Bradyrhizobium ottawaense: CIT37_32335
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Entry
CIT37_32335 CDS
T05524
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
bot
Bradyrhizobium ottawaense
Pathway
bot01501
beta-Lactam resistance
bot01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
bot00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
CIT37_32335
01503 Cationic antimicrobial peptide (CAMP) resistance
CIT37_32335
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
bot02000
]
CIT37_32335
01504 Antimicrobial resistance genes [BR:
bot01504
]
CIT37_32335
Transporters [BR:
bot02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
CIT37_32335
Antimicrobial resistance genes [BR:
bot01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
CIT37_32335
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
SecD_SecF
Motif
Other DBs
NCBI-ProteinID:
AWL96294
UniProt:
A0A2U8PFM7
LinkDB
All DBs
Position
complement(4561532..4564678)
Genome browser
AA seq
1048 aa
AA seq
DB search
MSHFFIKRPIFAWVIAILIMLGGVLAIMRLPIAQYPQIAPTVVTITATYPGANAETAENS
VTKVIEQNMTGLDYLQYMSSSSTSTGQVQISLTFTNGADADIAQVQVQNKLQLATPLLPQ
VVQQQGIKVVKSSASFLMVLGFVSEDGRLAASDIADYVASSVNDPISRVAGVGQVTLFGA
EYAMRIWLDPDKLAKYNLMPSDVTAAIQTQNTQVTAGQLGGLPSVGGQQLNATITSQSRL
QTVEQFKDIILRTATTGQTVRIGDVARVELGSKSYDSAARYNGKPAAGMGISLATGANAV
ATSEAVKARVAQLSATMPEGLRVVYPYDTTPFVKLSIEKVIHTLFEAIALVFVVMFVFLQ
SWRATIIPTIAVPVVLLGTFGVLSLAGYSINTLTMFAMVLAIGLLVDDAIVVVENVERVM
AEEQLSPREATEKSMREITGALVGIGVVLSAVFIPMAFFNGSVGIIYRQFALTIVTAMLL
SVLVALILTPALCVTILKPPQHHGAQRGFFGLFNRGFDRMADGYQRTTGAAIRRIAGVMI
AFAAIVAGMVLLFQRLPSSFLPDEDQGTIMTLIQLPVGATSTRTLDVIKQVEHQYLDNEK
DAVDGVFAVSGFSFAGQGQNVGLAFVSLKPFDERKSPAASAQAVAGRAMGAFMKIRDAMV
FAVLPPSIPGFGNAGGFDVYLQDTGGNGHEALIQARNQLLGQLAADKRVAQARPNGQDDT
PQFNLDVDQAKATALGVNLSDLNTTLSAAWGGAYVNDFIDRGRVKQVYVQSDAPFRMDTS
DIGRWYVRNASGSMVPFSAVATDRWSFGSPRLERYNGVAAVELQGQAGPGISSGVAMQAV
EEQMARLPKGYGHEWTGLSFQERLTGSQTLYLYSISLLIVFLSLAALYESWSVPFAVMLT
VPIGVLGALLAATLFSQANDVYFQVGLLTTIGLASKNAILIVEFALEQIAAGRSLVDATL
HASRQRLRPILMTSLAFILGVLPLAVATGAGSASQNAVGIGVAGGMIAATVLGIFFVPAL
FVLVKRIFPGARADVATSNLPGVAEPAE
NT seq
3147 nt
NT seq
+upstream
nt +downstream
nt
atgtcccatttcttcatcaagcggccgatcttcgcctgggtcatcgccatcctgatcatg
ctgggcggcgtgctcgcgatcatgcggctgccgatcgcgcaatatccgcagatcgcgccg
accgtcgtcacgatcacggcgacctatcccggcgccaatgccgagaccgcggagaactcg
gtgaccaaggtcatcgagcagaacatgaccggtctcgactatctgcaatacatgtcgtcg
tcgagcacctcgacgggccaagtgcagatctcgctgaccttcaccaacggggccgatgcc
gacatcgcccaggtgcaggtgcagaacaagctgcagcttgcaactccgctgctgccgcag
gtcgtgcagcagcagggcatcaaggtcgtgaagtcctcggcgagcttcttgatggtgctg
ggtttcgtctccgaggacggtcggcttgccgccagcgacatcgccgactacgtggcctcc
tcggtcaacgatccgatcagtcgcgttgccggcgtcgggcaggtgacgttgttcggcgcc
