Bos mutus (wild yak): 102271523
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Entry
102271523 CDS
T02919
Symbol
PCF11
Name
(RefSeq) PCF11 cleavage and polyadenylation factor subunit
KO
K14400
pre-mRNA cleavage complex 2 protein Pcf11
Organism
bom
Bos mutus (wild yak)
Pathway
bom03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
bom00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
102271523 (PCF11)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bom03021
]
102271523 (PCF11)
03019 Messenger RNA biogenesis [BR:
bom03019
]
102271523 (PCF11)
Transcription machinery [BR:
bom03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
102271523 (PCF11)
Messenger RNA biogenesis [BR:
bom03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
102271523 (PCF11)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PCF11_RFEG_rpt
PCF11_charged
CFIA_Pcf11
SHOCT
Motif
Other DBs
NCBI-GeneID:
102271523
NCBI-ProteinID:
XP_005894699
LinkDB
All DBs
Position
Un
AA seq
1291 aa
AA seq
DB search
MAVKAPHQVPVQPEKSRPGPSLQIPDTKGTNRDPRLNRMSQHSSHGKDQSHRKEFLMNTL
NQSDIKTSKTVPSEKLNSSKQEKSKSGEKITKKELDQLDSKSKSKSKSPSPLKNKLSHTK
DLKNQEAESTRVSDMSKRDPRLKKHLQDKTDSKDDDTKDKRKTAEKKDKDEHMKSSEHRL
VGSRNKIINGIVQKQDTLTEESEKPGTKPGRSSTRKRSRSRSPKSRSPITHSPKRRDRRS
PKRRQRSMSPTSTPKAGKIRQSGVKQSHMEEFTPSREERSAKRSTKQDVRDPRRIKKTEE
ERPQETAGQHSTKSSTEPKENVENWPSSKSTKRWKSGWEENKSLQQGDEHSKAPHLRHRE
SWSSTKGILSPRAPKPQHRLSVDANLQIPKELTVASKRELLQKTSERLASGEITQDEFLV
VVHQIRQLFQYQEGVREEQRSPFNDRFPLKRPRYEDSDKPFVDSPASRFAGLDTNQRLTA
LAEDRPLYDGPSRPSVARDGPAKMIFEGPNKLSPRIDGPPAPGSLRFDGSPGQMGGGGPL
RFEGPQGQLGGGCPLRFEGPPGPVGTPLRFEGPIGQAGGGGFRFEGSPGLRFEGSAGGLR
FEGPGGQPVGGLRFEGHRGQPVGGLRFEGPHGQPVGGLRFENPRGQPVGGLRFEGGHGPS
GAAMRFDGPHGQPSGGIRFEGPLLQQGVGMRFEGPHGQSVAGMRFEGQHNQLGGNLRFEG
PHGQPGVGIRFEGPLVQQGGGMRFEGPSVPGGGLRIEGPLGQGGPRFEGCHPLRFEGQPG
QSSLLPRFDGLHGQPGPRFERTGQPGPQRFDGPPGQQVQPRFDGVPQRFEGPQHQQASRF
DIPLGLQGTRFDNHPSQRLESVSFNQTGPYNDPPGNAFNAPSQGLQFQRHEQMFDSPQGP
NFNGPHGPGNQSFSNPLNRASGHYFDEKNLQSSQFGNFGNLPAPITVGNIQASQQVLTGV
SQPVAFGQGQQFLPVHPQNPGAFVQNPSGALPKAYPDNHLSQVDVNELFSKLLKTGILKL
SQPDSATTQVNEVAAQPPAEEEEDQNEDQDVPDLTNFTIEELKQRYDSVINRLYTGIQCY
SCGMRFTTSQTDVYADHLDWHYRQNRTEKDVSRKVTHRRWYYSLTDWIEFEEIADLEERA
KSQFFEKVHEEVVLKTQEAAKEKEFQSVPAGPAGAVESCEICQEQFEQYWDEEEEEWHLK
NAIRVDGKIYHPSCYEDYQNTSSFDCTPSPSKTPVENPLNIMLNIVKNELQEPCESPKVK
EERTDTPPACTEESIATATEIKTENDTVESV
NT seq
3876 nt
NT seq
+upstream
nt +downstream
nt
atggcagttaaagctccccatcaggttcctgtgcagcctgagaaaagtcgtccaggtcca
tccttacaaattccagatacgaaaggaactaaccgggatccccgtcttaataggatgagt
caacattcttctcatggaaaagatcaaagtcacaggaaagaattcctaatgaacacactg
aaccaatctgatattaagacaagtaaaactgtaccctctgaaaaactaaattcatccaag
caagaaaaaagtaaatcaggtgaaaaaataaccaagaaagaacttgaccaattggattct
aaatccaaatctaaatctaaatcaccgtcacctttgaaaaataaattatcccacacaaaa
gacttgaaaaatcaagaagctgaaagtacaagggtgtctgatatgagcaagagagatcca
agattaaaaaaacatcttcaggataagactgatagcaaagatgatgatacaaaggacaag
agaaaaactgcagaaaaaaaggataaagatgagcacatgaaatcatctgaacacagactg
gtgggaagtagaaataaaatcataaatggcattgtacaaaaacaggatacactaacggaa
gaatcggaaaaaccggggacaaaaccagggagatcgagtactagaaagcgatcaagatca
cggtcacccaagtctcggtcaccaattacacattctcccaagagaagagacaggcggtca
cccaaacgaaggcaaaggagtatgtctccaacctcaacccccaaagctgggaagattcgc
cagtcaggagttaaacagtcacacatggaggagtttacaccttccagggaagaaagaagt
