Bos mutus (wild yak): 102286064
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Entry
102286064 CDS
T02919
Symbol
UPF3A
Name
(RefSeq) UPF3 regulator of nonsense transcripts homolog A (yeast)
KO
K14328
regulator of nonsense transcripts 3
Organism
bom
Bos mutus (wild yak)
Pathway
bom03013
Nucleocytoplasmic transport
bom03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
bom00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
102286064 (UPF3A)
03015 mRNA surveillance pathway
102286064 (UPF3A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bom03019
]
102286064 (UPF3A)
Messenger RNA biogenesis [BR:
bom03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
102286064 (UPF3A)
mRNA cycle factors
P-body specific factors
102286064 (UPF3A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Smg4_UPF3
Motif
Other DBs
NCBI-GeneID:
102286064
NCBI-ProteinID:
XP_005909457
LinkDB
All DBs
Position
Un
AA seq
444 aa
AA seq
DB search
VVIRRLPPSLTKEQLEQQLHPLPAHDYFEFFTADVSLYPHLYSRAYINFRNPDDILLFRD
RFDGYIFIDSKGLEYPAVVEFAPFQKIAKKKLKKKDAKTGSIEDDPEYKKFLETYCVEEE
KTSVSPETLLGDIEAKTRELIARRTTPLLEYIKNRKLEKQRIREEKREERRRRELEKKRL
REEEKRRRREEEKCRRKAAEKQKKTAEKEVRMKLLKKPEKGEEPSTEKQKERAEETDPGD
GKWEPCPSAVVLKPKPPEGSLEELRERSQNDSDKEQRDKERRSREKELEAQQCHLDDSRK
HRAHHELEKCSGRNGEELARGKGSAADGGRRGSQDRGCPVEAAERPGREKSEDRPAPRKE
RTGNKDRPGLQLYQPRARIRACDCDGRHPEEGRDGRRGEAEDSTVALAEKSEEAVWGDMH
VGDVGGGSPPQRSVGSRGRSFRKL
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
gtggtcatccggcggcttccccccagcctcaccaaggagcagctggaacagcagctgcac
ccgctgcctgcacacgattatttcgagttctttactgctgatgtcagtctttatcctcat
ctctactcaagagcatacattaactttagaaatccagatgacatccttctttttagagat
cgttttgatggatatatcttcattgatagtaaagggctagaatatcctgcagtggtagaa
tttgctccattccagaagatagccaaaaagaagctaaagaaaaaagatgccaaaaccgga
agcattgaagatgacccagagtataagaaatttttagaaacttactgtgtggaggaggag
aaaactagtgtcagtcctgaaactcttctgggagacatagaggcaaagacacgagaactt
attgctagaagaaccacacctctcttggaatatattaagaacagaaaattagagaagcag
cgaattcgagaagaaaaacgagaggagcggaggaggagggagctggaaaagaagcgccta
cgggaagaagagaagcggaggcggcgggaggaggagaagtgcaggaggaaagcagcagaa
aaacagaagaaaacggcggagaaggaagtaaggatgaagcttctcaaaaaaccagaaaag
ggagaggagccgagcactgagaaacaaaaagaaagagcggaggagactgaccctggagac
gggaagtgggagccttgtcccagtgcggtggtcctaaagcccaagcccccagagggctcg
ctggaggagctccgggagaggtcacaaaatgacagtgataaagagcaaagggataaggag
agaagatcccgagaaaaagaacttgaagcacagcaatgccacttggatgacagcaggaaa
cacagagcccaccatgagctggaaaaatgttcgggaagaaatggagaagagctggcacgg
gggaaggggtcggccgcagacggagggagaagagggagccaggataggggctgccctgtg
gaagcagcagagaggccgggaagggagaagagtgaagaccggccggcacccagaaaggag
cgcacgggaaacaaggaccggccaggcttgcagctgtaccagcccagagctcgcatccga
gcctgtgactgtgatggaagacaccctgaggagggccgcgacgggaggaggggtgaggcg
gaagactcaacggtggctttagctgagaagagcgaagaggcggtgtggggcgacatgcat
gttggtgacgtgggtgggggctccccacctcaacgctctgtgggttcgagagggcgttcc
ttccggaagttataa
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