Cytobacillus oceanisediminis: A361_00695
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Entry
A361_00695 CDS
T04330
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
bon
Cytobacillus oceanisediminis
Pathway
bon03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
bon00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
A361_00695
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bon03021
]
A361_00695
03400 DNA repair and recombination proteins [BR:
bon03400
]
A361_00695
Enzymes [BR:
bon01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
A361_00695
Transcription machinery [BR:
bon03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
A361_00695
DNA repair and recombination proteins [BR:
bon03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
A361_00695
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_2
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
Motif
Other DBs
NCBI-ProteinID:
AND37748
UniProt:
A0A160M745
LinkDB
All DBs
Position
130872..134426
Genome browser
AA seq
1184 aa
AA seq
DB search
MTGQLVQYGRHRQRRSYARISEVLELPNLIEIQTSSYQWFLDEGLREMFHDISPIEDFTG
NLSLEFIDYSLGEPKYSVEESKERDVTYSAPLRVKVRLVNKETGEVKDQDVFMGDFPLMT
ETGTFVINGAERVIVSQLVRSPSVYFSGKLDKNGKKGFTATVIPNRGAWLEYETDAKDVV
YVRIDRTRKLPVTVLLRALGFGSDQEIIDLIGDNEYIRNTLEKDNTESTEKALLEIYERL
RPGEPPTVENAKSLLVSRFFDPKRYDLANVGRYKINKKLHIKNRLFGQKLAETLVDPETG
EIIAEKGVTLDRRTLDRILPNLEKDIGFKTVSLLGGVVDDEVLLQSIKIYAPNEDGEKVI
NVIGNAYVEEAVKNISPSDIIASISYFFNLLHSVGDTDDIDHLGNRRLRSVGELLQNQFR
IGLSRMERVVRERMSIQDTNTITPQQLINIRPVIASIKEFFGSSQLSQFMDQTNPLAELT
HKRRLSALGPGGLTRERAGFEVRDVHYSHYGRMCPIETPEGPNIGLINSLSSFAKVNRFG
FIETPYRRIDPETGKVTSRIDYLTADEEDNYVVAQANALLGDDGSFLDEEVVARFKGENT
VVKRDRVDYMDVSPKQVVSAATACIPFLENDDSNRALMGANMQRQAVPLMQPEAPRVGTG
MEYVSGKDSGAAVICKHEGIVEHVEAREVWVRRIQNVDGQEVKGDLDKYRMLKFIRSNQG
TCYNQRPIVAVGNRVTKGEILADGPSMELGELALGRNVLVAFMTWDGYNYEDAIIMSERL
VKDDVYTSIHIEEYESESRDTKLGPEEITRDIPNVGEDALRNLDERGIIRTGAEVKDGDL
LVGKVTPKGVTELTAEERLLHAIFGEKAREVRDTSLRVPHGGGGIVLDVKVFNREDGDEL
PPGVNQLVRVYIVQKRKISEGDKMAGRHGNKGVISRILPEEDMPYLPDGTPVDIMLNPLG
VPSRMNIGQVLELHLGMAARALGIHVASPVFDGAREEDVWATIEEAGMARDAKTVLYDGR
SGEPFDNRVSVGVMYMIKLAHMVDDKLHARSTGPYSLVTQQPLGGKAQFGGQRFGEMEVW
ALEAYGAAYTLQEILTVKSDDVVGRVKTYESIVKGENVPEPGVPESFKVLIKELQSLGMD
VKILSGDEEEIEMRDLEDEDDVQQAESLTIAPETQNEEQVVTKE
NT seq
3555 nt
NT seq
+upstream
nt +downstream
nt
ttgacaggtcaactagttcagtatggacgacaccgccaacgtagaagttacgcacgaatc
agtgaagttttagaattaccaaatctaatcgaaatccaaacctcttcttatcaatggttt
cttgatgagggtttacgagaaatgttccatgatatttctccgattgaagactttactggt
aatttgtcgcttgaatttattgattacagccttggcgaaccaaaatattccgttgaggaa
tcgaaagaacgagatgttacatattctgcacctttacgtgtgaaagtgcgtcttgtaaac
aaagaaacaggcgaagttaaagaccaggatgtctttatgggtgacttcccgcttatgaca
gagacaggtacgttcgttattaacggagcggaacgtgtcattgtatcccagttagtacgt
tcaccgagcgtatatttcagtggaaagcttgataaaaacgggaaaaaaggctttacagca
accgtaatcccgaaccgcggcgcttggcttgagtatgaaacagatgccaaagacgtcgta
tacgtcagaatagatcgtactcggaaactgcccgttacggttcttttgcgtgcacttggg
ttcggctctgatcaagagatcatcgatttgattggagacaacgagtacattcgcaacact
cttgaaaaagataatactgaaagtacagagaaagcgctgcttgaaatttatgagcgcctt
