Heyndrickxia oleronia: I5818_17195
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Entry
I5818_17195 CDS
T07202
Name
(GenBank) collagen-like protein
KO
K06236
collagen type I alpha
Organism
bou
Heyndrickxia oleronia
Pathway
bou04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
bou00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
I5818_17195
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
bou00536
]
I5818_17195
Glycosaminoglycan binding proteins [BR:
bou00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
I5818_17195
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
Kre9_KNH
Motif
Other DBs
NCBI-ProteinID:
QQZ03483
LinkDB
All DBs
Position
3437989..3442089
Genome browser
AA seq
1366 aa
AA seq
DB search
MSIYKIQSSYNESVVTALSFLSYAIENFLWKGGNLLTIKNLIVNGDFENGILTPWLSTNS
LITNLYTHSGYYSALLQGGSVNSYISQFVSINSFERFEFLISLAKTNASPSPPLALLIIY
YDDSLNFLNYGLITNITPDKIPNVQENQTWLEIYQTTGLAPLDATYALVVVNKLPLAGSS
DIVIDDIELLSIEGSGSTGATGVTGATGATGATGITGPTGITGSTGVTGATGITGPTGVT
GLTGVTGPTGVTGATGTTGVTGPTGISGPMGVTGATGATGVTGPTGITGPTGVSGPTGLT
GTTGVTGATGITGPTGLTGVTGVTGPTGVTGATGITGPTGVTGSTGITGPTGITGATGVS
GATGITGPTGATGPTGITGPTGVTGSTGVTGATGVTGLTGVTGPTGVTGPTGLTGPTGVT
GATGATGPAGVTGATGATGITGSTGVTGATGVTGPTGVTGATGVTGPTGVTGATGVTGPP
GVTGATGITGPTGVTGPTGITGPTGITGATGVSGATGITGPTGVTGATGITGTTGVTGAT
GIIGPTGVTGDTGATGPTGITGATGATGPTGVTGTTGATGTTGVTGTTGATGPAGVTGAT
GITGPTGVTGATGITGPTGVTGPTGLTGPTGVTGVTGATGPAGVTGDRGITGPTGVTGAT
GVTGPTGVIGATGITGPMGVTGVTGITGPTGATGATGVTGVTGVTGPTGITGPTGVTGAT
GITGPTGVTGATGITGPTGVTGVTGATGTTGPTGVTGATGITGPTGVTGATGITGPTGVT
GATGATGPTGPTGVTGTTGATGPAGVTGATGVTGPTGVTGPTGLTGPTGVTGATGATGPA
GVTGDRGITGPTGVTGATGVTGPTGVTGATGITGPMGVTGVTGITGPTGATGATGATGPT
GITGPTGVTGVTGVTGATGVTGLTGVTGPTGGSGPTGLTGPTGVTGATGATGPAGVTGAT
GVTGTTGVTGITGPTGVTGATGITGSTGVTGATGVTGPTGVTGTTGITGPTGVTGATGVT
GPTGVTGATGATGPSGVTGATGITGPMGVTGVTGITGPTGVTGVTGTTGPTGGSGPTGLT
GPTGVTGATGITGPSGVTGATGVTGPTGVTGATGITGPTGVTGPTGVTGVTGVTGPTGVT
GATGITGPTGVTGATGITGSTGARGPTGVRGPTGARGPTGARGPTGARGPTGIRGPTGAR
GPTGVRGPTGVRGPTGVRGPSGVRGPTGARGPTGTSPRLGFQNNTGSIAITPINTEVTVA
SVTATPLANQNIKIDSALTIEVTTTANNSFTIEIRLYRGTTLLQTRALIRNQPGAGTARF
NMADTYVDTAPATASTTYQIRVISTSESNVTAVNAINRNLNLLVFT
NT seq
4101 nt
NT seq
+upstream
nt +downstream
nt
atgtccatttacaaaatacaatcttcctataatgaaagtgtcgttacagcactatcattc
ctttcatatgctatagagaactttttatggaaaggaggtaacctgttgactataaaaaat
ttaatagtaaatggagattttgaaaatggaatattaactccttggttgtccactaattcc
ttaattaccaatctttatacacattctggatattattcagctcttttacagggcggctct
gtaaattcatatatcagtcaatttgtatccattaattcctttgagcggtttgagttctta
atctctcttgcaaaaactaacgcttcaccttctcctcctttggccttattgataatttat
tatgatgattcattaaattttttaaattatggattaataacgaatataactccagataaa
atacctaatgttcaagaaaatcaaacatggctagaaatctaccaaacaactggactagct
ccattggatgctacctatgcactcgttgttgtaaacaaacttccattagcaggaagttca
gatattgttattgacgatattgaattattatctatcgaaggttctggaagtactggggct
accggcgttactggagccacgggtgctactggggctaccggcattactggaccaacaggg
atcactgggtcgaccggcgtcactggcgcgacaggcattactggacctacaggcgttact
gggctgactggtgtcactggaccgactggtgttactggagccacgggcactacgggcgtt
actggacctacaggcatttctggaccgatgggagttactggtgccacgggcgctacgggc
gttactggacctacagggatcactgggccgaccggcgtctctgggccgacggggcttact
ggaactacgggagttactggggctacggggatcactggaccaaccggccttactggggtc
acgggggttactggacctacgggcgttactggcgccacaggaattaccggaccgaccggc
