVSQEPALFATSIRENILLGRPDADQVEIEEAARVANAYSFIIK
LPDGFDTQVGERGLQLSGGQKQRIAIARAMLKNPAILLLDEATSALDSESEKLVQEALDR
FMIGRTTLIIAHRLSTIRKADLVAVLQQGSVSEIGTHDELFAKGENGVYSKLIKMQEAAH
ETAMNNARKSSARQSSARNSVSSPIMTRNSSYGRSPYSRRLSDFSTTDFTLSIDASSYPN
YRHEKLPFKDQANSFLRLAKMNSPEWKYALLGSIGSVICGSLSAFFAYVLSAVLSIYYNP
NHEYMIKQIGKYCYLLIGLSSTALIFNTLQHSFWDIVGENLTKRVREKMFTAVLKNEMAW
FDQEENESARISARLALDANNVRSAIGDRISVIVQNTALMLVACTAGFVLQWRLALVLVA
VFPVVVAATVLQKMFMTGFSGDLEAAHAKGTQLAGEAIANVRTVAAFNSEAKIVRLYTAN
LEPPLKRCFWKGQIAGIGYGIAQFCLYASYALGLWYASWLVKHGISDFSKTIRVFMVLMV
SANGAAETLTLAPDFIKGGQAMRSVFELLDRKTEIEPDDPDTTPVPDRLRGEVELKHIDF
SYPSRPDIQVFRDLTLRARAGKTLALVGPSGCGKSSVISLVQRFYEPSSGRVMIDGKDIR
KYNLKALRKHIAIVPQEPCLFGTTIQENIAYGHECATEAEIIQAASLASAHKFISALPDG
YKTYVGERGVQLSGGQKQRIAIARALVRKAEIMLLDEATSALDAESERSVQEALDQACSG
RTSIVVAHRLSTIRNAHTIAVIDDGKVAEQGSHSQLLKNYPDGIYARMIQLQRFTHGQVI
GMTSGSSSRVKEDDA
NT seq
4008 nt
NT seq
+upstream
nt +downstream
nt
atgtcccaagaatctgttcagacagtagaagaagaagaaataaagtcagtggaggaacaa
tggcgtttgtccgaaatgcaagcacttgagtttctccctgaagcttcctccgacaacaac
aactcaagaaacccagtaacagagctccgggaacatccaccggaaatggaaaataacggt
gctcctccttctcctccggagccaaagaaagcagagatttgtggagttgcattcaaagag
ctattcagattcgcaggtgggttagattacgcgttgatggcaattggctccgttggtgct
ttcgtccacggctgctctttacccctgttcctcagattcttcgccgatctcgttaactcc
tttggctctaacgctaacgacgtcgacaagatgatgcaagaagtcctcaagtacgctctt
tacttcctcgtcgttggtgctgcgatctgggcttcctcctgggcagagatttcgtgttgg
atgtggactggagagagacaaacaacgaagatgaggattaagtacttagaagcagcttta
aaccaagacattcagttcttcgacactgaggttcgaacttccgatgttgtctccgccatc
aacaccgacgctgttatggtccaagatgccattagcgagaagttagggaacttcatccat
tacatggcgacgtttgcgtcgggattcatcgtgggtttcacggcggtgtggcaactagcg
ttagtgactctcgcggtggttccgttgatagctgtgatcggaggaatccacaccacaact
ctctctaagctctctaacaagagccaagagtctctttcacaagctggtaacatcgtcgaa
caaacagtggtgcaaatcagagtagtaatggcgtttgtcggagagacgagagtctctcaa
gcttactcatcagctctgaagacagctcagagactcggttacaaaacaggtttagctaaa
ggaatgggactcggtgctacttacttcgtcgtcttctgttgctacgctctcttgctttgg
tacggtggctatctcgttcgccatcgtttgaccaacggtggtctcgctatatccaccatg
ttcgccgtcatgatcggtggcttggcgttgggtcaatcagcaccgagcatggctgcgttt
gcgaaagctaaagttgctgctgcgaagatctttagaatcattgatcataggcctacgata
gagcgtaacagcgagagcggcgtggagctagactctgtcacgggtctcgtcgagcttaga
aacgttgacttttcgtacccgtcgaggccggatgttaagatccttaacgactttaccctc
tctgtccccgccgggaagactatagctttggttgggagcagcggttcgggcaaaagcact
gtcgtttcgcttatcgagaggttttacgacccggcatcagggcaagttttactagatggg
catgacttgaagacgctgaaacttaaatggttaaggcagcagatagggcttgtgagccaa
gagccagcactgtttgccacttctatcagagagaacatactcttgggccgtcctgacgct