cgtccgggcgaaccgccaacggttgaaaatgcgaaaagcttgcttgtctcaaggtttttc
gatccaaagcgctatgacctggcgaatgttggacgctataagatcaataagaagcttcat
atcaaaaatcgcctgttcggtcaaaaactggctgaaacgcttgtggatccagaaactggc
gaaatcattgcggaaaaaggcgttacgcttgaccgccgcactttagaccggatccttcct
aacctggagaaggatatcggctttaaaaccgtaagccttttaggcggagttgtagatgat
gaagtgctgcttcagtctattaagatttacgcgcctaatgaagatggcgaaaaagtcatc
aatgtaattggcaatgcttatgttgaagaagcagtgaaaaacatttcaccttctgacatc
attgcttcaatcagttatttctttaaccttctgcactctgtaggagatacagatgatatc
gaccatcttggaaacagacgtcttcgttcagtcggagaactattgcagaaccagttccgc
atcggtctttcccgtatggagcgtgtggtccgcgagagaatgtccatccaggatacaaat
accattacgcctcagcagctgattaatatccgtcctgttattgcgtcaattaaagagttc
tttggaagctcgcagttgtcccagttcatggaccagacaaatccgctcgctgaactgaca
cataaacgccgtctttctgcgttaggacctggtggtctgacacgtgaacgtgccggcttc
gaagtacgtgacgttcactactctcactatggccgtatgtgtccgattgaaacgccggag
ggaccaaacatcggtttgattaactccttatcttcatttgcgaaggtaaaccgtttcgga
tttatcgaaacaccgtatcgccgaattgaccctgagaccggaaaagttacatcccgcatc
gactatctgacagctgatgaagaggataactatgtagtggcccaggcgaatgcacttctt
ggtgacgatggctcattccttgacgaagaagtagttgcccgtttcaaaggtgaaaacaca
gttgtgaagcgagaccgtgttgactacatggatgtatcgcctaaacaggtagtttctgct
gcgacggcatgtatcccattcctggaaaacgatgactccaaccgtgccctgatgggagcg
aacatgcagcgtcaggctgtgcctttgatgcagccggaagcgccaagagttggtactggt
atggaatatgtatcaggtaaagactcaggtgctgcagtcatctgtaagcatgaggggatc
gttgagcacgtagaagctcgcgaagtttgggttcgccgcattcaaaacgtggatggccag
gaagttaaaggcgatcttgataaatacagaatgcttaaattcatccgttccaaccaggga
acttgctacaaccagcgcccaatcgttgctgtaggcaaccgtgtaactaaaggagaaatc
cttgctgacggaccttccatggaacttggtgaattagcgcttggacgcaacgttctcgtc
gcgtttatgacatgggatggatataactacgaggatgcgatcattatgagtgagcgcctc
gtaaaagatgatgtttatacatctatccatattgaagaatatgaatcagaatcacgcgat
acaaagcttggacctgaagagatcacaagagatatccctaacgttggggaagatgcactg
cgcaatctggacgaacgcggaattatccgcacaggtgcggaagtaaaagatggcgacctt
cttgttggtaaagtaactcctaaaggggtaacggaactaacagctgaagaacggctattg
cacgcaatctttggtgaaaaagctcgtgaagtccgcgatacttcccttcgtgtgccacac
ggcggcggcggtatcgtactcgatgttaaagtatttaacagagaagatggagatgagctt
cctccaggtgttaaccagcttgtgcgtgtatatatcgttcagaagcgtaaaatctctgaa
ggtgacaagatggccggacgccacggtaacaaaggtgttatctcccgtattttaccggaa
gaagacatgccttacctgccggatggcaccccagtagacatcatgttaaaccctctcggg
gttccatcgcgtatgaacatcggacaggtgcttgagcttcaccttggtatggctgccaga
gcattgggcattcacgtagcatctcctgtatttgatggtgcccgcgaggaagatgtatgg
gcaacgatcgaagaagcaggcatggcgcgtgatgctaagactgtcctttatgatggacgt
tcaggcgagccgtttgacaatcgcgtatcagtaggagtcatgtatatgatcaaactggcg
cacatggttgacgataagctccatgcccgttcaacaggaccttactctcttgttacgcag
cagccattgggcggtaaagctcagtttggcggacagcgtttcggtgagatggaggtttgg
gcacttgaagcatatggtgctgcctatacacttcaggaaatcttaacggttaagtccgat
gacgtcgttggacgtgttaagacttacgaatcaatcgtcaaaggcgagaatgttcctgaa
ccgggcgtaccggaatcattcaaggtactaatcaaagaacttcaaagtttaggtatggat
gttaagatcctttctggcgatgaagaagaaattgaaatgcgcgacctggaagatgaagat
gatgttcagcaggctgaatcattgacaatcgctccggaaacgcaaaatgaagaacaggta
gttacgaaagaataa
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integrated database retrieval system