Bordetella parapertussis Bpp5: BN117_0170
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Entry
BN117_0170 CDS
T02297
Symbol
rfbC
Name
(RefSeq) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
bpar
Bordetella parapertussis Bpp5
Pathway
bpar00521
Streptomycin biosynthesis
bpar00523
Polyketide sugar unit biosynthesis
bpar00541
O-Antigen nucleotide sugar biosynthesis
bpar01100
Metabolic pathways
bpar01110
Biosynthesis of secondary metabolites
bpar01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
bpar00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
BN117_0170 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
BN117_0170 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
BN117_0170 (rfbC)
Enzymes [BR:
bpar01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
BN117_0170 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Mac-1
Motif
Other DBs
NCBI-GeneID:
13888206
NCBI-ProteinID:
YP_006894254
UniProt:
K0M9W0
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Position
complement(176965..177513)
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AA seq
182 aa
AA seq
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MKLTPLAIADVVLIEPQVFGDERGCFFESFNQDRLDAQLGRRIRFVQDNHSCSRAGVLRG
LHYQILHPQAKLVRVVAGEAYDVAVDLRRGSPTFGRWTGAYLSARNRHQLWIPEGFAHGF
LALSDDTECLYKATDYYAPEHERCVRWDDPQLKVDWPLQGQAPILSVKDRQGVALARADT
YA
NT seq
549 nt
NT seq
+upstream
nt +downstream
nt
atgaaactcacccccttggccatcgcggacgtcgtgctgatcgaaccccaagtgttcggc
gacgagcgcggctgcttcttcgagagcttcaaccaggaccgcctggacgcgcaactgggg
cggcgcatccgcttcgtgcaggacaatcactcatgctcgcgcgcgggggtgctgcgcggc
ctgcactaccagatcctgcatccgcaggccaagctggtgcgcgtggtggcgggcgaagcc
tatgacgtggcggtggacctgcgccgcggctcgcccaccttcgggcgctggaccggcgcc
tacctgtcggcgcgcaaccggcaccagctgtggattccggaagggtttgcgcacggcttc
ctggcgttgtccgacgataccgagtgcctgtacaaggccaccgactactacgcgcccgaa
catgagcgctgcgtgcgctgggacgacccgcaactcaaggtggactggccgctgcagggc
caagcgcccatcctgtcggtgaaagaccgccagggcgtggcgctggcgcgggccgatacc
tatgcgtag
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