Cytobacillus oceanisediminis: A361_16210
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Entry
A361_16210 CDS
T04330
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
bon
Cytobacillus oceanisediminis
Brite
KEGG Orthology (KO) [BR:
bon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bon03000
]
A361_16210
Transcription factors [BR:
bon03000
]
Prokaryotic type
Helix-turn-helix
Other families
A361_16210
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
HTH_8
GAF
AAA_5
AAA_2
AAA
Mg_chelatase
HTH_30
AAA_3
HTH_23
AAA_16
HTH_28
HTH_50
HTH_29
Motif
Other DBs
NCBI-ProteinID:
AND40630
UniProt:
A0A160MCH3
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Position
complement(3222776..3224659)
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AA seq
627 aa
AA seq
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MDTTFYFDTWKRFVHEGVLDQSRLDKRILESWYRCKKERVNPYLNKGMHLLTEEELHNKK
AQNSLLIEMTDPYLKKMEPMIKSSGMMALLVDPDGYVLSLLGNEKTLMDASRINFMEGVS
WTEGAVGTNAIGTALATKEAVMIQGPEHYSVASHQWSCSATPIMDDHGRLLGLIDVSCPV
EQSHPFMIGMVTSIAYAIEKELIKRSHRKEITMVRQASQLAESHHSQLFIVCNQHKQIIS
ASKPVREKIPQVIGMNLQELLHNRYRIKSEMPFYTKEDNCMNGICLFLSEVNVPHQKACF
LPSRPEDSFVFNGECGVSEIFQNTLKKVKLVAPTDATVFISGETGTGKELIARAIHDNSP
RKNGPFISLNCGAIPKDLMESELFGYAEGAFTGAKRQGNKGKFEQAQRGTIFLDEIGEIP
HTMQVALLRVLQERKVTPIGGTKEVPLDVRIITATHRDITDLVKRREFREDLYYRLNVYP
IDVPPLRNRKEDIPHLIKHICQKNNWSIGSLDIQDLITRLSDYDWPGNIRELTNLIERLH
IMLPEQQSDYTILEQPSELLNLNYSSASANPFEEDKVEETSLNTREKIQRDLMLDALKRT
NGNVTAAAKFLGIPRSTFYKRLKKFGM
NT seq
1884 nt
NT seq
+upstream
nt +downstream
nt
atggatactactttttattttgatacttggaagcgatttgttcatgaaggtgttcttgac
caatcacgattagacaaacgaattttggaatcctggtaccgatgtaaaaaagaaagagta
aacccatatttgaataaaggcatgcatttattaactgaagaggaattacataataagaaa
gctcaaaattcactgcttattgaaatgactgacccgtatttaaaaaagatggaaccgatg
ataaaaagttctggcatgatggcattattggtcgatcctgatggatatgtattatcccta
ttagggaatgaaaaaaccttaatggatgccagcagaattaactttatggaaggcgtaagc
tggactgagggcgctgtcgggaccaatgcaatcggaacggcattggcaacaaaagaagca
gtcatgattcagggccctgagcattattctgtagcttctcatcaatggagctgctctgcc
actcccattatggacgaccatggaagattacttggactcatcgatgtttcatgtcccgta
gagcaatctcacccttttatgattggcatggttacttccattgcttatgcgattgaaaaa
gaattaattaagagatcccacagaaaagaaatcacaatggtccggcaagcatctcaatta
gctgagtcccatcacagccagctcttcattgtatgtaatcagcacaaacaaatcatatcc
gcgagtaaacccgtccgtgagaaaataccgcaggtcattggaatgaatctgcaggaatta
ctgcataacagataccggatcaagtctgaaatgcctttctatacaaaggaagacaactgt
atgaatggaatctgccttttcctgtcagaagtgaatgtgcctcatcaaaaagcttgcttc
ctcccctcaagaccagaagactcctttgtatttaatggggaatgtggagtaagtgagatt
ttccagaacactttaaagaaagtaaaactcgttgctccaacagatgctaccgtatttatc
tcaggggaaacgggtacaggcaaagagttgattgcaagggccattcacgataacagccct
cgcaaaaacggcccttttatctcgttgaattgcggcgctattcctaaagacctgatggaa
agtgaactctttgggtatgcagaaggggcttttaccggggcaaaacgtcaaggaaataaa
gggaaatttgaacaggctcaaagggggacgatttttcttgatgaaattggtgaaattcct
cacacgatgcaggtagctttactgcgtgtccttcaggaaaggaaagtcacccctattggc
ggaaccaaagaagttcctttggatgtccggatcataacggcgacacatcgtgacattact
gaccttgtaaaacggagagaattccgtgaggacctctactaccggttaaatgtatatcca
attgatgttccgcctctaagaaatagaaaagaagatatcccgcatctcattaagcatatt
tgccaaaagaacaattggagcataggcagcttagacatacaagatctgattaccagatta
agtgactatgactggccaggaaatataagggaattgaccaatttgatcgaacggctgcac
atcatgctcccggaacaacagtcagactacaccattttagaacagccttcagagctatta
aacttaaattattcttccgcttcagcgaatccgtttgaagaagacaaagtggaagaaaca
agcttaaacacacgtgagaaaatccaaagggatttaatgctggacgctttaaaacggaca
aatggaaatgtaacagcagcagcaaaattccttggcatcccacgaagtactttttataaa
aggctgaagaagtttggaatgtga
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