Cytobacillus oceanisediminis: A361_00700
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Entry
A361_00700 CDS
T04330
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
bon
Cytobacillus oceanisediminis
Pathway
bon03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
bon00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
A361_00700
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bon03021
]
A361_00700
03400 DNA repair and recombination proteins [BR:
bon03400
]
A361_00700
Enzymes [BR:
bon01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
A361_00700
Transcription machinery [BR:
bon03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
A361_00700
DNA repair and recombination proteins [BR:
bon03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
A361_00700
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Peptidase_M23
Motif
Other DBs
NCBI-ProteinID:
AND37749
UniProt:
A0A160M5T3
LinkDB
All DBs
Position
134557..138156
Genome browser
AA seq
1199 aa
AA seq
DB search
MLDVNNFEYMKIGLASPDKIRSWSHGEVKKPETINYRTLKPEKDGLFCERIFGPTKDWEC
HCGKYKRVRYKGVVCDRCGVEVTRAKVRRERMGHIELAAPVSHIWYFKGIPSRMGLVLDM
SPRALEEVIYFASYVVTDPGDTALEKKQLLSEKEYRAYREKYGNKFQASMGAESIKKLLS
DIDLNKEVDTLKEELKTAQGQRRTRAIKRLEVLEAFRGSGNEPSWMILDVLPVIPPELRP
MVQLDGGRFATSDLNDLYRRVINRNNRLKRLLDLGAPSIIVQNEKRMLQEAVDALIDNGR
RGRPVTGPGNRPLKSLSHMLKGKQGRFRQNLLGKRVDYSGRSVIVVGPNLKMYQCGLPKE
MALELFKPFVMKELVEKGLAHNIKSAKRKIERVQPEVWDVLESVIKEHPVLLNRAPTLHR
LGIQAFEPTLVEGRAIRLHPLVCTAYNADFDGDQMAVHVPLSAEAQAEARLLMLAAQNIL
NPKDGKPVVTPSQDMVLGNYYLTLERAGAVGEGMIFNDTSEALLAYQNGYVHLHTRVAVH
AGSLNNQTFTEEQNKKLLLTTVGKLVFNEILPETFPYINEPTKENLEIETPEKYFVEPAT
DVAAVIKEMPLVDPFKKKILGNIIAEVFKRFKITETSKMLDRMKNLGFRYSTKAGITVGV
ADIVVLGEKQEIIHEAQSKVDNVMKQFRRGLITEDERYDRVISIWSAAKDNIQAKLMKSL
DKSNPIFMMSDSGARGNASNFTQLAGMRGLMANPAGRIIELPIKSSFREGLTVLEYFIST
HGARKGLADTALKTADSGYLTRRLVDVAQDVIVRDDDCGTDRGLLIASLKDGTEVIEALE
ERLIGRYARRNIKHPETNEVIVAENGLITEDIAVEIVSAGIEKVWIRSAFTCNTRHGVCK
KCYGRNLATGQEVEVGEAVGIIAAQSIGEPGTQLTMRTFHTGGVAGDDITQGLPRIQEIF
EARNPKGQAVISEIDGVVVGINEGRDRQHEIVVQGEVESKTYTAPYTARLKVAVNDEVVR
GQELTEGSIDPKELIKVKDVTAVQEYLLREVQKVYRMQGVEIGDKHIEVMVRQMLRKVRV
IDAAETDVLPGTLLDIHQFTDANEKALLAGKMPATGRPVLLGITKASLETDSFLSAASFQ
ETTRVLTDAAIKGKRDELLGLKENVIIGKLVPAGTGMQRYRRAEPYTNEETAENTVTVE
NT seq
3600 nt
NT seq
+upstream
nt +downstream
nt
ttgctagatgtaaataatttcgagtatatgaaaataggtcttgcttcaccggataagata
cgttcttggtcacatggtgaggttaagaagcctgaaacgatcaactatcgtacattaaaa
ccagaaaaagacggtttattctgcgaacgcattttcggaccgacaaaagactgggaatgt
cactgcggaaagtataagcgtgttcgatacaaaggcgttgtctgtgatcgatgcggcgtt
gaagtaacacgtgcaaaagtgcgccgtgaaagaatgggccacattgaacttgcagcccct
gtatcccacatttggtacttcaaaggcatcccaagccgtatgggtcttgtgctggacatg
tctccgcgtgcacttgaggaagttatttacttcgcttcttatgttgtaacggatcctggc
gatacggctcttgaaaagaagcagctgctttccgaaaaagaataccgtgcataccgtgaa
aagtatggaaacaagttccaggcatccatgggtgctgaatccattaagaaacttctttct
gacatagacctcaacaaagaagtagatacccttaaagaggaactgaaaactgcccagggc
cagcgacgcactcgtgctatcaagcgcctggaagttcttgaagctttccgtggctccgga
aatgaaccatcctggatgattcttgacgttcttccggttattcctccggaacttcgtccg
