Bradyrhizobium pachyrhizi: QA639_13700
Help
Entry
QA639_13700 CDS
T09303
Name
(GenBank) helicase-related protein
KO
K03723
transcription-repair coupling factor (superfamily II helicase) [EC:
5.6.2.4
]
Organism
bpah
Bradyrhizobium pachyrhizi
Pathway
bpah03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
bpah00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
QA639_13700
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bpah03400
]
QA639_13700
Enzymes [BR:
bpah01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
QA639_13700
DNA repair and recombination proteins [BR:
bpah03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
TRCF (transcription-repair coupling factor)
QA639_13700
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
TRCF
UvrB_inter
ResIII
CarD_TRCF_RID
SecA_DEAD
AAA_25
AAA_30
RecG_dom3_C
UB2H
AAA_16
AAA_22
ATPase_2
NTPase_1
Motif
Other DBs
NCBI-ProteinID:
WFU58474
LinkDB
All DBs
Position
2956803..2959808
Genome browser
AA seq
1001 aa
AA seq
DB search
MLHSLDPSLEVLVFPRLNTLPFDGLEPSREIAGRRSSVLRRLARSKKPVFLVSTAEAIME
RLPLPASSARLSISLKVGAGYSEQELKDRLEALGYDLDEEADYPGSALFHGMTFEVFPAG
ALGPFRIEHSGGVIRRIAGVDPDEHDVVFDAEELHIDPMSERIALGGKRVQRAALPDYCE
RARWIADAGVSGHADSWLSTIKEAAGRREAEREYLGPADWKRLTRRMSSLPRKAAFTATP
DFSKVASSRKALRAFVADTERAGSRLLFVAAVEDDLRAMERMSGIKAERFANWNEAAKGR
GGAGALLADFDTGFIGSGRKPLVVVTATDVLGSRAHHPQPMARAWSSAFDHPDVPERDAV
VVHLQRGLAVLDGLQTFDVGKGSSREMIRLAFAGDDAVLVPPADLALIWPYAAELGKLAL
DRADGSTWWTRRTKAEQEIQTAAKALAKHIAQRRRRRAPKLVAPGPAYERFVARFPYFTT
VDQAKAIRDVLDDLASGHPMDRVVCGDVGFGKTEVALRAAAAVALSGKQVAVVVPTTVLA
RQHVATFRKRFAPLGIEVGSLSRATSSPEMKETKEGLRSGKVKVVVGTQAIASKDVKFAK
LSLVIIDEEQHFGAAEKAKLSGLAKGVHTLWMSATPIPRTLAAGLAGFRELSVIASPPVH
RLPVATRIAPLSDAAIAAALLREQRRHGQSFLICPRIQDLDPMLARVQSMAPELRIVCLH
GKLPADEIDDRMMSFVEGEADVLLATNIVESGLDIPRANTIVVCWPEKFGLAQLHQLRGR
VGRGGTRAFAYMLTESSSEQSGRRLAVLEEFSRPGAGFAISERDLDLRGAGDLLSERQSG
HVQVFGPVLYSHLLKQASEKTNDRSADLWVPDLNLPLADLLPRSYVQSESVRLEIYGRAA
RCRSEDDLEDLEEETSRRFGRLPSAGRDFFAAARLRIDCKRRGIVRLDVGPEAVAATFLP
GRLPKSRARSLERDGDRVFYSDNIHEPPFERIEDLLDILDE
NT seq
3006 nt
NT seq
+upstream
nt +downstream
nt
gtgctgcattcgctcgatccttcgctcgaggtgctggtgttcccgaggctgaataccttg
ccctttgacgggctggagccgtcacgagagatcgccggccggcgcagttcggtgttgagg
cgcctcgcccggagcaagaagccggtcttcctggtatcgacggcggaggcgatcatggag
cggttgccgttgcccgccagttcggcgcgcctcagcatcagcttgaaggtgggggcgggc
tactccgagcaggaactcaaggatcgtctggaagctctgggatacgatctcgacgaagag
gcggattatcccggcagcgctctgttccacggaatgacgttcgaggtatttcccgcgggc
gcgctggggccgttcagaattgagcattccggtggcgtgatccgcagaatcgccggtgtc
gatccggacgagcacgacgtcgtgttcgacgcggaggaactgcacatcgaccccatgtcc