gttactggatctactggcattactggaccaacagggatcactggggctaccggcgtctct
ggcgcgacaggcattaccggaccgaccggcgctactggacctacagggatcactgggccg
accggcgttactggatctactggtgttactggcgctaccggcgttactgggctcacgggc
gttaccggaccgaccggcgtcactgggccgacggggcttactggacctactggtgttact
ggagccacgggcgctactggaccagctggtgttactggagccacgggcgctacaggcatt
accggatctactggtgttactggggctacaggcgtcactggacctacgggcgttactggc
gctacgggcgttaccggacctactggtgttactggagccacgggggttactggacctccg
ggcgttactggcgccacaggaattaccggaccgaccggcgttactggaccgactggcatt
actggaccaacagggatcactggggctaccggcgtctctggcgcgacaggcattaccgga
ccgaccggcgtcactggcgctacgggcattactggaactactggtgtcactggagccacg
ggcattatcggaccgaccggcgttactggagacacaggcgctactggacctactggtatt
actggagccacgggcgctactggacctactggtgttactggaaccacgggcgctactgga
actactggtgttactggaaccacgggcgctactggaccggccggcgtcactggcgcaaca
ggcattactggacctacgggcgttactggagcgacaggcattactggaccgaccggcgtc
actgggccgacggggcttactggacctactggtgttactggagtcacgggcgctactgga
ccagctggtgttactggggacaggggcatcactgggccaactggtgttactggagccacg
ggcgttaccggaccgaccggtgtcataggcgcgacaggcattactggaccgatgggggtt
actggagtcacgggcattaccggaccgaccggcgctactggagccacgggcgttactggc
gtcacaggcgttaccggacctactggcattactgggccgaccggcgttacgggcgctaca
ggcattactggacctactggtgtcactggagccacgggcatcactgggccgactggtgtc
acgggcgttactggagccacgggcactactgggccgaccggcgtcactggcgctactggc
attaccggaccgaccggcgtcactggcgctacgggcattactggacctactggtgttact
ggcgctacgggcgctactggacctactggacctactggtgttactggaaccacgggcgct
actggaccggccggcgtcactggcgcaacaggcgttactggaccgaccggcgtcactggg
ccgacggggcttactggacctactggtgttactggagctacgggcgctactggaccagct
ggtgttactggggacaggggcatcactgggccaactggtgttactggagccacgggcgtt
accggaccgaccggtgtcacaggcgcgacaggcattactggaccgatgggggttactgga
gtcacgggcattaccggaccgaccggcgctactggagccacgggcgctactggacctaca
gggatcactgggccgaccggcgttacgggcgttactggtgttactggcgctaccggcgtt
actgggctcacgggcgttaccggaccgaccggcggctctgggccgacggggcttactgga
cctactggtgttactggagccacgggcgctactggaccagctggtgttactggagccacg
ggagttacgggcacaacgggagttacgggcattactggaccgaccggcgtcacgggcgct
acaggcattaccggatctactggtgttactggggctacaggcgtcactggacctactggc
gttactggcactacaggcattaccggaccgaccggcgttactggcgctacgggcgttacc
ggacctactggtgttactggagccacgggggctactggaccttccggtgtcacgggcgct
acaggcattactggaccgatgggggttactggagtcacgggcattaccggaccgaccggc
gttactggcgtcacgggcactactgggccgaccggcggctctgggccgacggggcttact
ggaccgactggtgttactggggctacggggatcactggaccaagcggcgttacgggcgcc
acgggcgttactgggcctactggtgttactggcgctacaggcattactgggccgaccggc
gttactgggccgaccggcgttactggggtcacgggggttaccggaccgaccggcgttact
ggcgctacaggcatcactgggccgactggtgtcactggcgccacaggcattaccggatct
actggtgctagaggaccgactggtgtgagaggaccgactggtgctagaggaccgactggt
gctagaggaccgactggtgctagaggacctaccggtattagaggacctaccggtgctaga
ggaccgactggtgtgagaggaccgactggtgtgagaggaccgactggtgtgagaggaccg
tccggtgtgagaggaccgaccggtgctagaggaccgactggaacatccccaagattagga
tttcaaaataatacaggttctattgcaataacacctataaataccgaagttactgttgcc
agtgttacagcaacaccattagcaaatcaaaatatcaagattgatagtgcattgacgatt
gaagtaacaaccactgctaacaacagttttacaattgagattcgattgtatcgtggcacc
acactgctccaaacaagagcgttaatacgaaatcagccaggagcaggtacagcaagattt
aatatggcagatacctatgtggatactgcacctgctactgcatctacaacctatcagatc
cgagttataagtacgtcggaaagtaatgttacagctgttaatgcaattaaccgaaattta
aacctgcttgtcttcacctaa
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