Bombus pascuorum (common carder bee): 132916881
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Entry
132916881 CDS
T09597
Name
(RefSeq) general transcription factor IIH subunit 2
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
bpas
Bombus pascuorum (common carder bee)
Pathway
bpas03022
Basal transcription factors
bpas03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
bpas00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
132916881
09124 Replication and repair
03420 Nucleotide excision repair
132916881
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bpas03021
]
132916881
03400 DNA repair and recombination proteins [BR:
bpas03400
]
132916881
Transcription machinery [BR:
bpas03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
132916881
DNA repair and recombination proteins [BR:
bpas03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
132916881
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ssl1
C1_4
VWA_2
IBR
VWA
DZR
Motif
Other DBs
NCBI-GeneID:
132916881
NCBI-ProteinID:
XP_060833284
EnsemblRapid:
ENSBPAG00000004342
LinkDB
All DBs
Position
2:complement(18962773..19045821)
Genome browser
AA seq
400 aa
AA seq
DB search
MADEEEEKEYRWETGYEKTWEAIKEDDHGLLEASVADIIHNAKRKRQMEKKVGARLGMMR
HLYVILDASESMSLQDLKPTRFLCSLKLLEDFIEEFFYQNPISQLGVIITRNKRAEKVSE
LAGNSKKHVKEVQSMQQIAPVGEPSLQNSIELALKSLRLLPSHASKEILIIVGALTTCDP
GDINETIQNMKTDSVRCSVIGLAAELYICKRMATATGGEHGVALDDKHYKEQLNMHIDPP
PAATRLDAALVKMGFPHHALHSSANDSAMAVCMCHAESSDESVKLLSTGYLCPQCLSKHC
ELPVECRACGLTLVSAPHLARSYHYLFPVESFKEVVFSGTPSTCYGCQKILSQKDKKVYI
CNKCNETFCLDCEIFIHESLHTCPGCATNPDTYQKSTDRN
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atggctgatgaagaagaagagaaagagtatagatgggagactggttatgaaaagacatgg
gaagcaatcaaagaagatgatcatggattgttggaagcatcagttgcagatattattcac
aatgccaaaagaaaacgtcaaatggaaaagaaggttggtgccagattaggaatgatgagg
catctttatgtaattcttgatgcttctgaatcaatgtcacttcaagatttgaaaccaact
cgttttctatgttccttgaagctgttagaagattttattgaagaattcttttatcaaaat
cctataagtcagttaggagtaattatcacaaggaataagagagcagaaaaagtaagcgaa
ttagctggaaattctaaaaaacatgtgaaggaagtacaaagcatgcaacaaattgcacca
gtaggtgaaccttcgttgcaaaactccatagagttagctttgaagtcattacgtctccta
ccatcacatgctagcaaagaaatacttataatagtaggagcacttacaacatgtgatcca
ggagatatcaatgaaactatacaaaacatgaagacagattctgtcaggtgcagtgtgata
ggtttggctgctgaactatatatttgtaaaagaatggcaacagcaactggtggagagcat
ggtgttgcattggatgataaacattacaaggaacagttaaatatgcacatagatcctcct
ccagctgcaactaggttagatgctgctcttgtaaaaatgggtttccctcatcatgcatta
cattcttctgcaaatgattcagctatggcagtttgcatgtgtcatgcagaaagttcagat
gaatctgttaaacttcttagtacaggatatctctgtcctcagtgtttgagcaaacattgt
gaacttccagtagaatgcagagcatgtggattaacattggtgtctgctccacatttagca
cggtcctatcattatttattccctgttgaatcttttaaggaagttgtattcagtggaact
ccttcaacttgttatggttgtcagaagatattgtctcaaaaagacaagaaggtatacatt
tgtaataaatgtaatgaaacattttgtttagactgtgaaatatttattcatgaatcttta
catacatgtcctggctgtgctaccaatccagatacatatcaaaagtccacagatagaaat
taa
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