gaacggatcgcgttgggaggcaagcgggtgcagcgggcggcgctgccggattattgtgag
cgtgcgcgctggatcgcggacgcgggcgtgtcaggccacgctgatagctggctgagcacg
atcaaggaggcggccggccgcagggaggcggagcgcgagtatctggggcccgctgactgg
aaacggctgaccagacggatgagctcgctgccccgaaaggcagctttcaccgccacgccc
gacttctcgaaggtcgcctcgtcgcggaaagcgcttcgcgcatttgtcgccgacaccgag
cgcgccggatcgcggctgctgtttgtcgcggcggtcgaggatgacctgcgcgcgatggag
cgaatgagcgggatcaaggcggagcgcttcgcaaactggaacgaggcggcgaaggggcga
ggcggcgcaggcgcgctgctggccgacttcgacaccggcttcatcggctcagggcgcaag
ccgctcgtcgtcgtgacggcgaccgacgtgctcggcagcagggcgcatcatccgcagcct
atggcgagagcctggagttcggctttcgatcatcccgacgtgccggagcgcgacgcggtc
gtcgtgcatctgcagcgcgggctggccgtgctcgatggcttgcagaccttcgatgtggga
aagggatcatcgcgcgagatgatcaggctggcattcgcgggggacgatgccgtcctcgtt
ccgccggccgatcttgcgctgatctggccgtatgccgcggagctcggcaagctggcactg
gacagggccgatggcagtacgtggtggacgcgccgaaccaaggcggagcaggaaattcag
actgccgccaaggcgcttgccaaacacatcgcgcaacggcgccgccggcgcgctcccaag
ctggtcgctcccggtcccgcatatgagcggttcgtcgcgcgctttccatatttcacgacc
gtcgaccaggcgaaggcaattcgcgacgtgctggatgaccttgcctccggtcatccgatg
gatcgggtcgtctgcggcgacgtcgggtttggcaagaccgaggtggcattgcgcgcggcg
gcggccgttgcgctgtcgggcaagcaggttgccgtggtcgtgccgacgaccgttctggca
aggcagcacgtcgcaaccttccgcaaacggtttgccccgcttggcatcgaagtgggaagc
ctgtcgcgggcgacgtcgtctccggagatgaaggagaccaaggagggcctgcgaagcggc
aaggtgaaggtcgtggtcggcacgcaggcgatcgcatcgaaggacgtgaagttcgccaag
ttgagtctggtcatcatcgacgaggaacagcacttcggggcggcggagaaggcgaagctt
tcaggcctggcgaagggcgtccatacgctgtggatgagtgccacgccgattccgcgcacg
cttgcggcgggccttgcgggattcagggagcttagcgtgatcgcatccccgcccgttcat
cggcttccggtcgcgaccaggatcgctccgctctcggacgccgccattgccgccgcattg
ctgcgcgagcagcgacgtcacgggcaaagctttctgatctgtccgcgcatccaggatctg
gatccgatgctggcgcgcgtgcagtcgatggccccggagctccgcatcgtctgcctgcac
ggcaagctgcccgccgacgaaatcgacgatcgaatgatgagtttcgtcgaaggcgaggcg
gacgtcctcctggcgaccaacatcgtggaaagcggtctcgacatccccagggcgaacacc
atcgtggtgtgctggccggaaaagttcggtctggcgcagctccaccagctcagaggccgt
gtgggacgcggcgggacacgcgccttcgcatacatgctgaccgaatccagttcggaacaa
tccgggaggcgtttggccgttctggaggagttcagcagaccgggcgccggtttcgcgatc
agcgagcgggatctcgacctcagaggcgccggggatctgctttcggaacggcaatccggc
cacgtgcaggttttcggtccggtgctatacagccatcttctcaagcaagcctcggagaag
accaacgaccggtccgccgatctgtgggtgcccgatctcaaccttccgctcgcggatttg
ctgcccaggagctatgtgcaatcggaatccgtgcggcttgaaatctatggccgtgccgcg
aggtgccggagcgaagacgatctggaagatctcgaggaagagacctcgcgacgcttcggc
aggctgccgtcggccggtcgggacttcttcgccgcggcgaggctcaggatcgattgcaag
cggcgagggatcgtgaggctcgatgtcggcccggaggccgtcgcggcgacgttccttccc
gggaggctgcccaaatccagagcacgttcgctcgagcgcgatggcgatcgcgtgttctat
tcggacaacatacacgagccgcctttcgagcggatcgaggatctcctggacattttggac
gagtga
DBGET
integrated database retrieval system