atggtacagctggatggcggacgttttgccacttccgacttaaatgatctgtaccgccgt
gtaatcaaccgcaacaaccgcctaaagcgtctattggaccttggtgctccaagcattatt
gttcaaaacgaaaagcgcatgcttcaggaagcagtagatgcgctaatcgataacggccgc
cgcggaagaccggtaacaggaccaggaaaccgtccgttaaaatccctgtcgcatatgctt
aaagggaagcagggacgtttccgccaaaacttgcttggtaagcgtgttgactattctgga
cgatcggttatcgtcgtaggaccaaacttaaaaatgtaccagtgcggacttccgaaagaa
atggcattggaattattcaagccattcgttatgaaggaattggtggaaaaaggcttagcc
cacaacatcaagtctgcaaaacgcaagatcgaaagagtgcagccggaagtttgggatgtt
cttgaaagtgtcattaaagagcaccctgtattgcttaaccgtgccccaactcttcacaga
ctgggcattcaggcatttgaaccgacattggtggaaggacgcgctattcgtcttcatccg
cttgtgtgtactgcatacaacgcagactttgacggtgaccaaatggctgttcacgtgccg
ctttcagcagaagcacaggcagaagcccgcctgctgatgcttgcagcacagaacatcctg
aacccgaaagacggtaagccagttgttactccttcacaggatatggtattaggtaactat
tacttgacacttgaaagagccggcgctgtcggagaaggcatgatcttcaatgatacaagt
gaagcactgcttgcctatcagaacggctatgttcatttgcatacaagagtagctgtccat
gctggatccttgaataaccagacattcaccgaagaacaaaataaaaagcttttattaact
acggttggtaagcttgttttcaacgagattctgcctgagacattcccatacatcaacgag
cctacaaaagaaaaccttgagattgaaactcctgagaaatactttgtagagcctgctact
gatgtagctgctgttatcaaggaaatgcctctagtagatccgtttaagaaaaagatcctt
ggaaacatcattgcggaagtcttcaaacgctttaaaatcactgaaacgtctaaaatgctt
gaccgcatgaaaaatcttggattcagatactccacaaaagccggcatcacggttggtgta
gctgacatcgtggtattgggcgagaagcaggaaattatccacgaagcacaaagcaaggtt
gataatgtcatgaaacagttcagacgcggtcttattaccgaagatgagcgttatgatcgt
gttatttcaatctggagtgcagcgaaggataatatccaggcaaaattgatgaagtcattg
gataaatccaacccaatcttcatgatgagtgactccggtgcccgtggtaacgcatccaac
ttcactcagttagctggtatgcgcggactcatggccaacccggctggacgtatcattgaa
ttaccgattaaatcaagtttccgtgaaggtttaacagtactcgagtactttatttctaca
cacggtgcccgtaaaggacttgccgatacagcccttaaaacagctgactcaggttacctg
actcgccgtctggtagacgtagcacaggatgtcatcgttcgtgatgatgattgtggaact
gaccgcggattgctgatcgcatctcttaaagatggtactgaagttattgaagcgcttgaa
gagcgtctgattggccgttatgcaagaagaaatatcaaacatcctgagacaaatgaagtg
attgtagctgaaaacggattgatcactgaagatattgcagttgaaattgtttcagccggc
atcgaaaaagtatggatccgttccgcgttcacatgcaacacacgtcatggggtttgtaaa
aagtgctacggccgcaacctggcaaccggacaagaggttgaagttggtgaagcagtaggt
atcatcgctgcccaatccatcggtgaaccaggtacacagttaacaatgcgtacgttccat
accggtggggtagcaggagacgatatcactcaaggtttaccgcgtatccaggaaatcttc
gaagcgcgtaaccctaaaggtcaggcagtcatttctgaaattgatggtgtggtagttggc
atcaatgaaggccgtgaccgccagcatgagattgttgttcagggtgaagtggagtccaag
acgtatacagcaccttatacagcccgcttaaaagtagctgtaaacgatgaagtagtacgt
ggacaggaattgactgaaggttctattgaccctaaagagttaattaaagtaaaagatgta
acagctgttcaagaatacttgctgcgtgaagttcagaaggtataccgcatgcagggtgtt
gaaattggcgataagcacatcgaggtaatggtacgccagatgcttcgcaaagtgcgtgta
attgatgcagcagaaacagatgtactgccaggtactctgcttgatatccatcaatttaca
gatgccaacgaaaaagcccttcttgctggcaaaatgcctgcaacaggacgtccggttctg
cttggtatcacaaaagcatctcttgaaacagattcattcttatcagcagcatccttccag
gagaccacaagagttcttaccgatgcagcgattaaaggcaagcgcgatgagcttcttggc
ctgaaagagaatgtaattattggtaagcttgtccctgccggaacaggaatgcagcgctat
agaagagcagagccttatacaaatgaggaaactgctgaaaatactgttactgtagaataa
DBGET
integrated database retrieval system
