Bordetella sp. J329: CBF45_16020
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Entry
CBF45_16020 CDS
T05850
Name
(GenBank) tRNA (uridine(54)-C5)-methyltransferase TrmA
KO
K00557
tRNA (uracil-5-)-methyltransferase [EC:
2.1.1.35
]
Organism
boj
Bordetella sp. J329
Brite
KEGG Orthology (KO) [BR:
boj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
boj03016
]
CBF45_16020
Enzymes [BR:
boj01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.35 tRNA (uracil54-C5)-methyltransferase
CBF45_16020
Transfer RNA biogenesis [BR:
boj03016
]
Prokaryotic type
tRNA modification factors
Methyltransferases
CBF45_16020
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_25
Methyltransf_31
Methyltransf_15
Methyltransf_4
Methyltransf_11
Methyltransf_12
Met_10
MTS
DREV
TRM
PrmA
Motif
Other DBs
NCBI-ProteinID:
AZV95037
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Position
3621134..3622222
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AA seq
362 aa
AA seq
DB search
MSHTYQESEYQSQLEAKRLRLAQLLAPFGAPAPDVHDSPRQHYRLRAEFHLWRDGDERRY
AMFAPGEGKRSPILLEQFPPANQHINALMPLLKQAWNSEPVLGERLFQVEFLTTLSGQAL
VTLCYHRKLDEAWTRAATALAAQLGVSLIGRSRGQRCVIGQDYVTETLAIRGRAFHYRQP
EGAFTQPNGTVNIKMIEWACVALGQRDDDLLELYCGNGNFTLPFATQVRRVLATEISKTS
VAAAQANIAANGIDNLVIARLSAEEFTQALNKVRAFQRLKDIDLDSYDFGTLFVDPPRAG
MDPDTCELARRFDRILYVSCNPETLAQNIAQLHDTHRITRCALFDQFPWTHHMESGVLLE
RR
NT seq
1089 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcacacttatcaagaatccgaataccagtcccagctagaagccaagcgcctgcgc
ctggcgcagctgctggctccgttcggcgcgcccgcgcccgacgtccatgactcgccgcgc
cagcactaccgcctgcgggccgagtttcacctctggcgtgacggcgacgagcgccgctac
gccatgttcgcgccaggcgaaggcaagcgttcgcctatcctgctggaacaattcccgcct
gccaaccagcacatcaacgccttgatgccgctgctcaaacaagcctggaacagcgaaccg
gtgctgggcgagcgcctgttccaggtcgaattcctcactacgctctcgggccaggcgctg
gtcaccctgtgctatcaccgcaagctcgacgaagcctggacgcgggccgccacagcactg
gcagcgcagttgggcgtgagcctcatcggccgttcgcggggacagcgttgcgtcatcggc
caggattacgtcaccgaaaccctggccatccgggggcgcgcatttcactaccggcaaccg
gaaggcgccttcacccagcccaacggcacggtcaatatcaagatgatcgaatgggcttgc
gtcgcgctggggcaacgcgatgacgacctgctggagctgtactgcggcaacggcaatttc
accctgcccttcgccacccaggtgcggcgcgtgctggccaccgaaatcagcaagacatcg
gttgcggcggcgcaagccaatatcgcagccaacggcatcgacaatcttgtcattgccagg
ctgtctgcggaagaattcacgcaggcgctcaacaaggtgcgcgccttccagcgcctcaag
gacatagacctcgacagctacgacttcggcacgctgttcgtcgacccgccacgcgccggc
atggacccggacacctgcgagctggcccgccgcttcgaccgtatcctttacgtatcctgc
aatccggaaaccctggcgcagaatatcgcgcagctgcacgacacccaccgcatcacgcgc
tgcgcgctgttcgaccagttcccctggacgcaccacatggaaagcggcgtgctgctggag
cggcgctaa
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