gatcaagtggagatagaggaggctgctcgcgtggccaacgcttattcctttatcatcaaa
ctacctgatggcttcgacacacaggtaggggagagaggcttgcagctctcaggtgggcag
aaacaaagaatagccatagcaagagccatgttaaagaaccctgcgatacttctgctagac
gaggcgacaagtgcgttggattctgaatcagagaagctagtgcaagaagctttggatcgt
tttatgatcggaaggacgactctcatcattgctcatcgtctttccaccatacgcaaagcc
gaccttgttgctgtccttcagcaaggaagtgtctctgagattggaacgcacgacgagctt
tttgccaagggggagaatggtgtctactctaagcttatcaaaatgcaagaggcagctcac
gagaccgccatgaacaatgcaagaaagagtagcgcaagacagtcgagtgcaagaaactct
gtgagctcaccaataatgacccgaaactcttcatatggaagatcaccatactcacgtaga
ctctcagacttctcaactaccgacttcaccctctccattgacgcctcttcttacccgaac
tatcgacacgagaagctacccttcaaggaccaagccaactccttcttgcgcctagctaaa
atgaactcaccagagtggaaatacgctcttctaggctccataggctctgtcatctgcggc
tcgctcagcgcgtttttcgcatacgtcctaagcgcggtccttagcatctactacaacccc
aaccacgagtacatgatcaagcagataggtaagtactgttaccttttgatcggtctatcc
tcaacagcgcttatcttcaacacgctccagcattctttctgggacattgttggtgagaac
ctgaccaagagggtccgtgagaagatgtttacggcggtgcttaagaacgagatggcttgg
tttgatcaagaggagaatgagagtgcgagaatctcagcgaggttggcacttgatgcaaat
aacgtgaggtcagctataggagatagaatctcggtgattgtgcagaacacagctttgatg
cttgttgcttgtactgctggttttgttctgcaatggagactcgcattggtcttggtcgct
gtcttccctgtagttgttgctgcaactgtcttacagaaaatgttcatgactggcttctcc
ggagacttggaagcagcgcatgccaaggggacacagctcgctggtgaagccatagctaac
gtcaggacagtcgctgccttcaactcagaggcaaagatcgttcgtctttacaccgcaaac
ctcgagccgccactaaaacgctgcttctggaaaggacagatcgctggaattggctacggt
atagcacagttctgtctctacgcatcttacgctctagggctatggtacgcgtcgtggctt
gtgaaacacggcatctccgacttctccaaaaccataagagtcttcatggtccttatggtc
tcggccaacggtgcagcagagacgctcactttagctcctgatttcatcaaaggtgggcag
gctatgcggtcggttttcgagctcctagaccgaaaaaccgagatcgaaccggatgatcct
gataccaccccggttccagaccggttacgcggcgaggtggagctgaaacacattgacttc
tcttacccttctagaccagacatacaagtcttccgtgacctaaccctacgtgcgagagcc
ggcaagactctagctcttgtcggtccaagcgggtgcggcaaaagctcagtgatctccctt
gtacaaagattctacgagccgtcctcagggcgggtcatgatcgacggcaaagacataaga
aagtacaatctcaaagccctaaggaaacacatagccatagtccctcaagagccgtgccta
ttcggaacaactattcaagaaaacatagcgtacggacacgagtgcgccaccgaggcagag
atcatacaagcagcttcgctagccagcgcgcacaagttcatatccgcgttgcctgatgga
tacaagacgtacgttggcgagagaggcgttcagctctcgggagggcagaaacagaggatt
gctatcgcgcgtgccttggtgaggaaggcagagatcatgctgcttgatgaggccacgagt
gctcttgatgctgagtccgagaggtcggtgcaagaggcgttggaccaggcttgctctggt
agaacgtcgatcgttgtggctcataggttgtctacgataaggaatgctcacactattgct
gtgatcgatgatgggaaagtagcggagcaagggtcgcattctcagctgcttaagaactat
cctgatggaatttacgcgaggatgatacagttgcagagatttacgcatggtcaggtcatt
ggtatgacgtcagggtcgagttctagggttaaggaagatgatgcttag
DBGET
integrated database retrieval system