gcaaagagaagtactaaacaggatgttcgagatccaaggcggataaaaaagactgaagag
gaacgaccccaagagactgctggtcaacattctaccaagtcaagcactgaaccaaaggag
aatgtagaaaattggccaagttccaagtctaccaaaagatggaaatccggttgggaagaa
aataaaagtttacaacagggtgatgaacatagtaaagctcctcatctaaggcatagggag
agctggtcaagcactaaaggaatcttgtcacctcgagccccaaagccgcagcatcgatta
agtgtagatgccaatcttcagattcctaaagagttaactgttgcaagcaaaagagaatta
cttcaaaagacgagtgaacgtttagcatctggtgaaattacacaggatgagttccttgtt
gttgtgcatcaaatacgacagctatttcagtatcaagaaggtgtacgagaagagcagaga
tcaccattcaatgatcgttttccacttaaacgacctagatatgaagattcagataaacca
tttgtagatagccctgcatcaagattcgccggccttgatacaaatcagcgacttacggct
ttagctgaagatagaccgttatacgatggacctagcaggccatcagtagcgagagatggc
ccagccaagatgatttttgaaggacctaataaattaagccctagaattgatggacctcct
gcaccaggttctcttcggtttgatgggtcaccaggacagatggggggaggtggccctttg
agatttgaaggaccacaaggccagttaggaggtggatgtcctttgagatttgaaggtcct
ccaggaccagtcgggacacctctgcgatttgaggggccgattggtcaagcaggaggaggt
ggcttccgatttgaaggttcccctggtctgaggtttgagggatctgcaggtggtttgcga
tttgaaggaccagggggccagcctgtgggcggtctcaggtttgaaggacatcggggtcaa
cctgtgggtggtctgaggtttgagggacctcatggtcagcctgtgggtggacttcgattt
gagaatcctcgaggtcagccagtaggtggacttagatttgagggaggtcatggtccatca
ggggctgcaatgaggtttgatggacctcatggtcagccatcaggtgggatcagatttgag
ggcccattgttacagcagggagttggaatgaggtttgagggcccccatggtcagtcagta
gctggtatgaggtttgaaggacaacataatcagcttggtgggaaccttaggtttgagggt
ccacatggtcaaccaggggttgggatcaggtttgaaggacctttagtccaacaaggaggt
ggaatgaggtttgagggtccttcggtcccaggaggtggcctgagaatcgaaggacctctg
ggtcaaggcggtccgaggtttgaaggttgtcatcctttaaggtttgaagggcagccaggt
cagtcatcactcctgccaagatttgatggattacacggtcagccaggtcctagatttgaa
agaactggtcagccaggcccacagaggtttgatggacctcctggacagcaggttcaacca
agattcgatggtgtgcctcagagatttgaaggaccacaacaccagcaagcatcaaggttt
gatattcctcttggtcttcaaggcacacgatttgacaatcatccttcacagaggcttgaa
tcagtatctttcaatcagactggcccatataatgatccacctggcaatgcttttaatgcc
ccatcccaaggactacagttccaaagacacgaacaaatgtttgactcacctcaaggacca
aatttcaatggaccacatggccctggaaaccagagtttttccaatccccttaacagagct
tctggacactattttgatgagaagaatcttcagagttctcaatttggaaactttggcaat
ttacctgctccaataacagtaggaaatattcaggcatctcaacaggttctgactggtgtt
tctcagccagtagcatttggccaaggacagcaatttttgccagttcatccacaaaatcct
ggagcatttgttcagaatccttcaggagccctgcctaaggcttatcctgataatcatctc
agtcaggtggatgtaaatgaattattttcaaaactgctaaaaacaggaattctcaaattg
tcccagcctgattcagctacaacacaagtaaatgaagttgctgctcagccccctgctgag
gaggaggaagatcaaaatgaagatcaagatgttccagatcttaccaattttacaattgaa
gaattaaaacaacgttatgatagtgttataaatcgactgtacactggtattcagtgttat
tcctgtggaatgaggtttacaacatcacagacagatgtatacgcagatcacttggactgg
cattatcgacaaaatagaactgaaaaagatgtaagcagaaaagtcactcacaggcgttgg
tactacagtttaacagactggatagaatttgaggaaatagctgatctcgaagaacgtgca
aagagccagttttttgaaaaggtacacgaagaagttgtactcaaaactcaggaggctgca
aaagaaaaggagttccaaagtgtaccggctggaccagcaggagcagtcgagagttgtgaa
atctgtcaagagcaatttgaacagtactgggatgaagaggaggaggaatggcatttaaaa
aatgctattagagtagatggaaagatttatcatccatcatgttatgaagattatcaaaat
acatcttcatttgattgtacaccatctcccagcaagacaccagttgaaaatcccttgaac
attatgttgaacattgtcaaaaacgaattgcaggaaccctgtgaaagtcccaaagttaag
gaagaacgaactgatactccaccagcttgcacagaggaaagcatagcaacagccactgaa
attaaaacagaaaatgatacagtcgagtcagtttaa
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integrated database retrieval system
