Brassica oleracea (wild cabbage): 106342221
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Entry
106342221 CDS
T04124
Name
(RefSeq) SWI/SNF complex subunit SWI3A
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
boe
Brassica oleracea (wild cabbage)
Pathway
boe03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
106342221
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
boe03021
]
106342221
03036 Chromosome and associated proteins [BR:
boe03036
]
106342221
Transcription machinery [BR:
boe03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
106342221
Chromosome and associated proteins [BR:
boe03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
106342221
PBAF complex
106342221
GBAF(ncBAF) complex
106342221
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM
SWIRM-assoc_1
Myb_DNA-binding
Myb_DNA-bind_6
Zn_ribbon_2
Myb_DNA-bind_7
Motif
Other DBs
NCBI-GeneID:
106342221
NCBI-ProteinID:
XP_013636543
LinkDB
All DBs
Position
C4:complement(245501..247891)
Genome browser
AA seq
515 aa
AA seq
DB search
MEVTTDRSSSKDAELELYTIPAQSSWFVWDDIHEIERREFTEFFSESSITRTPKVYKEYR
DFIINKYREDTSRRLTFTSIRKYLIGDVNLLRKVFLFLEKWGLINFLQKNDDLVVEESEA
KIEQGTTPAGIRVTSTPNSTRPVIAPPLVEERAEPALTFPPLTSYSNVFKKPALFCAHCG
QPCPSHSAAFYEHNNKSNVNLCEKCFKNGDYGGNNSADDFKLSLSSATAAWTEEETLLLL
ESVLKHGDDWELVAQSVSTKSRLDCISKLIELPFGEFLMGSASGRLRSDEHLSSPSNLVE
EMKTDGQEHKETETREENEEDEPPAKRKRAAMMSDGDTSLMKQVAAMACKVGPSITTAAA
KAAIAALCDEASCPKDIFETTGDYKNSAADRSVGDRDTSDIEEQEEEKEGLEDLPVGLRM
RVSVATALGAAAAHAKILADQEEREMELLVASVIDQQLKKMKSKLKFLEQLEVIMDAEEK
VMEGAKDTILQERISVLQSAFSGGITKRWDHTYMK
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atggaagtgacgacagatcgaagcagcagcaaagacgcagagcttgagctctacaccatc
cctgctcaatccagttggttcgtatgggatgatatacacgaaatcgagagacgcgagttt
accgagttcttcagtgagagctctatcactcgaaccccaaaggtctacaaggagtaccga
gatttcatcatcaacaagtacagagaagacacctctcgcaggctcaccttcaccagcatc
cgcaagtacctcatcggcgatgtcaatttgctacggaaagtgtttctcttccttgaaaaa
tggggtttgattaatttcctccagaaaaatgatgatctggtggtggaggagagtgaagct
aagatcgaacaagggaccacccccgctgggattcgagttacttctacccctaattcgacg
aggcctgttatagcacctccccttgttgaggaaagagctgagcctgccctcacatttccc
ccattgacctcttattcaaatgttttcaagaagcctgcattgttttgtgcgcattgtgga
caaccttgtccttctcattctgctgctttctatgaacataacaacaagagtaatgtcaac
ttatgcgaaaaatgtttcaagaatggagactatggggggaacaattccgcagatgatttt
aagctgagtctgagttctgctacagctgcgtggaccgaggaagagaccctcctcttgctt
gaatctgtgctcaaacatggagacgattgggaactcgttgcacaaagtgtttctaccaag
tctagacttgactgtatctccaagctcattgagctcccgtttggagagtttctgatgggt
tctgcctccggaagactcagatcggatgaacacctttcgtctccatccaatcttgtggaa
gagatgaaaactgacggacaagaacacaaggaaacagagacgagggaagaaaacgaagaa
gacgagcctccagcaaaaaggaaacgtgctgcaatgatgtcagatggtgatacttcactt
atgaaacaggtcgcagcaatggcatgcaaagttggtccatctatcacaaccgctgctgca
aaagctgcaattgcagctctttgtgatgaagcctcttgtcctaaagatattttcgagaca
accggtgattacaaaaactctgcagctgacagatctgttggagacagagatacatcagat
attgaggaacaagaagaagagaaagaggggcttgaggacctacccgtaggtttaaggatg
agagtgtcagtggcaacagctcttggagctgcggctgctcacgcaaaaatactggctgat
caagaagaaagagagatggaattgttagttgcgagtgtaattgaccaacagctgaagaag
atgaagagcaagttgaagtttctggagcagttggaagtgataatggatgcagaagagaaa
gtgatggagggtgcaaaggatacaattctccaagagaggattagcgttttgcaaagcgcg
tttagtggcggtattaccaaacgttgggatcatacgtacatgaaataa
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