KEGG   Bordetella sp. J329: CBF45_13540
Entry
CBF45_13540       CDS       T05850                                 
Name
(GenBank) subtype I-F CRISPR-associated endonuclease Cas1
  KO
K15342  CRISP-associated protein Cas1
Organism
boj  Bordetella sp. J329
Brite
KEGG Orthology (KO) [BR:boj00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:boj03400]
    CBF45_13540
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:boj02048]
    CBF45_13540
DNA repair and recombination proteins [BR:boj03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    Other HR factor
     CBF45_13540
Prokaryotic defense system [BR:boj02048]
 CRISPR-Cas system
  Universal Cas proteins
   CBF45_13540
SSDB
Motif
Pfam: Cas_Cas1
Other DBs
NCBI-ProteinID: AZV94614
LinkDB
Position
complement(3056847..3057839)
AA seq 330 aa
MDDISASDLKTILHSKRANIYYLEHCRVLVNGGRVEYVTDAGKQQLYWNIPIANTTSILL
GTGTSVTQAAMRELAKAGVLVGFAGGGGTPLFSANEMDMAIAWFSPQSEYRPTEYLQAWV
QFWFDDALRLKAAKALQRKRIDRLYGAWQKRSLKEAGFDVASKRLETVLDRTRQQIEQAP
DTMALLTEEARLTKTLFKFAVDAVGYGDFSRAKHGSGTDPANRFLDHGNYLAYGLGATAT
WVLGLPHGLAVLHGKTRRGGLVFDVADLVKDAVILPQAFLSAMKGDSEQQFRRNCIEALT
RSESLDFMIDTVKEIALSTASAAAGNQGGA
NT seq 993 nt   +upstreamnt  +downstreamnt
atggacgatatttctgcatcagatttaaaaacgatcctgcactccaaacgagcgaatatc
tactatcttgaacattgccgggtgctggtgaatggcggacgtgttgaatatgtgacggat
gcgggtaagcaacagctctactggaatattcccattgcgaatacgaccagtattttgttg
ggaaccggaacctctgtgacacaggccgccatgcgggaactggccaaggcaggtgtgttg
gtcgggtttgcaggaggcgggggcacacccttattcagtgccaatgaaatggacatggct
attgcgtggttcagtccgcaaagcgaatatcggccgacggagtatttgcaggcttgggtg
caattctggtttgacgatgccttgcgtttgaaggcagcgaaagcgttgcagcgtaagcgt
atagatcgtttgtatggtgcctggcagaaacggtcgctcaaggaagccggtttcgatgtg
gcgagcaagcgtctggagactgtgctggatcggacacgacagcaaattgaacaggcgcca
gacacaatggccttattgaccgaagaggcccggttgaccaagacgctgttcaagttcgcg
gtggatgccgtgggctacggggatttcagccgcgccaagcatggttcgggaacggatcct
gccaaccggtttctcgatcatggcaattatttggcctatggactgggggcgaccgcaacc
tgggtgctgggcctgccgcatgggctggcggtcttgcatggcaagacgcgacgtgggggc
ctggtgtttgatgtggcagacctggtaaaggatgccgtgattttgccccaggcgtttttg
tcggccatgaaaggggacagcgagcaacagttcaggcgcaattgcattgaggcgttgacg
cgcagtgagtcgctggatttcatgattgatacggtcaaggaaattgcattgtcgacagcc
agtgctgccgcagggaatcagggtggcgcatga

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