KEGG   Brassica oleracea (wild cabbage): 106342221
Entry
106342221         CDS       T04124                                 
Name
(RefSeq) SWI/SNF complex subunit SWI3A
  KO
K11649  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
boe  Brassica oleracea (wild cabbage)
Pathway
boe03082  ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:boe00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    106342221
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:boe03021]
    106342221
   03036 Chromosome and associated proteins [BR:boe03036]
    106342221
Transcription machinery [BR:boe03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    BAF/PBAF complex
     106342221
Chromosome and associated proteins [BR:boe03036]
 Eukaryotic type
  Chromatin remodeling factors
   BAF complex
    106342221
   PBAF complex
    106342221
   GBAF(ncBAF) complex
    106342221
SSDB
Motif
Pfam: SWIRM SWIRM-assoc_1 Myb_DNA-binding Myb_DNA-bind_6 Zn_ribbon_2 Myb_DNA-bind_7
Other DBs
NCBI-GeneID: 106342221
NCBI-ProteinID: XP_013636543
LinkDB
Position
C4:complement(245501..247891)
AA seq 515 aa
MEVTTDRSSSKDAELELYTIPAQSSWFVWDDIHEIERREFTEFFSESSITRTPKVYKEYR
DFIINKYREDTSRRLTFTSIRKYLIGDVNLLRKVFLFLEKWGLINFLQKNDDLVVEESEA
KIEQGTTPAGIRVTSTPNSTRPVIAPPLVEERAEPALTFPPLTSYSNVFKKPALFCAHCG
QPCPSHSAAFYEHNNKSNVNLCEKCFKNGDYGGNNSADDFKLSLSSATAAWTEEETLLLL
ESVLKHGDDWELVAQSVSTKSRLDCISKLIELPFGEFLMGSASGRLRSDEHLSSPSNLVE
EMKTDGQEHKETETREENEEDEPPAKRKRAAMMSDGDTSLMKQVAAMACKVGPSITTAAA
KAAIAALCDEASCPKDIFETTGDYKNSAADRSVGDRDTSDIEEQEEEKEGLEDLPVGLRM
RVSVATALGAAAAHAKILADQEEREMELLVASVIDQQLKKMKSKLKFLEQLEVIMDAEEK
VMEGAKDTILQERISVLQSAFSGGITKRWDHTYMK
NT seq 1548 nt   +upstreamnt  +downstreamnt
atggaagtgacgacagatcgaagcagcagcaaagacgcagagcttgagctctacaccatc
cctgctcaatccagttggttcgtatgggatgatatacacgaaatcgagagacgcgagttt
accgagttcttcagtgagagctctatcactcgaaccccaaaggtctacaaggagtaccga
gatttcatcatcaacaagtacagagaagacacctctcgcaggctcaccttcaccagcatc
cgcaagtacctcatcggcgatgtcaatttgctacggaaagtgtttctcttccttgaaaaa
tggggtttgattaatttcctccagaaaaatgatgatctggtggtggaggagagtgaagct
aagatcgaacaagggaccacccccgctgggattcgagttacttctacccctaattcgacg
aggcctgttatagcacctccccttgttgaggaaagagctgagcctgccctcacatttccc
ccattgacctcttattcaaatgttttcaagaagcctgcattgttttgtgcgcattgtgga
caaccttgtccttctcattctgctgctttctatgaacataacaacaagagtaatgtcaac
ttatgcgaaaaatgtttcaagaatggagactatggggggaacaattccgcagatgatttt
aagctgagtctgagttctgctacagctgcgtggaccgaggaagagaccctcctcttgctt
gaatctgtgctcaaacatggagacgattgggaactcgttgcacaaagtgtttctaccaag
tctagacttgactgtatctccaagctcattgagctcccgtttggagagtttctgatgggt
tctgcctccggaagactcagatcggatgaacacctttcgtctccatccaatcttgtggaa
gagatgaaaactgacggacaagaacacaaggaaacagagacgagggaagaaaacgaagaa
gacgagcctccagcaaaaaggaaacgtgctgcaatgatgtcagatggtgatacttcactt
atgaaacaggtcgcagcaatggcatgcaaagttggtccatctatcacaaccgctgctgca
aaagctgcaattgcagctctttgtgatgaagcctcttgtcctaaagatattttcgagaca
accggtgattacaaaaactctgcagctgacagatctgttggagacagagatacatcagat
attgaggaacaagaagaagagaaagaggggcttgaggacctacccgtaggtttaaggatg
agagtgtcagtggcaacagctcttggagctgcggctgctcacgcaaaaatactggctgat
caagaagaaagagagatggaattgttagttgcgagtgtaattgaccaacagctgaagaag
atgaagagcaagttgaagtttctggagcagttggaagtgataatggatgcagaagagaaa
gtgatggagggtgcaaaggatacaattctccaagagaggattagcgttttgcaaagcgcg
tttagtggcggtattaccaaacgttgggatcatacgtacatgaaataa

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