Bordetella parapertussis Bpp5: BN117_3281
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Entry
BN117_3281 CDS
T02297
Symbol
rluC
Name
(RefSeq) ribosomal large subunit pseudouridine synthase C
KO
K06179
23S rRNA pseudouridine955/2504/2580 synthase [EC:
5.4.99.24
]
Organism
bpar
Bordetella parapertussis Bpp5
Brite
KEGG Orthology (KO) [BR:
bpar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bpar03009
]
BN117_3281 (rluC)
Enzymes [BR:
bpar01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.24 23S rRNA pseudouridine955/2504/2580 synthase
BN117_3281 (rluC)
Ribosome biogenesis [BR:
bpar03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
BN117_3281 (rluC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-GeneID:
13891318
NCBI-ProteinID:
YP_006897091
UniProt:
K0MIK7
LinkDB
All DBs
Position
complement(3534579..3535544)
Genome browser
AA seq
321 aa
AA seq
DB search
MSLSAMRKETSPGTTPPAVRMLAIGPEHDGQRIDNFLLRLCKGVPKSHIYKAIRGGEVRV
NKGRISAEYRLVEGDVVRVPPLRLPDPGAARPVPGAEFPVVYEDDALLVIDKPAGVAVHG
GSGVSFGVIEQLRAARPQARFLELVHRLDRETSGLLMLAKKRSALLALHAMLREGKGDKH
YLALVEGDWVNDRQHIRLALTKWTTQSGERRVRVDQAGQAAHTIVTLRKRFGGYSLVDAE
LRTGRTHQIRVHLASSGFPIVGDDKYGTDETRAAFARRGFGRMFLHAHQLTLPHPLTGET
LRLTADLPPACLKLLKQLETA
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atgtcgctttccgcaatgcgcaaagaaacttcccctggcaccacgccacccgctgtccgc
atgctggcaatcggccccgagcacgatggccagcgcatcgataatttcctgctcaggctg
tgcaagggcgtccccaagagccatatctacaaggccatccgcggcggtgaagtgcgggta
aacaagggacgcatctcggccgaataccgcctcgtcgagggggacgtcgtacgggtaccg
ccgctgcgcctgcccgacccgggcgcggccaggccggttcccggcgcggaatttcccgtc
gtgtacgaagacgatgcgctgctggtcatcgacaagccggccggcgtggcggtgcatggc
ggcagcggcgtgtccttcggcgtcatcgagcagttgcgggccgcccgtccgcaggcccgc
ttcctggagctggtgcaccgcctggaccgcgagacctccggcctgctgatgctcgccaag
aaacgcagcgccctgctggcgctgcacgccatgctgcgcgaaggcaagggcgacaagcac
tatctggcgctggtggagggcgactgggtcaacgaccgccagcacatccgcctggcgctg
accaaatggaccacccagtccggcgagcgccgcgtacgggtcgaccaggcggggcaggcc
gcccacaccattgtcacgctcaggaagcgttttggcggttacagtctggtcgacgccgag
ctgcgcaccggtcgcacccaccagatccgcgtgcatctggcgtccagcggctttcccatc
gtcggcgatgataaatacgggacggatgaaacccgggccgcgttcgcgcggcgcgggttc
ggacgcatgttcctgcacgcacaccagctgacgctgcctcaccccctcacgggagaaacc
ttgcgcttgacggcggacctgccgcccgcctgcctcaagctgttgaaacaactggagacg
gcctga
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integrated database retrieval system
