Borrelia parkeri: X966_04195
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Entry
X966_04195 CDS
T03987
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06179
23S rRNA pseudouridine955/2504/2580 synthase [EC:
5.4.99.24
]
Organism
bpak
Borrelia parkeri
Brite
KEGG Orthology (KO) [BR:
bpak00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bpak03009
]
X966_04195
Enzymes [BR:
bpak01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.24 23S rRNA pseudouridine955/2504/2580 synthase
X966_04195
Ribosome biogenesis [BR:
bpak03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
X966_04195
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
AHE63124
LinkDB
All DBs
Position
871557..872519
Genome browser
AA seq
320 aa
AA seq
DB search
MLSLNIRNVGKYSVINVLKNDDGKRLDAVLIKFLKIPKSKIIRHIRNGDILLNNLKVSFS
HRIFKDDKIYLYKPLLQGLSLNRITVKDESAILRDIKKRIVYEDADLLVINKRKGTLVHG
DKYSLDTLINAYLLDENLGSLSFKPSAVHRLDRNTSGLIIFAKNINSARILSQAFSSGVV
IKKYLALLDGVITKPLTYKNFLYRDKISRKTFVINDIDKCNAVTDIKPILVSKSSTLAEV
SIKTGFTHQIRAQCAFNRHALINDKKYDSQFVKTNYFLHSFLIKFNQSLFLRNEFFVEPS
SDFLKQISNIFGVYDFKGFI
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atgttgtctttaaatattaggaatgttggaaaatatagtgttattaatgttctaaagaat
gacgatggtaaaagacttgatgcagtgttgataaagtttttaaaaatccctaaatctaaa
ataatcaggcatattagaaatggagatattcttttaaataatttaaaggtttctttttcg
catagaatttttaaggatgataaaatttatttgtataaacctttactacagggtttgagt
ttaaacaggataacagtcaaagatgagtctgctatattaagagatataaagaaaagaata
gtatatgaggatgcggatttgcttgtaattaataagaggaagggaactttggttcatggg
gataaatattcacttgatactttaattaatgcttatcttttagatgaaaatcttggctct
cttagttttaaaccctcagctgtgcatagattagatagaaatacttcaggacttattatt
tttgcaaaaaatataaattctgcaagaattttaagtcaggcatttagtagtggtgttgtt
attaaaaagtatttggctttacttgatggtgtgattacaaaacctttgacttataaaaat
tttttatatcgagataagatttcaagaaaaacttttgttatcaatgatatagataaatgt
aatgctgtaactgatattaaaccaattttagtgtctaagtcttcaacacttgcggaggtg
tcaattaagacgggatttacacatcaaataagagcacaatgtgcttttaatagacatgcc
ttgattaatgataaaaaatatgattctcaatttgtaaaaaccaattactttttacattct
tttttgataaaatttaaccagtcattatttttaagaaatgaattttttgttgaacctagt
tcagattttttaaaacagataagtaatatttttggtgtatatgattttaagggatttatt
taa
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