gaatacgccatgcgcatctggctcgatcccgacaagctggccaaatacaatctgatgccc
agcgacgtgaccgcggcgatccagacccagaacacgcaggtgaccgccggccagctcggc
ggcctgccgtctgtcggcggccagcagctcaatgccaccatcacctcgcagagccgcctg
cagacggtcgagcaattcaaggacatcatcctgcgcacggccacgaccggtcagacggtc
cgtatcggcgacgtcgcgcgggtcgagctcggttcgaagtcctatgattccgccgcgcgc
tacaacggcaagccggccgcgggcatgggcatcagccttgcgaccggcgccaatgcggtc
gcgacctcggaagcggtgaaggcgcgcgttgcccagctcagcgccaccatgccggagggg
ctccgcgtcgtctacccctacgacaccacgcccttcgtcaagctgtcgatcgagaaggtg
atccacacgctgttcgaggcgatcgcgctggttttcgtcgtgatgttcgtgttcctgcag
agctggcgcgccaccatcattccgaccattgccgtgccggtggtgctgctcgggaccttc
ggcgtgctctcgctcgccggctattccatcaatacgctgacgatgttcgcgatggtgctg
gcgatcggcctcctggtcgacgatgccatcgtcgtggtcgaaaacgtcgagcgcgtgatg
gccgaggagcagcttagcccgcgcgaggcgaccgagaaatccatgcgcgagatcaccggg
gccctggtcgggatcggcgtcgtgctctcggccgtcttcatcccgatggcgttcttcaac
ggctcggtcggcatcatctaccggcagttcgcgctcaccatcgtcacggcgatgctgctg
tcggtgctggtcgcgctgatcctgacgccggctttgtgcgtcacgatcctgaagccgccg
caacaccatggcgcgcagcgcggcttcttcggcctgttcaaccgcggcttcgaccgcatg
gccgacggttatcagcgcaccacgggcgccgcgatcaggcgcatcgccggggtgatgatc
gccttcgcggcgatcgtcgccggcatggtcttgctgttccagcggctgccgagctcgttc
ctgcccgacgaggaccagggcacgatcatgaccctgatccagctcccggtcggcgcgacg
tcgacgcgcacgctcgacgtgatcaagcaggtcgagcatcaatatctcgacaacgagaag
gatgccgtcgacggcgtgttcgcggtcagcggcttcagcttcgcggggcaggggcagaat
gtcggcctcgccttcgtcagcctgaagccgttcgacgagcgcaagagtcctgcggcctcg
gcgcaggccgtggccggccgtgccatgggggcgttcatgaaaatccgcgacgccatggtg
ttcgcggtgctgccgccgtcgatccccggcttcggcaatgccggcggattcgacgtctat
ctccaggacaccggcggcaacggtcacgaggcgctgatccaggcgcgcaaccagctgctc
gggcagctcgcggcggacaagcgcgtggcgcaggcccggccgaacggtcaggacgatacg
ccgcaattcaacctcgacgtcgaccaggccaaggccaccgcgctcggcgtcaacctcagc
gatctcaacaccacattgtcggcggcctggggcggggcctatgtcaacgacttcatcgac
cgcggccgcgtcaagcaggtctatgtgcagagcgatgcgccgttccgcatggataccagc
gacatcggccgctggtatgtgcgcaacgcctcgggctcgatggtgccgttctcggcggtc
gctaccgatcgctggagctttggctcgccgcgcctcgagcgctacaacggcgttgccgcc
gtcgagttgcaggggcaggcggggccgggcatcagctcgggcgttgccatgcaggcggtg
gaggagcagatggccaggctgcccaagggctatggccacgaatggaccggattgtcgttc
caggaacggctcaccggcagccagacgctgtatctctattcgatctcgctgctgatcgtc
ttcctgagccttgcggcactctacgagagctggtccgtcccattcgcggtgatgctgacg
gtgccgatcggcgtgctcggcgcgctgctcgcggcgacgctgttcagccaggccaacgac
gtctatttccaggtcggtctgctcacgacgatcggtcttgcctcgaagaacgcgatcctg
atcgtcgaattcgcgctggagcagatcgcggccggccggagcctcgtcgatgccaccctg
cacgcgtcacgtcagcgcctgcgcccgatcctgatgacctcgctcgccttcatcctcggc
gtgttgccgctggcggtggcgaccggcgccggctcggccagccagaatgcggtcggcatc
ggcgtcgccggcggcatgatcgcggcgaccgtgctcggcatcttcttcgtgccagccctg
ttcgtgctggtgaagcggatattccccggtgcccgggcggacgtcgccacctcgaatctt
cctggggtcgcggagcccgcggaatag
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